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PI0013837 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013837
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBeta-galactosidase
Genome locationchr09:6282366..6282795
RNA-Seq ExpressionPI0013837
SyntenyPI0013837
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0043564 - Ku70:Ku80 complex (cellular component)
GO:0003678 - DNA helicase activity (molecular function)
GO:0003684 - damaged DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
GO:0042162 - telomeric DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039144.1 Beta-galactosidase [Cucumis melo var. makuwa]6.9e-3055.91Show/hide
Query:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFS---------------
        MDLCRE VW + NDS QY ++EE+DR+Y+FL GLN  FD V G ILGQRP+ SLMEVC +VR+EEDRT+ M VLTTP IDSAAFS               
Subjt:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFS---------------

Query:  -----ARNNDIPRSGVGSYMAVPQKVK
             ARNN  PR  VG++  VPQ++K
Subjt:  -----ARNNDIPRSGVGSYMAVPQKVK
KAA0058176.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.0e-3060.34Show/hide
Query:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNNDIPRSGVGSYM
        MDLCRE VW +PND  QY ++EE D +Y+FL GLN  FD V G+ILGQRP+ SLMEVC +VR+EEDRT+ M VLT P IDSAAFSA     PR  VG   
Subjt:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNNDIPRSGVGSYM

Query:  AVPQKVKNVLPTTNRT
         VPQ+V+N   T N+T
Subjt:  AVPQKVKNVLPTTNRT
TYJ97685.1 Beta-galactosidase [Cucumis melo var. makuwa]2.2e-2870Show/hide
Query:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNND
        MDLCRE VW +PNDS QY ++EE DR+Y+FL GLN  FD V GHILGQRP+ SLMEVC +VR+EEDRT+ M VLTTP IDSAAFSAR+++
Subjt:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNND
TYK26969.1 Beta-galactosidase [Cucumis melo var. makuwa]6.9e-3055.91Show/hide
Query:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFS---------------
        MDLCRE VW + NDS QY ++EE+DR+Y+FL GLN  FD V G ILGQRP+ SLMEVC +VR+EEDRT+ M VLTTP IDSAAFS               
Subjt:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFS---------------

Query:  -----ARNNDIPRSGVGSYMAVPQKVK
             ARNN  PR  VG++  VPQ++K
Subjt:  -----ARNNDIPRSGVGSYMAVPQKVK
XP_031741782.1 uncharacterized protein LOC116403961 [Cucumis sativus]1.5e-3759.86Show/hide
Query:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARN------------
        MDLCRELVW  P D VQY R+EE DRIY+FL GLN  FD+V G ILGQRPI SLMEVCS++R+EEDRTS M +  TP IDSAAFSAR+            
Subjt:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARN------------

Query:  ---------NDIPRSGVGSYMAVPQKVKNVLPTTNRTPNGYM
                 N IP++ VGSYM VPQ+V+N LPTTNRT  G M
Subjt:  ---------NDIPRSGVGSYMAVPQKVKNVLPTTNRTPNGYM
TrEMBL top hitse value%identityAlignment
A0A5A7T6N2 Beta-galactosidase3.3e-3055.91Show/hide
Query:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFS---------------
        MDLCRE VW + NDS QY ++EE+DR+Y+FL GLN  FD V G ILGQRP+ SLMEVC +VR+EEDRT+ M VLTTP IDSAAFS               
Subjt:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFS---------------

Query:  -----ARNNDIPRSGVGSYMAVPQKVK
             ARNN  PR  VG++  VPQ++K
Subjt:  -----ARNNDIPRSGVGSYMAVPQKVK
A0A5A7TZI1 Beta-galactosidase1.8e-2870Show/hide
Query:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNND
        MDLCRE VW +PNDS QY ++EE DR+Y+FLVGLN+ FD V G ILGQRP+ SLMEVC +VR+EEDRT+ M VLTTP IDSAAFSAR+++
Subjt:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNND
A0A5A7UVH3 Retrovirus-related Pol polyprotein from transposon TNT 1-944.4e-3060.34Show/hide
Query:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNNDIPRSGVGSYM
        MDLCRE VW +PND  QY ++EE D +Y+FL GLN  FD V G+ILGQRP+ SLMEVC +VR+EEDRT+ M VLT P IDSAAFSA     PR  VG   
Subjt:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNNDIPRSGVGSYM

Query:  AVPQKVKNVLPTTNRT
         VPQ+V+N   T N+T
Subjt:  AVPQKVKNVLPTTNRT
A0A5D3BGT3 Beta-galactosidase1.1e-2870Show/hide
Query:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNND
        MDLCRE VW +PNDS QY ++EE DR+Y+FL GLN  FD V GHILGQRP+ SLMEVC +VR+EEDRT+ M VLTTP IDSAAFSAR+++
Subjt:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNND
A0A5D3DU34 Beta-galactosidase3.3e-3055.91Show/hide
Query:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFS---------------
        MDLCRE VW + NDS QY ++EE+DR+Y+FL GLN  FD V G ILGQRP+ SLMEVC +VR+EEDRT+ M VLTTP IDSAAFS               
Subjt:  MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFS---------------

Query:  -----ARNNDIPRSGVGSYMAVPQKVK
             ARNN  PR  VG++  VPQ++K
Subjt:  -----ARNNDIPRSGVGSYMAVPQKVK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTTGCAGAGAACTTGTTTGGAGCAGTCCTAATGATAGTGTGCAGTACTTAAGGGTCGAAGAGATTGACAGGATTTATAACTTTCTTGTTGGTCTTAACTCTAT
GTTTGATATAGTCCTTGGGCATATACTAGGTCAGAGACCGATTTCCTCCCTGATGGAGGTCTGTTCTAAAGTCCGAATTGAGGAGGATCGTACAAGTACTATGAATGTTT
TGACAACCCCTTTTATTGACTCTGCTGCTTTCAGCGCAAGAAACAATGACATACCAAGGAGCGGTGTTGGAAGTTACATGGCCGTTCCCCAGAAGGTAAAAAACGTCCTT
CCAACGACAAATAGAACACCGAACGGGTATATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTTGCAGAGAACTTGTTTGGAGCAGTCCTAATGATAGTGTGCAGTACTTAAGGGTCGAAGAGATTGACAGGATTTATAACTTTCTTGTTGGTCTTAACTCTAT
GTTTGATATAGTCCTTGGGCATATACTAGGTCAGAGACCGATTTCCTCCCTGATGGAGGTCTGTTCTAAAGTCCGAATTGAGGAGGATCGTACAAGTACTATGAATGTTT
TGACAACCCCTTTTATTGACTCTGCTGCTTTCAGCGCAAGAAACAATGACATACCAAGGAGCGGTGTTGGAAGTTACATGGCCGTTCCCCAGAAGGTAAAAAACGTCCTT
CCAACGACAAATAGAACACCGAACGGGTATATGTGA
Protein sequenceShow/hide protein sequence
MDLCRELVWSSPNDSVQYLRVEEIDRIYNFLVGLNSMFDIVLGHILGQRPISSLMEVCSKVRIEEDRTSTMNVLTTPFIDSAAFSARNNDIPRSGVGSYMAVPQKVKNVL
PTTNRTPNGYM