; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013846 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013846
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA-binding protein BRN1
Genome locationchr01:24390316..24394896
RNA-Seq ExpressionPI0013846
SyntenyPI0013846
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR002343 - Paraneoplastic encephalomyelitis antigen
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057544.1 RNA-binding protein BRN1 [Cucumis melo var. makuwa]1.2e-24194.74Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG-----------------CCFVICPSRQEADKAVNAC
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG                 CCFVICPSRQEADKAVNAC
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG-----------------CCFVICPSRQEADKAVNAC

Query:  HNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP
        HNKKTLPGASSPLQVKYADGELERL EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP
Subjt:  HNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP

Query:  LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM
        LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM
Subjt:  LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM

Query:  AARNYAMPPASYSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSA
        A RNYAMPPASYSAYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD +LANSFRAFGRVLSA
Subjt:  AARNYAMPPASYSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSA

Query:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        KVFVDKTSGVSKCFGFVSYDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

TYK18266.1 RNA-binding protein BRN1 [Cucumis melo var. makuwa]3.5e-24191.72Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR---------------------------------GCCF
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR                                 GCCF
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR---------------------------------GCCF

Query:  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL
        VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL
Subjt:  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL

Query:  EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ
        EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ
Subjt:  EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ

Query:  GNAMRGIPPDLGPGMAARNYAMPPASYSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDL
        GNAMRGIPPDLGPGMA RNYAMPPASYSAYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD 
Subjt:  GNAMRGIPPDLGPGMAARNYAMPPASYSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDL

Query:  DLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        +LANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  DLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

XP_004148884.1 RNA-binding protein BRN1 [Cucumis sativus]5.6e-24798.86Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGV
        KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMA RNYAMPPASYSAYPGV
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGV

Query:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
        P LQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD +LANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
Subjt:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

XP_008451423.1 PREDICTED: RNA-binding protein BRN1 [Cucumis melo]2.8e-24698.63Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGV
        KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMA RNYAMPPASYSAYPGV
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGV

Query:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
        P LQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD +LANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
Subjt:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        YDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

XP_038900154.1 RNA-binding protein BRN1 [Benincasa hispida]3.2e-23495.92Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSR GERKE SNQEEEDSVKLFVGQVPK MTE QLL MFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASY--SAYP
        KAQSQA+NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSG+PNMIPQLNQGNAMRGIPPDLGPGMA RNY MPPA+Y  SAYP
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASY--SAYP

Query:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGK-NSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFG
        GVPGLQHPMAY GGMMSPGVVSSSPGPGPFTGGK NSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGD +LANSFRAFGRVLSAKVFVDKTSGVSKCFG
Subjt:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGK-NSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  FVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        FVSYDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  FVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

TrEMBL top hitse value%identityAlignment
A0A0A0K5R5 Uncharacterized protein2.7e-24798.86Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGV
        KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMA RNYAMPPASYSAYPGV
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGV

Query:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
        P LQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD +LANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
Subjt:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

A0A1S3BRF9 RNA-binding protein BRN11.3e-24698.63Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGV
        KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMA RNYAMPPASYSAYPGV
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGV

Query:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
        P LQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD +LANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
Subjt:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        YDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

A0A5A7UR22 RNA-binding protein BRN15.8e-24294.74Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG-----------------CCFVICPSRQEADKAVNAC
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG                 CCFVICPSRQEADKAVNAC
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG-----------------CCFVICPSRQEADKAVNAC

Query:  HNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP
        HNKKTLPGASSPLQVKYADGELERL EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP
Subjt:  HNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP

Query:  LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM
        LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM
Subjt:  LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM

Query:  AARNYAMPPASYSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSA
        A RNYAMPPASYSAYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD +LANSFRAFGRVLSA
Subjt:  AARNYAMPPASYSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSA

Query:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        KVFVDKTSGVSKCFGFVSYDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

A0A5D3D400 RNA-binding protein BRN11.7e-24191.72Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR---------------------------------GCCF
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR                                 GCCF
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR---------------------------------GCCF

Query:  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL
        VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL
Subjt:  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL

Query:  EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ
        EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ
Subjt:  EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ

Query:  GNAMRGIPPDLGPGMAARNYAMPPASYSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDL
        GNAMRGIPPDLGPGMA RNYAMPPASYSAYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD 
Subjt:  GNAMRGIPPDLGPGMAARNYAMPPASYSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDL

Query:  DLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        +LANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  DLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

A0A6J1GP82 RNA-binding protein BRN1-like2.5e-22994.1Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGS GGERK SS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASY--SAYP
        KAQSQA+NVLNADSQ  SLFGA+PLGY+PPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMA RNY MPPASY  SAYP
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASY--SAYP

Query:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGG-KNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFG
         VPGLQHPMAYPGGMMSPGVVSSS  PGPFTGG  NSPTSSLGKGSG QIEGPPGANLFIYHIPQEFGDL+LANSFRAFGRVLSAKVFVDKTSGVSKCFG
Subjt:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGG-KNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  FVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        FVSYDS EAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  FVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

SwissProt top hitse value%identityAlignment
A0JM51 CUGBP Elav-like family member 52.0e-6936.62Show/hide
Query:  KESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEH
        ++S + ++ D++KLFVGQ+P+++ E  L  +F++F  + E+ +++D+ T   +GC F+   +R  A KA  A H +KTLPG + P+QVK AD E    + 
Subjt:  KESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEH

Query:  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK------------
        KLF+GML K  SE+EV+ +F  +G+I++  +LRG   +SKGCAF+K+ +  +A AA++A++G   M G+S  LVVK+ADT+KER  R+            
Subjt:  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK------------

Query:  -------------AQKAQSQATNVLNADS---QHPSL-FGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPG
                     AQ    Q T VL+        PS+ F +  +  +   N  G  A         H PP+   +  P ++  L  G       P   P 
Subjt:  -------------AQKAQSQATNVLNADS---QHPSL-FGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPG

Query:  MAA--RNYAMP-PAS------YSAYPGVPGLQHPMA-YPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLAN
        +     N  +P PA        S +P   G+Q   A YP   ++P V  S+P P P                  Q EGP G NLFIYH+PQEFGD +L  
Subjt:  MAA--RNYAMP-PAS------YSAYPGVPGLQHPMA-YPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLAN

Query:  SFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
         F  FG ++S+KVF+D+ +  SKCFGFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR    ++PY
Subjt:  SFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

Q6P0B1 CUGBP Elav-like family member 25.7e-6937.06Show/hide
Query:  ESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL-
        E S+Q + D++K+FVGQ+P+  +E +L  +F+ +  V ++NI+RD++     S+GCCFV   +R+ A +A NA HN KTL G   P+Q+K AD E     
Subjt:  ESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL-

Query:  -EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQAT
         + KLFIGM+ K  +E+++  +FS YG I++ +ILRG    S+GCAF+ + T+  A  A++A++    MEG S P+VVK+ADT+K+++ R+ Q+  +Q  
Subjt:  -EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQAT

Query:  NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQY---------HLPPMQN------------QSGFPNMIPQLNQGNAMRGIPPDLGPGMAARN
          LN+ S   SL G    G  P Y     QA  S  L  +         +   +QN             S  P+    L       G         A  +
Subjt:  NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQY---------HLPPMQN------------QSGFPNMIPQLNQGNAMRGIPPDLGPGMAARN

Query:  YAMPP-ASYSAYPGVPG--------------LQHPMAYPGGMMSPGVVSSSPGP-----GPFTGGKNSPTSSL-----------GKGSGGQIEGPPGANL
         AM    S     G+ G              +    A  GG+ S G+ + S GP       ++G +    ++L              +G Q EGP GANL
Subjt:  YAMPP-ASYSAYPGVPG--------------LQHPMAYPGGMMSPGVVSSSPGP-----GPFTGGKNSPTSSL-----------GKGSGGQIEGPPGANL

Query:  FIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
        FIYH+PQEFGD D+   F  FG V+SAKVF+DK + +SKCFGFVSYD+  +AQ+AI  MNG Q+G K+LKVQLKR    SKPY
Subjt:  FIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

Q8GZ26 RNA-binding protein BRN22.2e-14563.7Show/hide
Query:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM
        E E+ VKLFVGQVPKHMTE QLLT+F+EF++V+EVNII++KTTRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQH
        LPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K QS   +V   D Q+
Subjt:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQH

Query:  PSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMAARNYAMPPASYSAYPGVPGLQHPMAY
        PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y    G  GLQ+PMA+
Subjt:  PSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMAARNYAMPPASYSAYPGVPGLQHPMAY

Query:  PGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQS
        P GM+ P +  ++  PG    G + P+S        Q EGP GANLFIY+IP+EF D +LA +F+ FG+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+
Subjt:  PGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQS

Query:  AISTMNGCQLGGKKLKVQLKRDNKQSK
        AI+TMNGCQL GKKLKVQLKRDN Q +
Subjt:  AISTMNGCQLGGKKLKVQLKRDNKQSK

Q8LFS6 RNA-binding protein BRN12.0e-15968.65Show/hide
Query:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE
        E KE + +  EEE+SVKLFVGQ+PKHM+E QLLT+FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELE
Subjt:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE

Query:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA
        RLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKAQS  
Subjt:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA

Query:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMAARNYAMPPASY--SAYPGV
          + N D  +PSLFGA+P+GYVPPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y  S YP +
Subjt:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMAARNYAMPPASY--SAYPGV

Query:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
         G   P AYP G++SP  +SSS  PG  + G ++P   +G  S  Q EGP GANLFIY+IP+EFGD +LA +F++FG VLSAKVFVDK +GVSKCFGFVS
Subjt:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKP
        YDS  AAQ+AI  MNG  LGGKKLKVQLKRD+   +P
Subjt:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKP

Q9IBD0 CUGBP Elav-like family member 17.5e-6935.94Show/hide
Query:  NQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EH
        +Q + DS+K+FVGQ+P+  +E QL  +F+ +  V E+N++RD++     S+GCCFV   +R+ A +A NA HN K LPG   P+Q+K AD E      + 
Subjt:  NQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EH

Query:  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVL
        KLF+GM+ K  +E+++  +FS YG I++ +ILRG    S+GCAF+ +  +  A +A+++++    MEG S P+VVK+ADT+K+++ ++  +   Q    L
Subjt:  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVL

Query:  NADSQHPSLFGAMPLG--YVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGVPGLQ----
        NA S   +L G   LG  Y+  Y     Q   S G    +L PM   +   N+       +A +  P     G +A   +  P S     G P  Q    
Subjt:  NADSQHPSLFGAMPLG--YVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGVPGLQ----

Query:  -------------------HPMAYPGGMMSPGV-------VSSSPGPGPFTGGKNSPTSSLGKGS-----------------------------------
                           +PMA  G + S          +SS        GG  S   S G GS                                   
Subjt:  -------------------HPMAYPGGMMSPGV-------VSSSPGPGPFTGGKNSPTSSLGKGS-----------------------------------

Query:  ---GGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY
           G Q EGP GANLFIYH+PQEFGD DL   F  FG V+SAKVF+DK + +SKCFGFVSYD+  ++Q+AI +MNG Q+G K+LKVQLKR    SKPY
Subjt:  ---GGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-14663.7Show/hide
Query:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM
        E E+ VKLFVGQVPKHMTE QLLT+F+EF++V+EVNII++KTTRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQH
        LPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K QS   +V   D Q+
Subjt:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQH

Query:  PSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMAARNYAMPPASYSAYPGVPGLQHPMAY
        PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y    G  GLQ+PMA+
Subjt:  PSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMAARNYAMPPASYSAYPGVPGLQHPMAY

Query:  PGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQS
        P GM+ P +  ++  PG    G + P+S        Q EGP GANLFIY+IP+EF D +LA +F+ FG+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+
Subjt:  PGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQS

Query:  AISTMNGCQLGGKKLKVQLKRDNKQSK
        AI+TMNGCQL GKKLKVQLKRDN Q +
Subjt:  AISTMNGCQLGGKKLKVQLKRDNKQSK

AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.3e-14462.39Show/hide
Query:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--------
        E E+ VKLFVGQVPKHMTE QLLT+F+EF++V+EVNII++KTTRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERL        
Subjt:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--------

Query:  -EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQAT
         EHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K QS   
Subjt:  -EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQAT

Query:  NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMAARNYAMPPASYSAYPGV
        +V   D Q+PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y    G 
Subjt:  NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMAARNYAMPPASYSAYPGV

Query:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
         GLQ+PMA+P GM+ P +  ++  PG    G + P+S        Q EGP GANLFIY+IP+EF D +LA +F+ FG+VLSAKVFVDK +G+SKCFGF+S
Subjt:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSK
        YDS  AAQ+AI+TMNGCQL GKKLKVQLKRDN Q +
Subjt:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSK

AT4G03110.1 RNA-binding protein-defense related 11.5e-16068.65Show/hide
Query:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE
        E KE + +  EEE+SVKLFVGQ+PKHM+E QLLT+FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELE
Subjt:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE

Query:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA
        RLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKAQS  
Subjt:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA

Query:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMAARNYAMPPASY--SAYPGV
          + N D  +PSLFGA+P+GYVPPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y  S YP +
Subjt:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMAARNYAMPPASY--SAYPGV

Query:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
         G   P AYP G++SP  +SSS  PG  + G ++P   +G  S  Q EGP GANLFIY+IP+EFGD +LA +F++FG VLSAKVFVDK +GVSKCFGFVS
Subjt:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKP
        YDS  AAQ+AI  MNG  LGGKKLKVQLKRD+   +P
Subjt:  YDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKP

AT4G03110.2 RNA-binding protein-defense related 11.8e-14768.08Show/hide
Query:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE
        E KE + +  EEE+SVKLFVGQ+PKHM+E QLLT+FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELE
Subjt:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE

Query:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA
        RLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKAQS  
Subjt:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA

Query:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMAARNYAMPPASY--SAYPGVP
          + N D  +PSLFGA+P+GYVPPYNGYGY  PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y  S YP + 
Subjt:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMAARNYAMPPASY--SAYPGVP

Query:  GLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSY
        G   P AYP G++SP  +SSS  PG  + G ++P   +G  S  Q EGP GANLFIY+IP+EFGD +LA +F++FG VLSAKVFVDK +GVSKCFG +S+
Subjt:  GLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSY

Query:  D
        D
Subjt:  D

AT4G16280.2 RNA binding;abscisic acid binding4.1e-3834.43Show/hide
Query:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLF
        +   +VKLFVG VP+  TE ++   F++   V EV +I+DK T   +GCCFV   + ++AD+A+ A HN+ TLPG + P+QV+YADGE ER   LE KLF
Subjt:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLF

Query:  IGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNAD
        +G L K  +E EV  +F Q+G ++D+ ++R   + S+GC F+KY +K+ A+AA++ +NG   M G + PL+V++A+ ++ +     + A           
Subjt:  IGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNAD

Query:  SQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLG--PGMAA--RNYAMPPASYSAYPGVPGLQHP
                 + LG  P +   G +   ++G       H  P +  +   N+ P  N G  +RG   D    PG A    N   P   Y    GVP L +P
Subjt:  SQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLG--PGMAA--RNYAMPPASYSAYPGVPGLQHP

Query:  MAYPG
        +  PG
Subjt:  MAYPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGGGAGTAGAGGAGGAGAGAGAAAGGAGAGTAGTAATCAGGAGGAAGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTTCCAAAGCATATGACCGAACCTCA
ACTTCTCACAATGTTCCAAGAGTTTGCACTTGTGGATGAAGTCAACATCATCAGAGACAAAACCACTCGCGCCTCTAGAGGTTGTTGTTTTGTGATTTGTCCTTCGAGGC
AAGAGGCGGATAAGGCGGTCAATGCTTGCCATAACAAGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTTAAATATGCAGATGGCGAGCTGGAAAGACTAGAACAC
AAACTCTTTATTGGAATGCTTCCGAAAAATGTATCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAGTATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCACAGCA
GACAAGTAAAGGTTGCGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGG
TTGTTAAATGGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCACTAATGTGCTTAATGCAGACTCCCAACACCCTTCACTGTTT
GGAGCCATGCCATTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGG
TTTTCCCAACATGATACCTCAATTAAACCAAGGTAATGCAATGCGTGGGATCCCGCCTGACCTTGGCCCAGGTATGGCCGCTAGAAATTATGCCATGCCTCCTGCAAGTT
ACTCTGCCTATCCTGGAGTTCCAGGTCTTCAGCATCCAATGGCGTACCCTGGAGGAATGATGAGTCCAGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTTACTGGT
GGCAAGAACTCTCCGACGTCTAGTTTGGGTAAAGGGTCTGGAGGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCCCAAGAATTTGGAGATCT
GGATCTTGCCAACTCTTTTAGAGCATTTGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTATGATTCCG
CCGAGGCTGCTCAATCTGCCATAAGTACGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGA
mRNA sequenceShow/hide mRNA sequence
GAAGACTCTCCGAAGAAAAATCCAATCTCAGAGAGAGAAGTTGACGGCGAAATCTAGAGAGAGAAAGCTTGAAACCGGCATTAATGGCGGAAGGGAGTAGAGGAGGAGAG
AGAAAGGAGAGTAGTAATCAGGAGGAAGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTTCCAAAGCATATGACCGAACCTCAACTTCTCACAATGTTCCAAGAGTTTGC
ACTTGTGGATGAAGTCAACATCATCAGAGACAAAACCACTCGCGCCTCTAGAGGTTGTTGTTTTGTGATTTGTCCTTCGAGGCAAGAGGCGGATAAGGCGGTCAATGCTT
GCCATAACAAGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTTAAATATGCAGATGGCGAGCTGGAAAGACTAGAACACAAACTCTTTATTGGAATGCTTCCGAAA
AATGTATCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAGTATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAGTAAAGGTTGCGCATTCTTGAA
GTATGAGACGAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCCGACACAGAGAAGG
AAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCACTAATGTGCTTAATGCAGACTCCCAACACCCTTCACTGTTTGGAGCCATGCCATTGGGTTATGTTCCA
CCATATAACGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAACATGATACCTCAATTAAA
CCAAGGTAATGCAATGCGTGGGATCCCGCCTGACCTTGGCCCAGGTATGGCCGCTAGAAATTATGCCATGCCTCCTGCAAGTTACTCTGCCTATCCTGGAGTTCCAGGTC
TTCAGCATCCAATGGCGTACCCTGGAGGAATGATGAGTCCAGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTTACTGGTGGCAAGAACTCTCCGACGTCTAGTTTG
GGTAAAGGGTCTGGAGGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCCCAAGAATTTGGAGATCTGGATCTTGCCAACTCTTTTAGAGCATT
TGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTATGATTCCGCCGAGGCTGCTCAATCTGCCATAAGTA
CGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGATTCGGTGTAACGTTATCGAAGGCAGCAAAT
TTGCTACCACTTGCTGACACTGGGGGTCCTAATGACAATCATTCCATTATCAGATATCCTAGGGTGGATTAGGGACGTTCTATGGTTAAAATTCATTACTCCATCCTGCC
TGTGATTGCATCAGATCAAATCAAAGATACTTGTAATTCATGGTTCGGCCATGCTGATGCAATTTGTAATTTATGTATTTTGGAAGATTAACATTCTTTAATTGATTCTT
CCGGGACATCTGTTGATTGTAAAATACCATGTAATTATAAATGATCTCTTGATTCTTTTA
Protein sequenceShow/hide protein sequence
MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEH
KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLF
GAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMAARNYAMPPASYSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTG
GKNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLDLANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGCQLGGKKLKVQLKRDNKQSKPY