; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013859 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013859
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr06:12757756..12758984
RNA-Seq ExpressionPI0013859
SyntenyPI0013859
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]1.9e-5148.56Show/hide
Query:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNR------RGGRS
        M+F+Q+DRENL D W RFKRM+K CPH+ IPEC+LME FYFGL+K T Q+A+ VF   ML+SSYNQIK  LDTMASN++EW ++ FG+R      +G R 
Subjt:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNR------RGGRS

Query:  RGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQIDDMGCVGCDGHHNTDACPLNTETVAFVRNDPFSNTYNPGTIPTFDGEDRVNNNK
        R ++G+D S++V LQGQ+  M N+L+SMA+ QVN    SV    Q+++MGCVGC   HNT+ACPLNTE VA+++NDP      P  I  + GE    +++
Subjt:  RGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQIDDMGCVGCDGHHNTDACPLNTETVAFVRNDPFSNTYNPGTIPTFDGEDRVNNNK

Query:  GDMVVKVTIAGKHLAPTRVRAAHQRFLRKTARIPPNNTETPNQ
           +  + +    L           F R+  R  P+NTETPNQ
Subjt:  GDMVVKVTIAGKHLAPTRVRAAHQRFLRKTARIPPNNTETPNQ

KAA0061983.1 uncharacterized protein E6C27_scaffold89G002850 [Cucumis melo var. makuwa]3.1e-4645.66Show/hide
Query:  EAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDM
        +AKRW N+++ GEV TW+ LIEKFMKKFFP  + AKRR++L+ F+Q+DR+NLHDAWS FKRMVKAC H+GI + +LME FYFGL+K T+Q+AD++F+  +
Subjt:  EAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDM

Query:  LKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQIDDMGCVGCDGHHNTDACPL
        L+SSYNQIKA LD+MA+N+++                                                    S HA   +++M C GC G HNTDACPL
Subjt:  LKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQIDDMGCVGCDGHHNTDACPL

Query:  NTETVAFVRNDPFSNTYNP
        N E VA+V+ DP      P
Subjt:  NTETVAFVRNDPFSNTYNP

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]3.8e-4464.54Show/hide
Query:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGM
        M F+Q+D+EN+HD WSRFKR+VKACP +GIPEC+ MEVFYFGL+K T Q  + +FV  ML+SSYNQIKATLD+M++N++EWD+  FG+R  GR++  EG+
Subjt:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGM

Query:  DKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQID
        DKSVVVVLQGQM AMNNLL+SM +SQVNAA   +HA  Q++
Subjt:  DKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQID

XP_038896560.1 uncharacterized protein LOC120084813 [Benincasa hispida]4.0e-4637.09Show/hide
Query:  GISPRELRFALFLLTLRYEAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYF
        G++P ELR  LF  TLR EA+RW  +L+  E+  WDQL+E+FM +FF    N +RR ++++F+QK  E L  AW RF+++VK+CPH GIP+CI+ME FY 
Subjt:  GISPRELRFALFLLTLRYEAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYF

Query:  GLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGMDKSVVVV-----LQGQMTAMNNLLKSMAISQVNAAGGSVHA
        GL++ TQ   DA     ++  SY ++K+ LD ++ +++EW + +F      RS   E ++ ++V V     L  Q+T M +LL++MA  Q + + GS  A
Subjt:  GLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGMDKSVVVV-----LQGQMTAMNNLLKSMAISQVNAAGGSVHA

Query:  --ANQIDDMGCVGCDGHHNTDACPLNTETVAFVRNDPFSNTYNPG--TIPTFDGEDRVNNNKGDMVVKVTIAGKHLAPTRVRAAHQRFLRKTARIPP---
             +  M C+ C   H+ +    N ++V  + N+PF NTYNPG    PTF   DR N+N+G                  ++ HQ   +     PP   
Subjt:  --ANQIDDMGCVGCDGHHNTDACPLNTETVAFVRNDPFSNTYNPG--TIPTFDGEDRVNNNKGDMVVKVTIAGKHLAPTRVRAAHQRFLRKTARIPP---

Query:  ------NNT--ETPNQAGG-GGSGKEKCHAVTLRSGR
              N T    P+ +G  G  GKE+C AVTLRSG+
Subjt:  ------NNT--ETPNQAGG-GGSGKEKCHAVTLRSGR

XP_038904327.1 uncharacterized protein LOC120090680 [Benincasa hispida]2.2e-4438.87Show/hide
Query:  MPGISPRELRFALFLLTLRYEAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVF
        +PGI+P  +R +LF  +LR +AK+WV++L+ GE+ TW++L+EKFM+K+FP   NA+RR+E+M+F+Q++ E L  AW RFK +V   P+NG+P  I ME+F
Subjt:  MPGISPRELRFALFLLTLRYEAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVF

Query:  YFGLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNR--RGGRSRGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAA
        Y GLN+A Q  ADA     ++  SY + K  L  +A +  EW +D +  R  R  RS+    +D + +  L  Q+  M +LL+++ +   +    ++   
Subjt:  YFGLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNR--RGGRSRGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAA

Query:  NQIDDMG-----CVGCDGHHNTDACPLNTETVAFVRNDPFSNTYNPG
        NQ++  G     CVGC   H+   CP N +++  ++N+PF NTYN G
Subjt:  NQIDDMG-----CVGCDGHHNTDACPLNTETVAFVRNDPFSNTYNPG

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein1.8e-4464.54Show/hide
Query:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGM
        M F+Q+D+EN+HD WSRFKR+VKACP +GIPEC+ MEVFYFGL+K T Q  + +FV  ML+SSYNQIKATLD+M++N++EWD+  FG+R  GR++  EG+
Subjt:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGM

Query:  DKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQID
        DKSVVVVLQGQM AMNNLL+SM +SQVNAA   +HA  Q++
Subjt:  DKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQID

A0A5A7V1F3 Retrotrans_gag domain-containing protein1.5e-4645.66Show/hide
Query:  EAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDM
        +AKRW N+++ GEV TW+ LIEKFMKKFFP  + AKRR++L+ F+Q+DR+NLHDAWS FKRMVKAC H+GI + +LME FYFGL+K T+Q+AD++F+  +
Subjt:  EAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDM

Query:  LKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQIDDMGCVGCDGHHNTDACPL
        L+SSYNQIKA LD+MA+N+++                                                    S HA   +++M C GC G HNTDACPL
Subjt:  LKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQIDDMGCVGCDGHHNTDACPL

Query:  NTETVAFVRNDPFSNTYNP
        N E VA+V+ DP      P
Subjt:  NTETVAFVRNDPFSNTYNP

A0A5D3CC26 Uncharacterized protein9.1e-5248.56Show/hide
Query:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNR------RGGRS
        M+F+Q+DRENL D W RFKRM+K CPH+ IPEC+LME FYFGL+K T Q+A+ VF   ML+SSYNQIK  LDTMASN++EW ++ FG+R      +G R 
Subjt:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNR------RGGRS

Query:  RGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQIDDMGCVGCDGHHNTDACPLNTETVAFVRNDPFSNTYNPGTIPTFDGEDRVNNNK
        R ++G+D S++V LQGQ+  M N+L+SMA+ QVN    SV    Q+++MGCVGC   HNT+ACPLNTE VA+++NDP      P  I  + GE    +++
Subjt:  RGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQIDDMGCVGCDGHHNTDACPLNTETVAFVRNDPFSNTYNPGTIPTFDGEDRVNNNK

Query:  GDMVVKVTIAGKHLAPTRVRAAHQRFLRKTARIPPNNTETPNQ
           +  + +    L           F R+  R  P+NTETPNQ
Subjt:  GDMVVKVTIAGKHLAPTRVRAAHQRFLRKTARIPPNNTETPNQ

A0A6J1EEI2 uncharacterized protein LOC1114333943.6e-4038.52Show/hide
Query:  LRFALFLLTLRYEAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKAT
        +R +LF  +LR  AK W+N L  G + +W+ L+EKF+ K+FPP  NA+ R E++ FQQ + + L +AW RFK M++ CPH+G+P CI ME FY GLN AT
Subjt:  LRFALFLLTLRYEAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKAT

Query:  QQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAA---NQIDDMG
        +Q  DA     +L  +YN+    L+ +ASNN +W   D  +  G ++RG   ++   +  +  Q+ ++ N+L+++A+ Q +     VH     NQ     
Subjt:  QQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAA---NQIDDMG

Query:  CVGCDGHHNTDACPLNTETVAFV---------RNDPFSNTYNPG
        CV C   H  D CP N  ++ +V         +N+PFSNTYNPG
Subjt:  CVGCDGHHNTDACPLNTETVAFV---------RNDPFSNTYNPG

U5CUI2 Retrotrans_gag domain-containing protein6.5e-4242.13Show/hide
Query:  GISPRELRFALFLLTLRYEAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYF
        G+S   LR  LF  +LR  A+ W+N L    V  W+ L EKF++K+FPP  NAK R E+MSFQQ + E+  DAW RFK +++ CPH+GIP CI ME FY 
Subjt:  GISPRELRFALFLLTLRYEAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYF

Query:  GLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEG-MDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQI
        GLN A++   DA     +L  SYN+    L+T+ASNN +W      N R   SR   G ++   +  L  QM +M N+LK+++I   NA      AA Q 
Subjt:  GLNKATQQTADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEG-MDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQI

Query:  DDMGCVGCDGHHNTDACPLNTETVAFVRNDPFSNT
        DD+ CV C   H  + CP N E+V ++ N   + T
Subjt:  DDMGCVGCDGHHNTDACPLNTETVAFVRNDPFSNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGGCATCTCACCTAGAGAATTGAGATTCGCTCTCTTCCTGTTAACTCTGAGGTATGAGGCGAAGAGGTGGGTCAACGCCTTGAAAGATGGCGAGGTGGGAACATG
GGATCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACCTCACGAAAATGCCAAAAGAAGGAAGGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATG
ACGCGTGGAGTAGGTTTAAGAGGATGGTGAAAGCATGCCCCCACAATGGCATTCCTGAATGCATATTGATGGAGGTTTTCTATTTTGGGCTAAACAAGGCTACACAGCAG
ACTGCTGATGCTGTGTTTGTAAGCGATATGCTAAAGAGCTCCTACAACCAGATTAAGGCGACGTTGGACACGATGGCCAGCAACAATGAAGAATGGGATGAAGATGATTT
CGGCAATCGCCGAGGAGGACGATCAAGAGGTGATGAAGGCATGGATAAGAGCGTCGTGGTGGTGTTGCAGGGACAAATGACTGCGATGAACAATCTACTCAAATCAATGG
CAATATCGCAAGTCAACGCCGCAGGAGGCTCTGTGCACGCGGCTAACCAAATTGATGACATGGGATGTGTGGGATGTGACGGTCATCATAACACTGACGCATGCCCACTC
AATACTGAAACTGTCGCGTTCGTAAGGAACGACCCCTTCTCCAATACTTATAACCCTGGAACCATCCCAACTTTTGATGGGGAGGATCGAGTCAACAACAACAAGGGCGA
CATGGTGGTCAAGGTGACCATCGCGGGGAAGCATCTGGCTCCCACGCGAGTTAGGGCAGCTCACCAGCGATTTCTCCGGAAGACCGCAAGGATCCCTCCTAACAATACAG
AAACGCCAAATCAGGCCGGGGGGGGGGGATCTGGTAAAGAGAAGTGTCACGCGGTGACACTACGCAGCGGAAGAAATTTAACCATCCGCGACCCTGATGCTGAACGTAGC
CGCTCCAATTCTAACTTACTGCCGAGATCGGTAGTTCAAGTAAAATTCCTACTCTTGTACATTTTCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGGCATCTCACCTAGAGAATTGAGATTCGCTCTCTTCCTGTTAACTCTGAGGTATGAGGCGAAGAGGTGGGTCAACGCCTTGAAAGATGGCGAGGTGGGAACATG
GGATCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACCTCACGAAAATGCCAAAAGAAGGAAGGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATG
ACGCGTGGAGTAGGTTTAAGAGGATGGTGAAAGCATGCCCCCACAATGGCATTCCTGAATGCATATTGATGGAGGTTTTCTATTTTGGGCTAAACAAGGCTACACAGCAG
ACTGCTGATGCTGTGTTTGTAAGCGATATGCTAAAGAGCTCCTACAACCAGATTAAGGCGACGTTGGACACGATGGCCAGCAACAATGAAGAATGGGATGAAGATGATTT
CGGCAATCGCCGAGGAGGACGATCAAGAGGTGATGAAGGCATGGATAAGAGCGTCGTGGTGGTGTTGCAGGGACAAATGACTGCGATGAACAATCTACTCAAATCAATGG
CAATATCGCAAGTCAACGCCGCAGGAGGCTCTGTGCACGCGGCTAACCAAATTGATGACATGGGATGTGTGGGATGTGACGGTCATCATAACACTGACGCATGCCCACTC
AATACTGAAACTGTCGCGTTCGTAAGGAACGACCCCTTCTCCAATACTTATAACCCTGGAACCATCCCAACTTTTGATGGGGAGGATCGAGTCAACAACAACAAGGGCGA
CATGGTGGTCAAGGTGACCATCGCGGGGAAGCATCTGGCTCCCACGCGAGTTAGGGCAGCTCACCAGCGATTTCTCCGGAAGACCGCAAGGATCCCTCCTAACAATACAG
AAACGCCAAATCAGGCCGGGGGGGGGGGATCTGGTAAAGAGAAGTGTCACGCGGTGACACTACGCAGCGGAAGAAATTTAACCATCCGCGACCCTGATGCTGAACGTAGC
CGCTCCAATTCTAACTTACTGCCGAGATCGGTAGTTCAAGTAAAATTCCTACTCTTGTACATTTTCCTTTAA
Protein sequenceShow/hide protein sequence
MPGISPRELRFALFLLTLRYEAKRWVNALKDGEVGTWDQLIEKFMKKFFPPHENAKRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPECILMEVFYFGLNKATQQ
TADAVFVSDMLKSSYNQIKATLDTMASNNEEWDEDDFGNRRGGRSRGDEGMDKSVVVVLQGQMTAMNNLLKSMAISQVNAAGGSVHAANQIDDMGCVGCDGHHNTDACPL
NTETVAFVRNDPFSNTYNPGTIPTFDGEDRVNNNKGDMVVKVTIAGKHLAPTRVRAAHQRFLRKTARIPPNNTETPNQAGGGGSGKEKCHAVTLRSGRNLTIRDPDAERS
RSNSNLLPRSVVQVKFLLLYIFL