; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013887 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013887
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionselenoprotein F-like
Genome locationchr11:868766..872348
RNA-Seq ExpressionPI0013887
SyntenyPI0013887
Gene Ontology termsGO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR014912 - Selenoprotein F/M domain
IPR036249 - Thioredoxin-like superfamily
IPR038219 - Selenoprotein F/M, thioredoxin-like domain superfamily
IPR039992 - Selenoprotein F/M


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039920.1 15 kDa selenoprotein [Cucumis melo var. makuwa]2.3e-8791.76Show/hide
Query:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVTDCLKCCAEDSDDATSKIT
        MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ           ELV DCLKCCAEDSDDATSKIT
Subjt:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVTDCLKCCAEDSDDATSKIT

Query:  YSGAVLEVCMRKLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        YSGAVLEVCMRKLVFYPEIVGFIE+DKDQFPSVKVQY FNSPPKLILLDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  YSGAVLEVCMRKLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_004140597.1 selenoprotein F [Cucumis sativus]1.7e-8795.32Show/hide
Query:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWN A AVTVAL ATAIIFISSMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEDDKDQFPSVKVQY FNSPPKLILLDD+GQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_008460012.1 PREDICTED: 15 kDa selenoprotein [Cucumis melo]7.1e-8996.49Show/hide
Query:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWNPATAVTV LAA AIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV DCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIE+DKDQFPSVKVQY FNSPPKLILLDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

XP_022954272.1 selenoprotein F-like [Cucurbita moschata]1.6e-8090.7Show/hide
Query:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLL GV NPAT VT+   ATAIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCC EDSDDATSKITYSGA+LEVCMR
Subjt:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVK-RSSAI
        KLVFYPEIVGFIE++KDQFPSV VQY FNSPPKLILLDDEGQHKESIRIDNWKREHILQFL+EKVK RSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVK-RSSAI

XP_038875398.1 selenoprotein F [Benincasa hispida]2.3e-8794.74Show/hide
Query:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGV NPATAVT+A+AAT +IFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCC EDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIE++KDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

TrEMBL top hitse value%identityAlignment
A0A0A0KA30 Sep15_SelM domain-containing protein8.5e-8895.32Show/hide
Query:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWN A AVTVAL ATAIIFISSMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIEDDKDQFPSVKVQY FNSPPKLILLDD+GQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A1S3CC00 15 kDa selenoprotein3.4e-8996.49Show/hide
Query:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWNPATAVTV LAA AIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV DCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        KLVFYPEIVGFIE+DKDQFPSVKVQY FNSPPKLILLDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A5A7T9G4 15 kDa selenoprotein1.1e-8791.76Show/hide
Query:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVTDCLKCCAEDSDDATSKIT
        MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ           ELV DCLKCCAEDSDDATSKIT
Subjt:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVTDCLKCCAEDSDDATSKIT

Query:  YSGAVLEVCMRKLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI
        YSGAVLEVCMRKLVFYPEIVGFIE+DKDQFPSVKVQY FNSPPKLILLDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  YSGAVLEVCMRKLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI

A0A6J1GQK6 selenoprotein F-like7.7e-8190.7Show/hide
Query:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLL GV NPAT VT+   ATAIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCC EDSDDATSKITYSGA+LEVCMR
Subjt:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVK-RSSAI
        KLVFYPEIVGFIE++KDQFPSV VQY FNSPPKLILLDDEGQHKESIRIDNWKREHILQFL+EKVK RSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVK-RSSAI

A0A6J1JXH9 selenoprotein F-like8.5e-8090.12Show/hide
Query:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLL GV NPAT VT+   ATAIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCC EDSDDATSKITYSGA+LEVCMR
Subjt:  MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVK-RSSAI
        KLVFYPEIVGFIE++K QFPSV VQY FNSPPKLILLDDEGQHKESIRIDNWKREHILQFL+EKVK RSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVK-RSSAI

SwissProt top hitse value%identityAlignment
A1Z623 Selenoprotein F2.5e-2036.36Show/hide
Query:  PGVW-NPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLV
        PG W  PA  + + L ATA+  +S+        + SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA+LEVC  KL 
Subjt:  PGVW-NPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLV

Query:  FYPEIVGFIEDDKDQ-FPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKR
         +P++  F+  DK + F  ++++Y+  S P L LLDD G   E + I  W  + + +FL EK++R
Subjt:  FYPEIVGFIEDDKDQ-FPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKR

A8YXY3 Selenoprotein F7.3e-2037.88Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  DK + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR

O60613 Selenoprotein F1.2e-1937.88Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  DK + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Q802F3 Selenoprotein F2.1e-1937.88Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYIFNSPPKLI
        +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA+LEVC  KL  +P++  F+  DK + F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Q923V8 Selenoprotein F4.0e-1835.37Show/hide
Query:  GVW-NPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVF
        G W  PA  + + L ATA   +S++       + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA+LEVC  KL  
Subjt:  GVW-NPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVF

Query:  YPEIVGFIEDDKDQ-FPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKR
        +P++  F+  DK + F  ++++Y+  S P L LLDD G   E + I  W  + + +FL EK++R
Subjt:  YPEIVGFIEDDKDQ-FPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKR

Arabidopsis top hitse value%identityAlignment
AT1G05720.1 selenoprotein family protein2.4e-6672.78Show/hide
Query:  AVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFI
        A  V L+A  I+ ++S   A  KEQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELV+DCLKCCA+DS+D+ SK+TYSGA+LEVCMRKLVFYPEIVGFI
Subjt:  AVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFI

Query:  EDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSA
        E++K++FPSVKVQYIFNSPPKLI+LD++G+HKESIRIDNWKREH+LQ+++EKVK ++A
Subjt:  EDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTTCTCCCCGGAGTATGGAATCCCGCTACAGCGGTGACGGTAGCGTTAGCTGCGACGGCGATCATTTTCATCTCGTCAATGCCGTTGGCTTGGTCAAAGGAGCA
ACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCTCTCTGTTCCGATTGTCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGACGGACTGCT
TGAAGTGTTGTGCAGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCCGTGCTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGC
TTCATCGAAGACGATAAGGATCAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATGAGGGCCAGCATAAAGAAAGCAT
CAGGATTGATAATTGGAAACGAGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATTTCTTCAAATTTGAAGTTAAAAATTCGTCTTTTGTAGCGAGAGTTTTCCGATCGTCCGTAGACTTCGCTTTTTCACCCTCAGTCGCCGGCGACCACAGAGATGCAGCT
TCTCCCCGGAGTATGGAATCCCGCTACAGCGGTGACGGTAGCGTTAGCTGCGACGGCGATCATTTTCATCTCGTCAATGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCT
CGAGGGAATGTGAGGATCTAGGTTTCACAGGCCTTGCTCTCTGTTCCGATTGTCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGACGGACTGCTTGAAGTGT
TGTGCAGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCCGTGCTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATCGA
AGACGATAAGGATCAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATGAGGGCCAGCATAAAGAAAGCATCAGGATTG
ATAATTGGAAACGAGAACATATTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAAGGTTCTTTCACTTTTTTTTTTTTTTTTTTTTTTTACTTTTAA
ATTACATCTCTTAATCCATGTAAAAAACTTGTTGAATTTGAATCAAACTATTATCAGCCAGAAAAAGAAAAAAGAAAACGAAAAAAACTTGAGGTGAGTGAACACTGGAT
TTTGTGAATTTCAAGGTTAGTAGTGGAAATATAATTGATTTCCTTTTGTCTAAATCTTTTACTCTTAACATTTAACTGGGGGAAGAAGCTCCTCTCATGGGTGAAATCAA
TACATTTTGGAGCTATTTTGGATCTAATCGAATGAGTTTGTGATATAATGTAATCCTAAATCTATGTTTGGGCTGACTGTTTTGGAACCAATTTATAATACCAAATTTAT
TTTGTTCTCACAGTTTTCAATCCAATTTTTTTTTACCGTTTTCATGCTTCATAATTTCAGTCCACGATTTCTCACGCATTTTAACACCTCTTAAATTTTTAATAACGCTG
ATTACAGTTATG
Protein sequenceShow/hide protein sequence
MQLLPGVWNPATAVTVALAATAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVTDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVG
FIEDDKDQFPSVKVQYIFNSPPKLILLDDEGQHKESIRIDNWKREHILQFLQEKVKRSSAI