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PI0013898 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013898
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag protease polyprotein
Genome locationchr08:1443536..1444144
RNA-Seq ExpressionPI0013898
SyntenyPI0013898
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.9e-5667.17Show/hide
Query:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST
        MAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQK+GY IPNSR GIGY+ SEPVRIT K KAKVA+TCHITVEE  DS+E +K  SQR+S FDRI  S 
Subjt:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST

Query:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV
         R SVFQR++    +D N+ S   STRLSAFQRLNT          TP TR SAFKRLSVSVTRDQKK  ++VS+K  LVT DE IRSA PSRMK+++
Subjt:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV

KAA0050182.1 gag protease polyprotein [Cucumis melo var. makuwa]5.5e-5666.16Show/hide
Query:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST
        MAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQK+GY IPNS+ GIGY+ SEPVRIT K K KVA+TCHITVEE  DSKE +K+ SQR+S FDRI    
Subjt:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST

Query:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV
         R SVFQR++    +D N+ S   STRLSAFQRLNT          TP TR SAFKRLSVSVTR QKK  I+VS+K  LVT+DE IRSA PSRMK+++
Subjt:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.9e-5667.17Show/hide
Query:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST
        MAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQK+GY IPNSR GIGY+ SEPVRIT K KAKVA+TCHITVEE  DS+E +K  SQR+S FDRI  S 
Subjt:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST

Query:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV
         R SVFQR++    +D N+ S   STRLSAFQRLNT          TP TR SAFKRLSVSVTRDQKK  ++VS+K  LVT DE IRSA PSRMK+++
Subjt:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV

TYK06199.1 uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa]3.2e-5666.67Show/hide
Query:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST
        MAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQK+GY IPNSR GIGY  SEPVRIT K K KVA+TCHITVEE  DS+E +K+ SQR+S FDRI  S 
Subjt:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST

Query:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV
         R SVFQR++    +D N+ S   STRLSAFQRLNT          TP TR SAFKRLSVSVTRDQKK  ++VS+K  LVT DE IRSA PSRMK+++
Subjt:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]1.9e-5667.17Show/hide
Query:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST
        MAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQK+GY IPNSR GIGY+ SEPVRIT K KAKVA+TCHITVEE  DS+E +K  SQR+S FDRI  S 
Subjt:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST

Query:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV
         R SVFQR++    +D N+ S   STRLSAFQRLNT          TP TR SAFKRLSVSVTRDQKK  ++VS+K  LVT DE IRSA PSRMK+++
Subjt:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H9.1e-5767.17Show/hide
Query:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST
        MAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQK+GY IPNSR GIGY+ SEPVRIT K KAKVA+TCHITVEE  DS+E +K  SQR+S FDRI  S 
Subjt:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST

Query:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV
         R SVFQR++    +D N+ S   STRLSAFQRLNT          TP TR SAFKRLSVSVTRDQKK  ++VS+K  LVT DE IRSA PSRMK+++
Subjt:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV

A0A5A7U2W9 Gag protease polyprotein2.7e-5666.16Show/hide
Query:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST
        MAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQK+GY IPNS+ GIGY+ SEPVRIT K K KVA+TCHITVEE  DSKE +K+ SQR+S FDRI    
Subjt:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST

Query:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV
         R SVFQR++    +D N+ S   STRLSAFQRLNT          TP TR SAFKRLSVSVTR QKK  I+VS+K  LVT+DE IRSA PSRMK+++
Subjt:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV

A0A5D3BIH8 Uncharacterized protein9.1e-5767.17Show/hide
Query:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST
        MAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQK+GY IPNSR GIGY+ SEPVRIT K KAKVA+TCHITVEE  DS+E +K  SQR+S FDRI  S 
Subjt:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST

Query:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV
         R SVFQR++    +D N+ S   STRLSAFQRLNT          TP TR SAFKRLSVSVTRDQKK  ++VS+K  LVT DE IRSA PSRMK+++
Subjt:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV

A0A5D3C783 Ribonuclease H1.6e-5666.67Show/hide
Query:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST
        MAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQK+GY IPNSR GIGY  SEPVRIT K K KVA+TCHITVEE  DS+E +K+ SQR+S FDRI  S 
Subjt:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST

Query:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV
         R SVFQR++    +D N+ S   STRLSAFQRLNT          TP TR SAFKRLSVSVTRDQKK  ++VS+K  LVT DE IRSA PSRMK+++
Subjt:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV

A0A5D3D1E5 Ribonuclease H9.1e-5767.17Show/hide
Query:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST
        MAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQK+GY IPNSR GIGY+ SEPVRIT K KAKVA+TCHITVEE  DS+E +K  SQR+S FDRI  S 
Subjt:  MAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSST

Query:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV
         R SVFQR++    +D N+ S   STRLSAFQRLNT          TP TR SAFKRLSVSVTRDQKK  ++VS+K  LVT DE IRSA PSRMK+++
Subjt:  ARSSVFQRLNVPTREDKNEGSAFESTRLSAFQRLNT----------TPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTACACAAAGGAAGCTTCAAAAGAAAGGATA
TTTTATACCAAATTCAAGACCAGGAATTGGGTATAAGTTTTCCGAGCCGGTTCGAATAACTAGTAAAGAAAAAGCAAAAGTTGCTGACACATGCCACATTACTGTTGAAG
AATGCAACGACTCTAAAGAAGACGAAAAAAACGAAAGTCAAAGAAATTCTTTTTTTGATCGCATCACCTCCTCTACTGCACGCTCTTCAGTTTTCCAGAGGTTGAATGTA
CCGACAAGGGAGGACAAAAATGAAGGGTCAGCTTTTGAGTCCACCCGACTTTCTGCCTTTCAGAGACTAAATACAACTCCGGTTACGCGAACCTCTGCCTTCAAAAGGTT
AAGTGTGTCAGTGACAAGAGACCAGAAGAAACCTCTCATAGCTGTTTCAAGCAAGCCTGACTTAGTGACGAAGGACGAAAGAATTCGCAGCGCTGTTCCATCAAGAATGA
AAAAGGAAGTTGTTTGTCTCGGTAAACACAGAAGGTTTATTAAAAGTAAAACGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTACACAAAGGAAGCTTCAAAAGAAAGGATA
TTTTATACCAAATTCAAGACCAGGAATTGGGTATAAGTTTTCCGAGCCGGTTCGAATAACTAGTAAAGAAAAAGCAAAAGTTGCTGACACATGCCACATTACTGTTGAAG
AATGCAACGACTCTAAAGAAGACGAAAAAAACGAAAGTCAAAGAAATTCTTTTTTTGATCGCATCACCTCCTCTACTGCACGCTCTTCAGTTTTCCAGAGGTTGAATGTA
CCGACAAGGGAGGACAAAAATGAAGGGTCAGCTTTTGAGTCCACCCGACTTTCTGCCTTTCAGAGACTAAATACAACTCCGGTTACGCGAACCTCTGCCTTCAAAAGGTT
AAGTGTGTCAGTGACAAGAGACCAGAAGAAACCTCTCATAGCTGTTTCAAGCAAGCCTGACTTAGTGACGAAGGACGAAAGAATTCGCAGCGCTGTTCCATCAAGAATGA
AAAAGGAAGTTGTTTGTCTCGGTAAACACAGAAGGTTTATTAAAAGTAAAACGACATGA
Protein sequenceShow/hide protein sequence
MAKAGYDFTTRTEFKSKIFDERHGLSPTQRKLQKKGYFIPNSRPGIGYKFSEPVRITSKEKAKVADTCHITVEECNDSKEDEKNESQRNSFFDRITSSTARSSVFQRLNV
PTREDKNEGSAFESTRLSAFQRLNTTPVTRTSAFKRLSVSVTRDQKKPLIAVSSKPDLVTKDERIRSAVPSRMKKEVVCLGKHRRFIKSKTT