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PI0013918 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013918
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNase H domain-containing protein
Genome locationchr02:3479369..3480001
RNA-Seq ExpressionPI0013918
SyntenyPI0013918
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66404.1 hypothetical protein Csa_007382 [Cucumis sativus]1.2e-1051.49Show/hide
Query:  WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKIKSVSSCAL
        WK+NT A WS    VGGLGWVI DSI +L                       +GL+SLLS F ASI  LLIESDLSE I+ LS ID+D  +IK VS CAL
Subjt:  WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKIKSVSSCAL

Query:  K
        K
Subjt:  K

XP_015381032.1 uncharacterized protein LOC107174551 [Citrus sinensis]9.9e-0835.04Show/hide
Query:  WKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI
        W PP   W KVN DA    E  + GLG V+RDS G+      K  R+   + + E  A E GL        A+I   + ESD  E I  ++   S  T+I
Subjt:  WKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI

Query:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA
          + S   + +   Q+     CPR CN+ A SLA+LA
Subjt:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA

XP_021769751.1 uncharacterized protein LOC110734003 [Chenopodium quinoa]2.2e-0737.78Show/hide
Query:  WKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI
        W  P  DW K+NT+A  ++E  V G+G V RD++G +V    KRW+  W++ V E KA  + L  L S FG     ++IESD  E  + LS   S  T +
Subjt:  WKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI

Query:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLAR
         +V   ALKL    + V +    R  + VA  LAR
Subjt:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLAR

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]8.9e-0929.94Show/hide
Query:  TLSVGVEQLCRLINHVVHEANLSCDWLDAFLPKSLLSHGLWKPPLVD-WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFE
        + S  ++QL + +    +++  S     + L K+L +   W+PP +  W +N DA WSD    GG+GW+IR   G +V    +       +K+LE  A  
Subjt:  TLSVGVEQLCRLINHVVHEANLSCDWLDAFLPKSLLSHGLWKPPLVD-WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFE

Query:  VGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKIKSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA
         GL +L ++    + PL IE+D +E  + L+    D TK   V    L L    + ++F    R  N  A SLA+ A
Subjt:  VGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKIKSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA

XP_024041966.1 uncharacterized protein LOC112099096 [Citrus clementina]9.9e-0835.04Show/hide
Query:  WKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI
        W PP   W KVN DA    E  + GLG V+RDS G+      K  R+   + + E  A E GL        A+I   + ESD  E I  ++   S  T+I
Subjt:  WKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI

Query:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA
          + S   + +   Q+     CPR CN+ A SLA+LA
Subjt:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA

TrEMBL top hitse value%identityAlignment
A0A0A0LZE3 Uncharacterized protein6.0e-1151.49Show/hide
Query:  WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKIKSVSSCAL
        WK+NT A WS    VGGLGWVI DSI +L                       +GL+SLLS F ASI  LLIESDLSE I+ LS ID+D  +IK VS CAL
Subjt:  WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKIKSVSSCAL

Query:  K
        K
Subjt:  K

A0A1J3C7A8 Putative ribonuclease H protein (Fragment)1.5e-0628.15Show/hide
Query:  WKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI
        WKPP   W K N D  WS+E D  G+GWV+RDS G ++ +  ++ +        E++A    ++   S+  ++I   + E+D  ET+ ++S +D+ +   
Subjt:  WKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI

Query:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLAR
        K+++     ++ +L+    +  PR  N VA  +A+
Subjt:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLAR

A0A6J1CP26 uncharacterized protein LOC1110134124.0e-0732.12Show/hide
Query:  WKPPLVD-WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI
        WKPP  + WK+NT+A W  + + GG+GW++RD  G ++  + +  R    I  LE+ A   GL ++         P+ +ESD  E I  L     D T+I
Subjt:  WKPPLVD-WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI

Query:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA
          +     +++  ++ VS     R  N VA  LAR A
Subjt:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA

A0A6J1DNV9 uncharacterized protein LOC1110224034.3e-0929.94Show/hide
Query:  TLSVGVEQLCRLINHVVHEANLSCDWLDAFLPKSLLSHGLWKPPLVD-WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFE
        + S  ++QL + +    +++  S     + L K+L +   W+PP +  W +N DA WSD    GG+GW+IR   G +V    +       +K+LE  A  
Subjt:  TLSVGVEQLCRLINHVVHEANLSCDWLDAFLPKSLLSHGLWKPPLVD-WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFE

Query:  VGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKIKSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA
         GL +L ++    + PL IE+D +E  + L+    D TK   V    L L    + ++F    R  N  A SLA+ A
Subjt:  VGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKIKSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA

A0A6J1DSV1 uncharacterized protein LOC1110236085.3e-0732.39Show/hide
Query:  WKPPLVD-WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLS-----IFGASIPPLLIESDLSETIASLSDIDS
        WKPP  + WK+NTDA W  + + GG+GW++RD  G ++    +  R    I  LE+ A   GL ++       I      P+ +ESD  E I  L     
Subjt:  WKPPLVD-WKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLS-----IFGASIPPLLIESDLSETIASLSDIDS

Query:  DFTKIKSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA
        D T+I  +     +++  ++ VS     R  N VA  LAR A
Subjt:  DFTKIKSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-0625.93Show/hide
Query:  WKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI
        WK P   W K NTDA W  E    G+GW++R+  G ++ +  +    T  +   E++A      ++L++   +   ++ ESD ++ + +L + D  +  +
Subjt:  WKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKI

Query:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLAR
        +       +L+   ++V F   PR  N VA  +AR
Subjt:  KSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLAR

AT4G29090.1 Ribonuclease H-like superfamily protein4.7e-0827.89Show/hide
Query:  SHGLWKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSD
        S G W+PP   W K NTDA W+ + +  G+GWV+R+  G    V +   R   K+K +     E    ++LS+       ++ ESD S+ +  + + D  
Subjt:  SHGLWKPPLVDW-KVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLNSLLSIFGASIPPLLIESDLSETIASLSDIDSD

Query:  FTKIKSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLAWCWILY
        +  +K       +L+ +  +V F+  PR  N +A  +AR +  ++ Y
Subjt:  FTKIKSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLAWCWILY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGAAGTTTGTCCCTACTCTTTCGGTTGGTGTTGAGCAATTGTGTAGGTTGATCAATCATGTGGTGCACGAGGCAAACCTCTCTTGTGATTGGTTGGATGCCTT
TTTACCGAAGAGCCTGTTGAGTCATGGGTTGTGGAAACCGCCCCTTGTGGATTGGAAGGTGAATACAGATGCTCCTTGGAGTGATGAGTTCGATGTAGGTGGTTTGGGTT
GGGTGATTCGTGACTCGATCGGATCTTTGGTTGGTGTGACTTTCAAAAGATGGCGAATGACGTGGAAGATCAAGGTTCTCGAGATGAAAGCATTTGAGGTGGGTCTGAAT
TCTTTGTTGTCTATATTTGGTGCCTCAATCCCCCCTTTGCTTATTGAGTCAGACTTGAGCGAGACGATTGCTTCTTTGTCAGATATTGACAGTGACTTTACTAAGATTAA
AAGTGTGTCTTCTTGTGCTCTGAAGTTGGTGGGGCGCCTCCAGGATGTTTCTTTTTTGTCCTGTCCTAGAAGTTGTAATTGGGTAGCGCGCTCATTGGCTAGATTGGCTT
GGTGTTGGATTTTGTATTCTTTTTTTAGTTCTGAGGAGTTTTCCTCTTCCTTGGAAGATGATGTTTTTCTGTTTCTAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGAAGTTTGTCCCTACTCTTTCGGTTGGTGTTGAGCAATTGTGTAGGTTGATCAATCATGTGGTGCACGAGGCAAACCTCTCTTGTGATTGGTTGGATGCCTT
TTTACCGAAGAGCCTGTTGAGTCATGGGTTGTGGAAACCGCCCCTTGTGGATTGGAAGGTGAATACAGATGCTCCTTGGAGTGATGAGTTCGATGTAGGTGGTTTGGGTT
GGGTGATTCGTGACTCGATCGGATCTTTGGTTGGTGTGACTTTCAAAAGATGGCGAATGACGTGGAAGATCAAGGTTCTCGAGATGAAAGCATTTGAGGTGGGTCTGAAT
TCTTTGTTGTCTATATTTGGTGCCTCAATCCCCCCTTTGCTTATTGAGTCAGACTTGAGCGAGACGATTGCTTCTTTGTCAGATATTGACAGTGACTTTACTAAGATTAA
AAGTGTGTCTTCTTGTGCTCTGAAGTTGGTGGGGCGCCTCCAGGATGTTTCTTTTTTGTCCTGTCCTAGAAGTTGTAATTGGGTAGCGCGCTCATTGGCTAGATTGGCTT
GGTGTTGGATTTTGTATTCTTTTTTTAGTTCTGAGGAGTTTTCCTCTTCCTTGGAAGATGATGTTTTTCTGTTTCTAGGATGA
Protein sequenceShow/hide protein sequence
MAKKFVPTLSVGVEQLCRLINHVVHEANLSCDWLDAFLPKSLLSHGLWKPPLVDWKVNTDAPWSDEFDVGGLGWVIRDSIGSLVGVTFKRWRMTWKIKVLEMKAFEVGLN
SLLSIFGASIPPLLIESDLSETIASLSDIDSDFTKIKSVSSCALKLVGRLQDVSFLSCPRSCNWVARSLARLAWCWILYSFFSSEEFSSSLEDDVFLFLG