; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013930 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013930
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr06:14628593..14629900
RNA-Seq ExpressionPI0013930
SyntenyPI0013930
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032916.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]9.9e-9545.52Show/hide
Query:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV
        MS + YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V   K F PRP I  YF    
Subjt:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV

Query:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS
         + D  IEP++   ++ E  S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P++W QG+F  + FS PF P S
Subjt:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+ +I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLL-STVVNASSSSKSASSFIQEDEELASPE
         +K L K+L+IKWWEK+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  ++ + VVN S  +      + ED  LAS  
Subjt:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLL-STVVNASSSSKSASSFIQEDEELASPE

Query:  ------------YDLNDPFLDSQP
                     D+NDPFLD+QP
Subjt:  ------------YDLNDPFLDSQP

KAA0032923.1 polyprotein [Cucumis melo var. makuwa]2.6e-9545.48Show/hide
Query:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV
        MS + YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V   K F PRP I  YF K  
Subjt:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV

Query:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS
         I D  IEP++   ++ E  S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P++W QG+F  + FS PF P S
Subjt:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+ +I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE
         +K L K+L IKWWEK+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++ VV      N      ++ + + + ++
Subjt:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]2.2e-9445.71Show/hide
Query:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV
        MS + YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V   K F PRP I  YF K  
Subjt:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV

Query:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS
         + D  IEP++   ++ E  S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P++W QG+F  + FS PF P S
Subjt:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+ +I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLL-STVVNASSSSK------SASSFIQEDE
         +K L K+L+IKWWEK+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  ++ + VVN S  +       S +S    D+
Subjt:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLL-STVVNASSSSK------SASSFIQEDE

Query:  ELASP--EYDLNDPFLDSQP
            P    D+NDPFLD+QP
Subjt:  ELASP--EYDLNDPFLDSQP

KAA0068172.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.4e-9545.24Show/hide
Query:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV
        MS + YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V   K F PRP I  YF K  
Subjt:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV

Query:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS
         + D  IEPK+   ++ E  S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P++W QG+F  + FS PF P S
Subjt:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+ +I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE
         +K L K+L+IKWWEK+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++ VV      N       + + +   ++
Subjt:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

TYK28077.1 polyprotein [Cucumis melo var. makuwa]4.4e-9545.24Show/hide
Query:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV
        MS + YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V   K F PRP I  YF K  
Subjt:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV

Query:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS
         + D  IEP++   ++ E  S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P++W QG+F  + FS PF P S
Subjt:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+ +I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE
         +K L K+L IKWWEK+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++ VV      N      ++ + + + ++
Subjt:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein1.3e-9545.48Show/hide
Query:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV
        MS + YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V   K F PRP I  YF K  
Subjt:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV

Query:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS
         I D  IEP++   ++ E  S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P++W QG+F  + FS PF P S
Subjt:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+ +I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE
         +K L K+L IKWWEK+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++ VV      N      ++ + + + ++
Subjt:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5A7SS94 Retrotransposable element Tf24.8e-9545.52Show/hide
Query:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV
        MS + YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V   K F PRP I  YF    
Subjt:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV

Query:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS
         + D  IEP++   ++ E  S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P++W QG+F  + FS PF P S
Subjt:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+ +I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLL-STVVNASSSSKSASSFIQEDEELASPE
         +K L K+L+IKWWEK+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  ++ + VVN S  +      + ED  LAS  
Subjt:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLL-STVVNASSSSKSASSFIQEDEELASPE

Query:  ------------YDLNDPFLDSQP
                     D+NDPFLD+QP
Subjt:  ------------YDLNDPFLDSQP

A0A5A7U3G5 Polyprotein1.1e-9444.42Show/hide
Query:  STSSKGSRLSSSPNPAPSPMSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVA
        +T SKG    S+ + APS MS + YAMDL F  V+R    S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V 
Subjt:  STSSKGSRLSSSPNPAPSPMSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVA

Query:  LEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTH
          K F PRP I  YF K   + D  IEP++   ++ E  ++IFP  FNFLPEDL KT  F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P++
Subjt:  LEKWFIPRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTH

Query:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFC
        W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+ +I P  +Q SY  F ++I  +    + RF 
Subjt:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFC

Query:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV-----
        LYFQIPWIFCW+F       +K L K+L+IKWWEK+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++ VV     
Subjt:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV-----

Query:  -NASSSSKSASSFIQEDEELASPEY---DLNDPFLDSQP
         N      ++ + + + ++L    Y   D+NDPFLD+QP
Subjt:  -NASSSSKSASSFIQEDEELASPEY---DLNDPFLDSQP

A0A5A7VIK9 Retrotransposable element Tf22.1e-9545.24Show/hide
Query:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV
        MS + YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V   K F PRP I  YF K  
Subjt:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV

Query:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS
         + D  IEPK+   ++ E  S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P++W QG+F  + FS PF P S
Subjt:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+ +I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE
         +K L K+L+IKWWEK+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++ VV      N       + + +   ++
Subjt:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5D3DW87 Polyprotein2.1e-9545.24Show/hide
Query:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV
        MS + YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V   K F PRP I  YF K  
Subjt:  MSVDQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGIT---HPASP-LSNMESSTP--PTTYSQAVALEKWFIPRPEIKTYFQKQV

Query:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS
         + D  IEP++   ++ E  S+IFP GFNFLPEDL KT+ F+E+ILVD+KS EITHVP+KNDPSK+ YSKL+ F+ + P++W QG+F  + FS PF P S
Subjt:  AIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+ +I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE
         +K L K+L IKWWEK+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++ VV      N      ++ + + + ++
Subjt:  QYKMLVKNLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVV------NASSSSKSASSFIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATAGTTCGAGACAGAGGAAGAGTAAGTTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCTATGAGTGTAGATCAATATGC
AATGGATTTGGGGTTTACTACAGTAACCCGATCTAAGGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCATCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACTCATCCTGCCTCTCCTCTATCAAATATGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCTAGAAAAATGGTTCATA
CCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAAAATATCAAAGTCTCACTCTCGATGAGACAGTTTCAAAAATCTT
CCCTGAGGGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACCAAAAAATTTTTCGAGTTTATTCTAGTAGATACAAAGTCTGTAGAAATAACTCACGTACCCAACAAAA
ACGATCCTTCAAAAGTCGCTTATTCCAAACTAAAAAATTTCAAAGCAATCAATCCAACTCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTCTCAAAACCATTTGTA
CCTCAATCCTACTCTTACCAAGACTACATTAAAGCTTGGTTTAGAGTTATTTGGTTTTCTAGCAGGAACCATTCTTGGTTCATTTCCTTTTGCCAGAACGCCTACAAAAT
AAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTTACAGGCGACATCCTACCAACTCCCATTCAAGAATCCTATTTTTATTTCACAAGAACAATTCAAA
AGAATTCTTTTCATAACTCAATGAGATTTTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACGGCATCCTATCCTCAATACAAAATGCTTGTTAAA
AATCTCAAGATTAAATGGTGGGAGAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGACTATCTTCAAGACATCGATCAGAAAAA
GAACACAGAATTCTTGAATGATAAATCAAAACTACTTGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGTAGTAAATGCCTCTTCAA
GCTCAAAATCAGCATCTTCTTTCATACAGGAAGATGAAGAATTGGCAAGTCCAGAGTACGATCTAAACGACCCGTTTCTCGACTCACAACCTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATAGTTCGAGACAGAGGAAGAGTAAGTTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCTATGAGTGTAGATCAATATGC
AATGGATTTGGGGTTTACTACAGTAACCCGATCTAAGGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCATCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACTCATCCTGCCTCTCCTCTATCAAATATGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCTAGAAAAATGGTTCATA
CCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAAAATATCAAAGTCTCACTCTCGATGAGACAGTTTCAAAAATCTT
CCCTGAGGGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACCAAAAAATTTTTCGAGTTTATTCTAGTAGATACAAAGTCTGTAGAAATAACTCACGTACCCAACAAAA
ACGATCCTTCAAAAGTCGCTTATTCCAAACTAAAAAATTTCAAAGCAATCAATCCAACTCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTCTCAAAACCATTTGTA
CCTCAATCCTACTCTTACCAAGACTACATTAAAGCTTGGTTTAGAGTTATTTGGTTTTCTAGCAGGAACCATTCTTGGTTCATTTCCTTTTGCCAGAACGCCTACAAAAT
AAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTTACAGGCGACATCCTACCAACTCCCATTCAAGAATCCTATTTTTATTTCACAAGAACAATTCAAA
AGAATTCTTTTCATAACTCAATGAGATTTTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACGGCATCCTATCCTCAATACAAAATGCTTGTTAAA
AATCTCAAGATTAAATGGTGGGAGAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGACTATCTTCAAGACATCGATCAGAAAAA
GAACACAGAATTCTTGAATGATAAATCAAAACTACTTGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGTAGTAAATGCCTCTTCAA
GCTCAAAATCAGCATCTTCTTTCATACAGGAAGATGAAGAATTGGCAAGTCCAGAGTACGATCTAAACGACCCGTTTCTCGACTCACAACCTATGTGA
Protein sequenceShow/hide protein sequence
MSIVRDRGRVSSTSSKGSRLSSSPNPAPSPMSVDQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITHPASPLSNMESSTPPTTYSQAVALEKWFI
PRPEIKTYFQKQVAIYDPIIEPKYQSLTLDETVSKIFPEGFNFLPEDLRKTKKFFEFILVDTKSVEITHVPNKNDPSKVAYSKLKNFKAINPTHWNQGIFTEKSFSKPFV
PQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTGDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
NLKIKWWEKYNFQHATIKHMKEWFAENDYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTVVNASSSSKSASSFIQEDEELASPEYDLNDPFLDSQPM