CuGenDBv2

Gene ID	PI0013934
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	transcription factor bHLH146-like
Genome location	chr05:5664408..5665055
RNA-Seq Expression	PI0013934
Synteny	PI0013934
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR044660 - Transcription factor IBH1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586090.1 Transcription factor basic helix-loop-helix 146, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-54

71.12

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISH---QQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFS
        MGR+I+RK +RV S+EPNK+AYTMFARNYVK+LMTSL KISH   Q Q+QSFQKLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+    GNG+ NGF  S
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISH---QQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFS

Query:  LQTVTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        LQ V KF++ENL  E+E+H  EE+EE EE+ +ENGL KLRKI+PGG +    G L EEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  LQTVTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

XP_011648935.1 transcription factor bHLH146 [Cucumis sativus]

5.8e-84

91.4

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQT
        M RK+VRKGRRVFSIEP+KVAYTMF RNYVKHLMTSLVKISHQQQQQ+F+KLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFS+QT
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQT

Query:  VTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
        V K SQENLGNEEEDHH EE+EEEEE+ MENGL KLRKIIPGG +FSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
Subjt:  VTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF

XP_016901419.1 PREDICTED: uncharacterized protein At4g30180 [Cucumis melo]

9.2e-82

89.53

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRD--QQVLGNGNENGFDFSL
        M RKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQ+FQKLV+FEVDMAMAQSASEFSWGIALKKKLLQRD  Q+VLGNG+ENGFDFSL
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRD--QQVLGNGNENGFDFSL

Query:  QTVTKFSQENLGNEEEDHH--EEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGG-NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
        QT+ K S +NLGNEEEDHH  EEE+EEEEE+ MENGL KLRKIIPGG DFSIGG NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
Subjt:  QTVTKFSQENLGNEEEDHH--EEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGG-NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF

XP_022938205.1 transcription factor bHLH146-like [Cucurbita moschata]

1.3e-54

71.12

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISH---QQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFS
        MGR+I+RK +RV S+EPNK+AYTMFARNYVK+LMTSL KISH   Q Q+Q+FQKLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+    GNG+ NGF  S
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISH---QQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFS

Query:  LQTVTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        LQ V KFS+ENL  E+E+H  EE+EE EE+ +ENGL KLRKI+PGG +    G L EEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  LQTVTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

XP_038877916.1 transcription factor bHLH146-like [Benincasa hispida]

1.5e-63

78.24

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Query:  MGRKIVRKG-RRVFSIEPNKVAYTMFARNYVKHLMTSLVKIS------HQQQQQSFQKLVKFEVDMAMAQSAS-EFSWGIALKKKLLQRDQQVLGNGNEN
        MGR+IVRKG RRVFS+EPNKVAYTMFARNYVKHLMTSLVKIS      HQQQ+Q+FQK VKFEVDMAMAQSAS +F+WGIALKKKLLQRDQ     GNEN
Subjt:  MGRKIVRKG-RRVFSIEPNKVAYTMFARNYVKHLMTSLVKIS------HQQQQQSFQKLVKFEVDMAMAQSAS-EFSWGIALKKKLLQRDQQVLGNGNEN

Query:  GFDFSLQTVTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTF
         FDFSLQTV KFSQENLG EEE+      E EEEK ME+GL KLRKIIPGG DF+I     E+DDLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  GFDFSLQTVTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJA7 Uncharacterized protein

2.8e-84

91.4

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQT
        M RK+VRKGRRVFSIEP+KVAYTMF RNYVKHLMTSLVKISHQQQQQ+F+KLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFS+QT
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQT

Query:  VTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
        V K SQENLGNEEEDHH EE+EEEEE+ MENGL KLRKIIPGG +FSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
Subjt:  VTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF

A0A1S4DZN3 uncharacterized protein At4g30180

4.5e-82

89.53

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRD--QQVLGNGNENGFDFSL
        M RKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQ+FQKLV+FEVDMAMAQSASEFSWGIALKKKLLQRD  Q+VLGNG+ENGFDFSL
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRD--QQVLGNGNENGFDFSL

Query:  QTVTKFSQENLGNEEEDHH--EEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGG-NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
        QT+ K S +NLGNEEEDHH  EEE+EEEEE+ MENGL KLRKIIPGG DFSIGG NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF
Subjt:  QTVTKFSQENLGNEEEDHH--EEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGG-NLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFF

A0A6J1DIU0 transcription factor bHLH146

3.8e-49

65.95

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQT
        MGR+IVRK RRVFS+EPNK+ Y MFARNY K+LM SL KIS     Q+ QK+VKFEVDMAMA SASEF+WG ALK+KLLQ+ +   GNG  N FDFSLQT
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQT

Query:  VTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGG-GDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        + KFS+E          +EE+EEE++K MENGL KLRKI+PGG  +    G+L EEDDLLKQTESY+KCLELQVNVLR LV+TNT
Subjt:  VTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGG-GDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

A0A6J1FJ33 transcription factor bHLH146-like

6.1e-55

71.12

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISH---QQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFS
        MGR+I+RK +RV S+EPNK+AYTMFARNYVK+LMTSL KISH   Q Q+Q+FQKLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+    GNG+ NGF  S
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISH---QQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFS

Query:  LQTVTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        LQ V KFS+ENL  E+E+H  EE+EE EE+ +ENGL KLRKI+PGG +    G L EEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  LQTVTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

A0A6J1I0E6 transcription factor bHLH146-like

1.5e-53

70.21

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISH---QQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFS
        MGR+I+RK +RV S+EP+K+AYTMFARNYVK+LMTSL KISH   Q QQQ+FQKLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+     NG+ NGF FS
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISH---QQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFS

Query:  LQTVTKFSQENLGNEEEDHHE-EEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
        L    KFS+ENL  E+E+H E EE EE EE+ +ENGL KLRKI+PGG +    G L EEDDL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  LQTVTKFSQENLGNEEEDHHE-EEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

SwissProt top hits

e value

%identity

Alignment

Q9SUM5 Transcription factor bHLH146

1.6e-15

32.61

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQT
        M R+I+ + +RVFS+EPNK    +F R Y  HL+ +L K++    + S ++ VK EVDMA+A SA EF+W   L +KL                     T
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQT

Query:  VTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         T  S + +   E    E   EE     +E  L++L+K++PGG + ++       +++L +  +Y+KCLELQ   L+ +V+ +T
Subjt:  VTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors

2.3e-22

37.04

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKI-----SHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFD
        M R+I+ K +RVFS++PNK    +FAR YV HL+ +L KI     S +  +QS ++ VK EVDMA A SA EF+W   L++KLL          +     
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKI-----SHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFD

Query:  FSLQTVTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         S   + + S +  G E+   H++  EEEE   ++  LK+L+K++PGG + ++       +++L +  SY+ CLELQ+ VL+ +V+ NT
Subjt:  FSLQTVTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators

1.1e-16

32.61

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Query:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQT
        M R+I+ + +RVFS+EPNK    +F R Y  HL+ +L K++    + S ++ VK EVDMA+A SA EF+W   L +KL                     T
Subjt:  MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQT

Query:  VTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT
         T  S + +   E    E   EE     +E  L++L+K++PGG + ++       +++L +  +Y+KCLELQ   L+ +V+ +T
Subjt:  VTKFSQENLGNEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAAGGAAAATTGTGAGGAAAGGAAGAAGGGTATTTTCCATAGAACCAAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAACATTTGATGACATCTTT
AGTCAAAATTTCTCATCAACAACAACAACAAAGTTTTCAGAAACTAGTGAAGTTTGAAGTTGACATGGCAATGGCTCAATCAGCAAGTGAATTTAGTTGGGGAATTGCTC
TAAAAAAGAAGCTTCTTCAAAGAGATCAACAAGTACTTGGCAATGGCAATGAAAATGGTTTTGATTTTTCTCTTCAAACAGTGACGAAATTCTCTCAAGAAAATTTAGGA
AATGAAGAAGAGGATCATCATGAAGAAGAAAAAGAAGAAGAAGAGGAGAAAATAATGGAAAATGGGTTGAAGAAGCTGAGGAAAATTATACCAGGTGGTGGTGATTTTAG
TATTGGAGGTAATTTGGATGAAGAAGATGATTTATTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTCAATGTTCTTAGAGGTTTGGTTGAAACAAACA
CTTTTTTTAGTTTTTAA

mRNA sequence

Show/hide mRNA sequence

TTTCTCTTCTCCAAAACCCATCAATATAATTTTTCTTTAATTTCTTGTTATTTCTTCAAATTTTGTGTGAAGAAATGGGAAGGAAAATTGTGAGGAAAGGAAGAAGGGTA
TTTTCCATAGAACCAAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAACATTTGATGACATCTTTAGTCAAAATTTCTCATCAACAACAACAACAAAGTTT
TCAGAAACTAGTGAAGTTTGAAGTTGACATGGCAATGGCTCAATCAGCAAGTGAATTTAGTTGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGATCAACAAGTAC
TTGGCAATGGCAATGAAAATGGTTTTGATTTTTCTCTTCAAACAGTGACGAAATTCTCTCAAGAAAATTTAGGAAATGAAGAAGAGGATCATCATGAAGAAGAAAAAGAA
GAAGAAGAGGAGAAAATAATGGAAAATGGGTTGAAGAAGCTGAGGAAAATTATACCAGGTGGTGGTGATTTTAGTATTGGAGGTAATTTGGATGAAGAAGATGATTTATT
GAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTCAATGTTCTTAGAGGTTTGGTTGAAACAAACACTTTTTTTAGTTTTTAAATTTGTG

Protein sequence

Show/hide protein sequence

MGRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQSFQKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSLQTVTKFSQENLG
NEEEDHHEEEKEEEEEKIMENGLKKLRKIIPGGGDFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNTFFSF

PI0013934 (gene) of Melon (PI 482460) v1 genome