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PI0013944 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013944
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLYR motif-containing protein 4
Genome locationchr02:23470769..23471532
RNA-Seq ExpressionPI0013944
SyntenyPI0013944
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453246.1 PREDICTED: LYR motif-containing protein 4 [Cucumis melo]2.1e-3690Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN
        MAAPTRSEALSLLRSL+RT+R FCDYNIREYA+RR VDGFRHNRNLSDP SISSAYADGKAQLEV KRQS +YSLYAPKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN

XP_011660289.1 LYR motif-containing protein 4 [Cucumis sativus]3.3e-3792.22Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN
        MA+PTRSEALSLLRSL+RTARHF DYNIREYA+RRAVDGFRHNRNLSDPPSISSAYADGKAQLEV KRQS VYSLY PKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN

XP_022134602.1 LYR motif-containing protein 4-like [Momordica charantia]3.4e-3484.44Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN
        MA PTR+EALSLLRSLLRTARHFCDYN+REYA+RRAVDGFRHNRNLSDP SISSAYADG+AQLEV +RQSTVYS +APKVKSIM+ H  N
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN

XP_022932898.1 LYR motif-containing protein 4 [Cucurbita moschata]6.9e-3587.78Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN
        MA PTRSE+LSLLRSLLRTARHFCDYNIREYA+RRAVDGFRHNRNLSDP SI  AYADGKAQLEV KRQSTVYSL++PKVKSIMEAH  N
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN

XP_038879775.1 LYR motif-containing protein 4-like [Benincasa hispida]2.5e-3792.22Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN
        M APTRSEALSLLRS LRTARHFCDYNIREYA+RRAVDGFRHNRNLSDPPSISSAYADGKAQLEV KRQS VYSLYAPKVKSIME HR N
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN

TrEMBL top hitse value%identityAlignment
A0A0A0LPH2 Uncharacterized protein1.6e-3792.22Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN
        MA+PTRSEALSLLRSL+RTARHF DYNIREYA+RRAVDGFRHNRNLSDPPSISSAYADGKAQLEV KRQS VYSLY PKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN

A0A1S3BV74 LYR motif-containing protein 41.0e-3690Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN
        MAAPTRSEALSLLRSL+RT+R FCDYNIREYA+RR VDGFRHNRNLSDP SISSAYADGKAQLEV KRQS +YSLYAPKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN

A0A5A7UTC8 LYR motif-containing protein 41.0e-3690Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN
        MAAPTRSEALSLLRSL+RT+R FCDYNIREYA+RR VDGFRHNRNLSDP SISSAYADGKAQLEV KRQS +YSLYAPKVKSIMEAHRIN
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN

A0A6J1F322 LYR motif-containing protein 43.3e-3587.78Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN
        MA PTRSE+LSLLRSLLRTARHFCDYNIREYA+RRAVDGFRHNRNLSDP SI  AYADGKAQLEV KRQSTVYSL++PKVKSIMEAH  N
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN

A0A6J1IC29 LYR motif-containing protein 43.3e-3587.78Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN
        MA PTRSE+LSLLRSLLRTARHFCDYNIREYA+RRAVDGFRHNRNLSDP SI  AYADGKAQLEV KRQSTVYSL++PKVKSIMEAH  N
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN

SwissProt top hitse value%identityAlignment
B5FZA8 LYR motif-containing protein 45.5e-1144.71Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIME
        MAA +R++ L L R+LLR ++ F  YN R YA RR  D FR N+N++D   I       KA LEV++RQ T+  +YA + K I+E
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIME

B8JLQ0 LYR motif-containing protein 41.7e-0736.36Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYA
        MA+ +R++ +SL R L++ ++ F  YN R YA RR  DGFR N ++ +P ++       +  L V+KRQ ++  LY+
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYA

Q6DCS1 LYR motif-containing protein 47.5e-0840.26Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYA
        M+A +RS+ LSL + +LR ++ F  YN R YA RR  D FR  +N+ D   I +     K  L V++RQ T+  +YA
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYA

Q6Q560 Protein ISD111.7e-0737.84Show/hide
Query:  APTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLY
        APTR + LSL +  ++ A  F +YN REY   +    FR N N  DP  + + + + K  L V+KRQS +  +Y
Subjt:  APTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLY

Q8K215 LYR motif-containing protein 42.1e-1041.56Show/hide
Query:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYA
        MAA +R++ L L R+++R ++HF  YN R YA RR  D FR N+N+ DP  I +     K  LE+++RQ  +  LY+
Subjt:  MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein1.9e-1958.23Show/hide
Query:  SEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIME
        SE LSL R+LLR  R F DYNIREY++RR +DGFR N+NL+DP  ++ AYA+ K QL V +R   VY  Y PK K+IME
Subjt:  SEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCCAACAAGATCGGAGGCCCTTTCGCTTCTTCGCTCTCTGCTCCGTACAGCCCGTCACTTCTGCGATTACAACATCAGAGAGTACGCCAGACGACGTGCCGT
CGACGGCTTCCGCCATAACCGAAACCTTTCCGATCCTCCATCCATTTCCTCCGCCTACGCCGATGGCAAGGCTCAGCTTGAAGTTGTTAAAAGACAGTCCACCGTTTACT
CCCTCTATGCACCAAAGGTAAAGAGCATCATGGAGGCTCATCGCATAAACTGA
mRNA sequenceShow/hide mRNA sequence
TTTACTTCCTATTAATTTATCATCATCCTTATTTTTATTCGGAGCCAAAGAAAGAGAATCTCTTGCTTCTTTCTTCCTTCTGTTCAACGAATCCCGAAACTCTTTTTCAC
CGTACGTTTCTACCATTCTTTTCTTCTTCTTCTTCGAGGTTCTTTGACAATGGCGGCTCCAACAAGATCGGAGGCCCTTTCGCTTCTTCGCTCTCTGCTCCGTACAGCCC
GTCACTTCTGCGATTACAACATCAGAGAGTACGCCAGACGACGTGCCGTCGACGGCTTCCGCCATAACCGAAACCTTTCCGATCCTCCATCCATTTCCTCCGCCTACGCC
GATGGCAAGGCTCAGCTTGAAGTTGTTAAAAGACAGTCCACCGTTTACTCCCTCTATGCACCAAAGGTAAAGAGCATCATGGAGGCTCATCGCATAAACTGAATACGGAA
GCTCTTTTGCCCTAATTTGTTGAAATTCTAATTCTATTACTATAGATTTCGTGAGTTAGGGTTTATTTCTGCTTCACGGATCATACCTTTTCATACATTTTCTACTAAGA
ATTCAATAAATGGTTTGTTCTGTGGTTTTTGCTTGTTTGTTTGAGTAATTAATTAATCCTTGATTGTGGGATGAAATTTGAAATATTTGGTGATGATGAACATGATTAGA
CTGATCTTCTCGTTGGTTTTGATTTGTTGGATATGATCCACTTATCAGTTTTTTTTGTATCGATGAAGTCCATTGGAACAACAGATTTTAGTCTTGAAAACTTG
Protein sequenceShow/hide protein sequence
MAAPTRSEALSLLRSLLRTARHFCDYNIREYARRRAVDGFRHNRNLSDPPSISSAYADGKAQLEVVKRQSTVYSLYAPKVKSIMEAHRIN