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PI0013951 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013951
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:848880..851750
RNA-Seq ExpressionPI0013951
SyntenyPI0013951
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032805.1 Copia protein [Cucumis melo var. makuwa]2.8e-0561.4Show/hide
Query:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISE
        MSESDR E  IPENIGEQ +V++ VI D  GS+   EV ARVTE+   EDRSE IS+
Subjt:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISE

KAA0050862.1 reverse transcriptase [Cucumis melo var. makuwa]9.2e-0453.12Show/hide
Query:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISEIRLNVDI
        MSESD+SET I        SV+  VISD +GSDGG EVIA+VTE+ T EDRS+ I++    +D+
Subjt:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISEIRLNVDI

KAA0065411.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.7e-0560.71Show/hide
Query:  SESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISE
        SESDRSET  PENI    SV+ G + D+EGSDGG +VI +VTE+N  EDR E IS+
Subjt:  SESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISE

KAA0067418.1 tRNA modification GTPase MnmE [Cucumis melo var. makuwa]2.1e-0857.81Show/hide
Query:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISEIRLNVDI
        MSESD+ ET IPENIGE  +V+ GV+S++EGSDGG EVIA+VTE+N  E+  E IS+   ++D+
Subjt:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISEIRLNVDI

TrEMBL top hitse value%identityAlignment
A0A5A7SU75 Copia protein1.4e-0561.4Show/hide
Query:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISE
        MSESDR E  IPENIGEQ +V++ VI D  GS+   EV ARVTE+   EDRSE IS+
Subjt:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISE

A0A5A7VI50 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-0560.71Show/hide
Query:  SESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISE
        SESDRSET  PENI    SV+ G + D+EGSDGG +VI +VTE+N  EDR E IS+
Subjt:  SESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISE

A0A5A7VI58 tRNA modification GTPase MnmE1.0e-0857.81Show/hide
Query:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISEIRLNVDI
        MSESD+ ET IPENIGE  +V+ GV+S++EGSDGG EVIA+VTE+N  E+  E IS+   ++D+
Subjt:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISEIRLNVDI

A0A5D3CAX0 Reverse transcriptase4.4e-0453.12Show/hide
Query:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISEIRLNVDI
        MSESD+SET I        SV+  VISD +GSDGG EVIA+VTE+ T EDRS+ I++    +D+
Subjt:  MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISEIRLNVDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAAAGTGACAGGTCCGAGACAGCCATCCCTGAGAACATTGGTGAACAAGATAGTGTTGAAGTTGGGGTAATTTCAGATAAAGAGGGCAGTGATGGTGGGGCTGA
AGTCATTGCAAGAGTTACTGAGGATAACACTACAGAGGATCGTTCAGAAAAAATCAGTGAAATCAGACTCAATGTTGATATTCATGATCATGATGACGTGGACAAGGATG
TGGACAATGACATGGATGAAGATCCTCCAACCCAAACTAAAAAAGAACATACACTACAAGAAATATCAGTTACAATACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAAAGTGACAGGTCCGAGACAGCCATCCCTGAGAACATTGGTGAACAAGATAGTGTTGAAGTTGGGGTAATTTCAGATAAAGAGGGCAGTGATGGTGGGGCTGA
AGTCATTGCAAGAGTTACTGAGGATAACACTACAGAGGATCGTTCAGAAAAAATCAGTGAAATCAGACTCAATGTTGATATTCATGATCATGATGACGTGGACAAGGATG
TGGACAATGACATGGATGAAGATCCTCCAACCCAAACTAAAAAAGAACATACACTACAAGAAATATCAGTTACAATACCATAA
Protein sequenceShow/hide protein sequence
MSESDRSETAIPENIGEQDSVEVGVISDKEGSDGGAEVIARVTEDNTTEDRSEKISEIRLNVDIHDHDDVDKDVDNDMDEDPPTQTKKEHTLQEISVTIP