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PI0013954 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013954
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr03:18040903..18041310
RNA-Seq ExpressionPI0013954
SyntenyPI0013954
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]9.8e-0938.46Show/hide
Query:  RESQDATLALESQTTV-FLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHAT--------EENDDEEFFKYINETVAKLMINGLEEVFQTQTNL
        +ES++ TL L   +    L++ +DDP  K  Q    +A +TR PSPPKQ+  P    T        +++DDE +FK+INE V++ +  G E+VFQ Q NL
Subjt:  RESQDATLALESQTTV-FLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHAT--------EENDDEEFFKYINETVAKLMINGLEEVFQTQTNL

Query:  QELAVKHEKQIVALETK
        QE  ++++K +  LE K
Subjt:  QELAVKHEKQIVALETK

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]2.4e-0747.44Show/hide
Query:  GETRAPSPPKQTENPQHHATEENDDEE-FFKYINETVAKLMINGLEEVFQTQTNLQELAVKHEKQIVALETKLNNYHQ
        GET AP P KQ  N Q +A  E+D+E+ +FK+I +T  K +++G ++VFQ Q +LQE   +HEKQI  LE K++N +Q
Subjt:  GETRAPSPPKQTENPQHHATEENDDEE-FFKYINETVAKLMINGLEEVFQTQTNLQELAVKHEKQIVALETKLNNYHQ

TYK23271.1 hypothetical protein E5676_scaffold142G003250 [Cucumis melo var. makuwa]5.9e-0640.22Show/hide
Query:  KENQTTLVEAGETRAPSPPKQTENP-------QHHATEENDDEE-FFKYINETVAKLMINGLEEVFQTQTNLQELAVKHEKQIVALETKLNN
        +E +TT   A +T  PS PKQT+ P       +  A ++ DD++ FFK+I++ V K + +G ++VFQ Q+NLQE+  +H+KQ   LE K++N
Subjt:  KENQTTLVEAGETRAPSPPKQTENP-------QHHATEENDDEE-FFKYINETVAKLMINGLEEVFQTQTNLQELAVKHEKQIVALETKLNN

TYK23898.1 gag-pol [Cucumis melo var. makuwa]9.2e-0742.86Show/hide
Query:  QDATLALESQTTVFLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHATEENDDE-EFFKYINETVAKLMINGLEEVFQTQTNLQE
        ++ATL     T    +EPVDD   K  Q    + GE   PSP KQT   Q + T E+DDE ++FK+I++T  K M++ LE++FQ Q++LQE
Subjt:  QDATLALESQTTVFLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHATEENDDE-EFFKYINETVAKLMINGLEEVFQTQTNLQE

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]9.8e-0938.46Show/hide
Query:  RESQDATLALESQTTV-FLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHAT--------EENDDEEFFKYINETVAKLMINGLEEVFQTQTNL
        +ES++ TL L   +    L++ +DDP  K  Q    +A +TR PSPPKQ+  P    T        +++DDE +FK+INE V++ +  G E+VFQ Q NL
Subjt:  RESQDATLALESQTTV-FLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHAT--------EENDDEEFFKYINETVAKLMINGLEEVFQTQTNL

Query:  QELAVKHEKQIVALETK
        QE  ++++K +  LE K
Subjt:  QELAVKHEKQIVALETK

TrEMBL top hitse value%identityAlignment
A0A5A7TJU0 Uncharacterized protein4.7e-0938.46Show/hide
Query:  RESQDATLALESQTTV-FLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHAT--------EENDDEEFFKYINETVAKLMINGLEEVFQTQTNL
        +ES++ TL L   +    L++ +DDP  K  Q    +A +TR PSPPKQ+  P    T        +++DDE +FK+INE V++ +  G E+VFQ Q NL
Subjt:  RESQDATLALESQTTV-FLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHAT--------EENDDEEFFKYINETVAKLMINGLEEVFQTQTNL

Query:  QELAVKHEKQIVALETK
        QE  ++++K +  LE K
Subjt:  QELAVKHEKQIVALETK

A0A5A7U0L9 Uncharacterized protein1.2e-0747.44Show/hide
Query:  GETRAPSPPKQTENPQHHATEENDDEE-FFKYINETVAKLMINGLEEVFQTQTNLQELAVKHEKQIVALETKLNNYHQ
        GET AP P KQ  N Q +A  E+D+E+ +FK+I +T  K +++G ++VFQ Q +LQE   +HEKQI  LE K++N +Q
Subjt:  GETRAPSPPKQTENPQHHATEENDDEE-FFKYINETVAKLMINGLEEVFQTQTNLQELAVKHEKQIVALETKLNNYHQ

A0A5D3DHY1 Uncharacterized protein2.9e-0640.22Show/hide
Query:  KENQTTLVEAGETRAPSPPKQTENP-------QHHATEENDDEE-FFKYINETVAKLMINGLEEVFQTQTNLQELAVKHEKQIVALETKLNN
        +E +TT   A +T  PS PKQT+ P       +  A ++ DD++ FFK+I++ V K + +G ++VFQ Q+NLQE+  +H+KQ   LE K++N
Subjt:  KENQTTLVEAGETRAPSPPKQTENP-------QHHATEENDDEE-FFKYINETVAKLMINGLEEVFQTQTNLQELAVKHEKQIVALETKLNN

A0A5D3DK59 Gag-pol4.4e-0742.86Show/hide
Query:  QDATLALESQTTVFLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHATEENDDE-EFFKYINETVAKLMINGLEEVFQTQTNLQE
        ++ATL     T    +EPVDD   K  Q    + GE   PSP KQT   Q + T E+DDE ++FK+I++T  K M++ LE++FQ Q++LQE
Subjt:  QDATLALESQTTVFLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHATEENDDE-EFFKYINETVAKLMINGLEEVFQTQTNLQE

A0A5D3E1H0 Uncharacterized protein4.7e-0938.46Show/hide
Query:  RESQDATLALESQTTV-FLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHAT--------EENDDEEFFKYINETVAKLMINGLEEVFQTQTNL
        +ES++ TL L   +    L++ +DDP  K  Q    +A +TR PSPPKQ+  P    T        +++DDE +FK+INE V++ +  G E+VFQ Q NL
Subjt:  RESQDATLALESQTTV-FLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHAT--------EENDDEEFFKYINETVAKLMINGLEEVFQTQTNL

Query:  QELAVKHEKQIVALETK
        QE  ++++K +  LE K
Subjt:  QELAVKHEKQIVALETK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACTTGTGTGACACCGAATTTGAAGACTTCAGAGAGTCACAGGATGCGACGTTGGCACTTGAGTCGCAAACCACAGTCTTTCTCGATGAGCCGGTTGATGACCC
AACTCCCAAGGAAAATCAAACAACCCTTGTGGAAGCTGGTGAGACGCGGGCTCCTTCGCCGCCTAAGCAAACTGAAAATCCACAACACCATGCGACGGAAGAGAATGATG
ATGAGGAATTCTTCAAGTACATTAATGAGACTGTCGCCAAGCTAATGATAAATGGACTTGAAGAAGTCTTCCAAACCCAAACCAATCTGCAAGAACTTGCAGTGAAACAT
GAGAAGCAGATTGTGGCCTTGGAAACAAAATTGAACAACTACCATCAATCGCAGAAAGACCAGCCGCATCTGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACTTGTGTGACACCGAATTTGAAGACTTCAGAGAGTCACAGGATGCGACGTTGGCACTTGAGTCGCAAACCACAGTCTTTCTCGATGAGCCGGTTGATGACCC
AACTCCCAAGGAAAATCAAACAACCCTTGTGGAAGCTGGTGAGACGCGGGCTCCTTCGCCGCCTAAGCAAACTGAAAATCCACAACACCATGCGACGGAAGAGAATGATG
ATGAGGAATTCTTCAAGTACATTAATGAGACTGTCGCCAAGCTAATGATAAATGGACTTGAAGAAGTCTTCCAAACCCAAACCAATCTGCAAGAACTTGCAGTGAAACAT
GAGAAGCAGATTGTGGCCTTGGAAACAAAATTGAACAACTACCATCAATCGCAGAAAGACCAGCCGCATCTGAAGTAG
Protein sequenceShow/hide protein sequence
MQDLCDTEFEDFRESQDATLALESQTTVFLDEPVDDPTPKENQTTLVEAGETRAPSPPKQTENPQHHATEENDDEEFFKYINETVAKLMINGLEEVFQTQTNLQELAVKH
EKQIVALETKLNNYHQSQKDQPHLK