; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0013960 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0013960
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:25368080..25368592
RNA-Seq ExpressionPI0013960
SyntenyPI0013960
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-5376.47Show/hide
Query:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP
        +LYITR +A VGHLRSNN RLRDVA+DPQ+VL+ICNNN+RYME+IH MYD+ IVP P+HRG +RV+EA+LDEVYHNVEEVP  TQTQSQTGY SPM MMP
Subjt:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP

Query:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM
         FGAGY DSEV TGYYD+G+ PSS YMDVGPS+ YM
Subjt:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.1e-4975Show/hide
Query:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP
        +LYITR  A VG  RSNN RLRDVA+D Q+ LDICNNNERYME+IH MYD+PIVP P+HRG +RV+EA+LD+VYHNVEEVPS TQTQSQTGY SPM MMP
Subjt:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP

Query:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM
         F AGYCD EV  GYYD+GV PSSSY+DV PS+SYM
Subjt:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM

KAA0064245.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.1e-4780.33Show/hide
Query:  RSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMPAFGAGYCDSEVDTG
        RSNN RLRDVA+DPQ+VLDICNNNERYME+IH MYD+PIVP PIHRG IRV+EA+LDEVYHNVEEVP  T+TQSQTGY S M MMP FGA YCDSEV  G
Subjt:  RSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMPAFGAGYCDSEVDTG

Query:  YYDSGVVPSSSYMDVGPSSSYM
        YYD+GV  SSSYMDVGPS+SYM
Subjt:  YYDSGVVPSSSYMDVGPSSSYM

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.0e-5376.47Show/hide
Query:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP
        +LYITR  A VGHLRSNN RLRDVA+DPQ+VL+ICNNN+RYME+IH MYD+ IVP P+HRG +RV+EA+LDEVYHNVEEVP  TQTQSQTGY SPM MMP
Subjt:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP

Query:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM
         FGAGY DSEV TGYYD+G+ PSS YMDVGPS+ YM
Subjt:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.3e-5478.68Show/hide
Query:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP
        +LYITR  A+VGHLRSNN RLRDV NDPQ+VLDICNNNERYMEKIH +YD+PIVP P+HR   RV+EA+LDEVYHNVEEVP  TQTQSQTGY SPM MMP
Subjt:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP

Query:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM
         FGAGYCDSEV  GYYD+ V P SSYMDVGPS+SYM
Subjt:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.7e-5476.47Show/hide
Query:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP
        +LYITR +A VGHLRSNN RLRDVA+DPQ+VL+ICNNN+RYME+IH MYD+ IVP P+HRG +RV+EA+LDEVYHNVEEVP  TQTQSQTGY SPM MMP
Subjt:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP

Query:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM
         FGAGY DSEV TGYYD+G+ PSS YMDVGPS+ YM
Subjt:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.0e-4975Show/hide
Query:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP
        +LYITR  A VG  RSNN RLRDVA+D Q+ LDICNNNERYME+IH MYD+PIVP P+HRG +RV+EA+LD+VYHNVEEVPS TQTQSQTGY SPM MMP
Subjt:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP

Query:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM
         F AGYCD EV  GYYD+GV PSSSY+DV PS+SYM
Subjt:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM

A0A5A7VEC1 GATA zinc finger domain-containing protein 10-like isoform X25.5e-4880.33Show/hide
Query:  RSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMPAFGAGYCDSEVDTG
        RSNN RLRDVA+DPQ+VLDICNNNERYME+IH MYD+PIVP PIHRG IRV+EA+LDEVYHNVEEVP  T+TQSQTGY S M MMP FGA YCDSEV  G
Subjt:  RSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMPAFGAGYCDSEVDTG

Query:  YYDSGVVPSSSYMDVGPSSSYM
        YYD+GV  SSSYMDVGPS+SYM
Subjt:  YYDSGVVPSSSYMDVGPSSSYM

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.0e-5376.47Show/hide
Query:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP
        +LYITR  A VGHLRSNN RLRDVA+DPQ+VL+ICNNN+RYME+IH MYD+ IVP P+HRG +RV+EA+LDEVYHNVEEVP  TQTQSQTGY SPM MMP
Subjt:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP

Query:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM
         FGAGY DSEV TGYYD+G+ PSS YMDVGPS+ YM
Subjt:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein6.1e-5578.68Show/hide
Query:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP
        +LYITR  A+VGHLRSNN RLRDV NDPQ+VLDICNNNERYMEKIH +YD+PIVP P+HR   RV+EA+LDEVYHNVEEVP  TQTQSQTGY SPM MMP
Subjt:  KLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMP

Query:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM
         FGAGYCDSEV  GYYD+ V P SSYMDVGPS+SYM
Subjt:  AFGAGYCDSEVDTGYYDSGVVPSSSYMDVGPSSSYM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTCTACATCACTCGATCAAAAGCAGTTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAAATGATCCACAAGAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGAAGATACATTATATGTACGATGTACCTATTGTACCTACACCAATTCATAGGGGACATATTCGAGTGAAAGAAGCTAAACTCGATGAAG
TTTACCATAATGTTGAAGAAGTACCTTCAGTGACACAAACACAGAGCCAAACTGGTTATGATAGTCCAATGATGATGATGCCAGCATTTGGAGCAGGATATTGTGATTCT
GAGGTCGATACAGGATATTATGACTCAGGGGTCGTTCCATCGTCTTCATATATGGATGTCGGTCCATCATCTTCATACATGGATGTCAGTCCATCAACTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTCTACATCACTCGATCAAAAGCAGTTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAAATGATCCACAAGAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGAAGATACATTATATGTACGATGTACCTATTGTACCTACACCAATTCATAGGGGACATATTCGAGTGAAAGAAGCTAAACTCGATGAAG
TTTACCATAATGTTGAAGAAGTACCTTCAGTGACACAAACACAGAGCCAAACTGGTTATGATAGTCCAATGATGATGATGCCAGCATTTGGAGCAGGATATTGTGATTCT
GAGGTCGATACAGGATATTATGACTCAGGGGTCGTTCCATCGTCTTCATATATGGATGTCGGTCCATCATCTTCATACATGGATGTCAGTCCATCAACTTCTTAG
Protein sequenceShow/hide protein sequence
MKLYITRSKAVVGHLRSNNRRLRDVANDPQEVLDICNNNERYMEKIHYMYDVPIVPTPIHRGHIRVKEAKLDEVYHNVEEVPSVTQTQSQTGYDSPMMMMPAFGAGYCDS
EVDTGYYDSGVVPSSSYMDVGPSSSYMDVSPSTS