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PI0014005 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014005
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr04:21236830..21237480
RNA-Seq ExpressionPI0014005
SyntenyPI0014005
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035461.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.2e-2340.33Show/hide
Query:  KQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQ
        K D   RC E EGFGH Q +C  +LKRKKKSL  T   +E  + SD EE GMAL+  I+E+   + EN  +Q  D ++ VS        L+   +  K +
Subjt:  KQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQ

Query:  EDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKG
        ED  ++  Q++ IQCL+ +N   LS+I TLK EL+  +  FE L+KS++ML  GT  L  ++   K   D++G+GF+ +KG
Subjt:  EDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKG

KAA0051793.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.7e-2744.57Show/hide
Query:  TNNTQYKQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGI--SESVVVKTENCESQKNDVKDVVSFAEPLASDLSA
        +++   K D +F+C E EGF HYQAEC+ FLKRK KSLAVTL  +ES + SD E  G  L+  +  +ES V KTE   + K+         +  +S L  
Subjt:  TNNTQYKQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGI--SESVVVKTENCESQKNDVKDVVSFAEPLASDLSA

Query:  DYVYAKGQEDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGF
        D + +K +ED  V K QK+RIQ LL DNH L+S I  LK +L+ VQ +F+SLSKSVR+L   T  L+++L   K K ++K +G+
Subjt:  DYVYAKGQEDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGF

KAA0056406.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.9e-2337.75Show/hide
Query:  KGEGEQGTNNTQYKQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLA
        +GE +  T   + K     +C E EGFGH Q+EC  +LKRKKKSL  TL  +E+ + SD EE GM L+     S  +  E  E+  + V D    A+ L 
Subjt:  KGEGEQGTNNTQYKQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLA

Query:  SDLSADYVYAKGQEDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKGKVAFVQ
          L+   +  K +ED   +  Q++RIQ L+ +N   LS+I TLK EL+  +  FE LSKS++M+  GT  L+ +L   K   D++G+GF+         +
Subjt:  SDLSADYVYAKGQEDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKGKVAFVQ

Query:  TVFV
        TVFV
Subjt:  TVFV

TYK01584.1 putative envelope-like protein [Cucumis melo var. makuwa]4.5e-2440.11Show/hide
Query:  GFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQEDIVVLKQQKDR
        GFGHYQAEC   LKRKKK+   TL  DES + SDCE  G AL+  ++E+ +           +   +     P  +    + V +  +ED  VL QQ+++
Subjt:  GFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQEDIVVLKQQKDR

Query:  IQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKGKVAFVQ-TVFVPA
        I  L  +N RL+  IS LK EL+  + ++++L+KSVRML+ GT  L+ IL  EK K D+KG+G++  KG+ +  + TVFV A
Subjt:  IQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKGKVAFVQ-TVFVPA

XP_016902771.1 PREDICTED: uncharacterized protein LOC107991877 [Cucumis melo]2.2e-2340.33Show/hide
Query:  KQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQ
        K D   RC E EGFGH Q +C  +LKRKKKSL  T   +E  + SD EE GMAL+  I+E+   + EN  +Q  D ++ VS        L+   +  K +
Subjt:  KQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQ

Query:  EDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKG
        ED  ++  Q++ IQCL+ +N   LS+I TLK EL+  +  FE L+KS++ML  GT  L  ++   K   D++G+GF+ +KG
Subjt:  EDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKG

TrEMBL top hitse value%identityAlignment
A0A1S4E3G5 uncharacterized protein LOC1079918771.1e-2340.33Show/hide
Query:  KQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQ
        K D   RC E EGFGH Q +C  +LKRKKKSL  T   +E  + SD EE GMAL+  I+E+   + EN  +Q  D ++ VS        L+   +  K +
Subjt:  KQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQ

Query:  EDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKG
        ED  ++  Q++ IQCL+ +N   LS+I TLK EL+  +  FE L+KS++ML  GT  L  ++   K   D++G+GF+ +KG
Subjt:  EDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKG

A0A5A7T1K8 Gag-pol polyprotein1.1e-2340.33Show/hide
Query:  KQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQ
        K D   RC E EGFGH Q +C  +LKRKKKSL  T   +E  + SD EE GMAL+  I+E+   + EN  +Q  D ++ VS        L+   +  K +
Subjt:  KQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQ

Query:  EDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKG
        ED  ++  Q++ IQCL+ +N   LS+I TLK EL+  +  FE L+KS++ML  GT  L  ++   K   D++G+GF+ +KG
Subjt:  EDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKG

A0A5D3BQY7 Putative envelope-like protein2.2e-2440.11Show/hide
Query:  GFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQEDIVVLKQQKDR
        GFGHYQAEC   LKRKKK+   TL  DES + SDCE  G AL+  ++E+ +           +   +     P  +    + V +  +ED  VL QQ+++
Subjt:  GFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLASDLSADYVYAKGQEDIVVLKQQKDR

Query:  IQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKGKVAFVQ-TVFVPA
        I  L  +N RL+  IS LK EL+  + ++++L+KSVRML+ GT  L+ IL  EK K D+KG+G++  KG+ +  + TVFV A
Subjt:  IQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKGKVAFVQ-TVFVPA

A0A5D3DD57 Gag-pol polyprotein2.8e-2744.57Show/hide
Query:  TNNTQYKQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGI--SESVVVKTENCESQKNDVKDVVSFAEPLASDLSA
        +++   K D +F+C E EGF HYQAEC+ FLKRK KSLAVTL  +ES + SD E  G  L+  +  +ES V KTE   + K+         +  +S L  
Subjt:  TNNTQYKQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGI--SESVVVKTENCESQKNDVKDVVSFAEPLASDLSA

Query:  DYVYAKGQEDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGF
        D + +K +ED  V K QK+RIQ LL DNH L+S I  LK +L+ VQ +F+SLSKSVR+L   T  L+++L   K K ++K +G+
Subjt:  DYVYAKGQEDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGF

A0A5D3DZR7 Gag-pol polyprotein1.4e-2337.75Show/hide
Query:  KGEGEQGTNNTQYKQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLA
        +GE +  T   + K     +C E EGFGH Q+EC  +LKRKKKSL  TL  +E+ + SD EE GM L+     S  +  E  E+  + V D    A+ L 
Subjt:  KGEGEQGTNNTQYKQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLA

Query:  SDLSADYVYAKGQEDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKGKVAFVQ
          L+   +  K +ED   +  Q++RIQ L+ +N   LS+I TLK EL+  +  FE LSKS++M+  GT  L+ +L   K   D++G+GF+         +
Subjt:  SDLSADYVYAKGQEDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKGKVAFVQ

Query:  TVFV
        TVFV
Subjt:  TVFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGAACTCTAGACTTTTTGATAGAAAAGGAGAAGGTGAACAGGGAACAAACAATACTCAATATAAGCAAGACATAAACTTTAGATGCAGAGAACGTGAAGGTTT
TGGTCATTATCAAGCTGAGTGTCTAAATTTTCTGAAGAGAAAAAAGAAGAGTTTGGCTGTAACTCTTTTTGGTGATGAATCAGTTGCGAGTAGTGACTGTGAAGAAAATG
GTATGGCATTGCTTAGGGGTATCTCTGAAAGTGTTGTCGTGAAGACTGAGAATTGTGAGTCACAGAAGAATGATGTGAAAGATGTTGTTTCTTTCGCTGAACCTTTAGCT
AGTGACTTAAGTGCTGACTATGTGTACGCAAAGGGGCAAGAGGACATAGTGGTGCTGAAACAACAAAAAGATAGGATACAATGCCTTTTGACAGATAATCATCGTTTATT
ATCCACGATATCTACCTTAAAGCAGGAGCTGAGGGTTGTTCAAATGGATTTTGAGTCTTTATCCAAGTCTGTTCGAATGCTTAATTTTGGTACTGATGATCTAAACTCAA
TCTTGAAGTATGAAAAACCTAAAGTTGATCGAAAAGGTGTTGGTTTCAACCATGATAAAGGAAAAGTTGCTTTTGTGCAAACTGTTTTCGTTCCTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAGAACTCTAGACTTTTTGATAGAAAAGGAGAAGGTGAACAGGGAACAAACAATACTCAATATAAGCAAGACATAAACTTTAGATGCAGAGAACGTGAAGGTTT
TGGTCATTATCAAGCTGAGTGTCTAAATTTTCTGAAGAGAAAAAAGAAGAGTTTGGCTGTAACTCTTTTTGGTGATGAATCAGTTGCGAGTAGTGACTGTGAAGAAAATG
GTATGGCATTGCTTAGGGGTATCTCTGAAAGTGTTGTCGTGAAGACTGAGAATTGTGAGTCACAGAAGAATGATGTGAAAGATGTTGTTTCTTTCGCTGAACCTTTAGCT
AGTGACTTAAGTGCTGACTATGTGTACGCAAAGGGGCAAGAGGACATAGTGGTGCTGAAACAACAAAAAGATAGGATACAATGCCTTTTGACAGATAATCATCGTTTATT
ATCCACGATATCTACCTTAAAGCAGGAGCTGAGGGTTGTTCAAATGGATTTTGAGTCTTTATCCAAGTCTGTTCGAATGCTTAATTTTGGTACTGATGATCTAAACTCAA
TCTTGAAGTATGAAAAACCTAAAGTTGATCGAAAAGGTGTTGGTTTCAACCATGATAAAGGAAAAGTTGCTTTTGTGCAAACTGTTTTCGTTCCTGCTTAA
Protein sequenceShow/hide protein sequence
MLENSRLFDRKGEGEQGTNNTQYKQDINFRCREREGFGHYQAECLNFLKRKKKSLAVTLFGDESVASSDCEENGMALLRGISESVVVKTENCESQKNDVKDVVSFAEPLA
SDLSADYVYAKGQEDIVVLKQQKDRIQCLLTDNHRLLSTISTLKQELRVVQMDFESLSKSVRMLNFGTDDLNSILKYEKPKVDRKGVGFNHDKGKVAFVQTVFVPA