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PI0014050 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014050
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr04:22505024..22505660
RNA-Seq ExpressionPI0014050
SyntenyPI0014050
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK03234.1 uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa]3.9e-4151.28Show/hide
Query:  SCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVG
        S L+SW E ++    ++SR  +VNP+S  E++V+D  + F+ KLN  S SC  WD+EEIPC+HAL V+R LNL+ Y +VS++YY   LSATY G + P+G
Subjt:  SCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVG

Query:  THLDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTC
         H DW V +     LPP+F+R AGRPRK+RIP + E + SS+CS C R GHN RTC
Subjt:  THLDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTC

TYK07957.1 hypothetical protein E5676_scaffold265G00780 [Cucumis melo var. makuwa]2.2e-5577.21Show/hide
Query:  VNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTHLDWRVEDEVMKALPPIFKRQ
        V+PIS TEY+V + NQQFI KLN+   SCRVWDVEEIPC+HAL VLRMLNLD Y YVSEFYYRETLS TY+GCI PVG+H DWRV D VMK LPP+FKRQ
Subjt:  VNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTHLDWRVEDEVMKALPPIFKRQ

Query:  AGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTCSK
        AGRP KQRIP V+EFNSS++CSNCNRKGHNSRTC +
Subjt:  AGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTCSK

XP_011654398.1 uncharacterized protein LOC105435382 [Cucumis sativus]3.8e-4458.06Show/hide
Query:  LTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTH
        LTSW E++L  +HE+SR   V+PI+  EY VM  ++Q I KLNLGS SCRVWD  EIPCSHAL VL MLNL+ Y YVS++Y+ +TL +TY G + P+G H
Subjt:  LTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTH

Query:  LDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSS-RCSNCNRKGHNSRTC
         +WR+ ++ + ALPPIFKR  GRP+  R+P + E NSSS RCS+C+ KGHNSRTC
Subjt:  LDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSS-RCSNCNRKGHNSRTC

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]5.1e-4961.29Show/hide
Query:  LTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTH
        LT W EN+LH +HE+SR  +++PI I EY VMD ++QF+ KLN  S S +VWD EEIPCSH L VLR+LN+DIY Y+S +YY   LS TY GC+ PVG H
Subjt:  LTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTH

Query:  LDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSS-RCSNCNRKGHNSRTC
         +WRV D+ ++ALPPIFK  A RP+KQRIP V E  SSS RCS C+ KGHNSRTC
Subjt:  LDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSS-RCSNCNRKGHNSRTC

XP_038904248.1 uncharacterized protein LOC120090597 [Benincasa hispida]3.0e-4961.94Show/hide
Query:  LTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTH
        LT W EN+L  +HE+SR  +V+PI   +Y VMD ++QF+ KLNLGS SCRVWD EEI CSHAL +L +LN+DIY YVS +YY  TLS TY GC+ P+G H
Subjt:  LTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTH

Query:  LDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSS-RCSNCNRKGHNSRTC
         +WRV D+ ++ALPPIFKR AG P+KQRIP   E  SSS RCS C+ KGHNSRTC
Subjt:  LDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSS-RCSNCNRKGHNSRTC

TrEMBL top hitse value%identityAlignment
A0A5A7TGH6 SWIM-type domain-containing protein3.6e-4050.64Show/hide
Query:  SCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVG
        S L+SW E ++    ++SR  +VNP+S  E++V+DE + F+ KLN  S SC  WD+E+IPC HAL V+R LNL+ Y +VS +YY   L ATY G + P+G
Subjt:  SCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVG

Query:  THLDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTC
         H DW V +     LPP+F+R AGRPRK+RIP   E + SS+CS C R GHN RTC
Subjt:  THLDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTC

A0A5A7V9D5 SWIM-type domain-containing protein7.3e-4176.11Show/hide
Query:  SCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVG
        S LTSW EN+L LE EKSR LLV+PIS TEY+V D NQQFI KLN+G  SCRVWD+EEIPC+HALAVLRMLNLD Y YVS+FYYRETLSATY+GC  PVG
Subjt:  SCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVG

Query:  THLDWRVEDEVMK
        +H DWRV D VMK
Subjt:  THLDWRVEDEVMK

A0A5D3BD68 SWIM-type domain-containing protein2.1e-4050.64Show/hide
Query:  SCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVG
        S L+SW E ++    ++SR  +VNP+S  E++V+D  + F+ KLN  S SC  WD+EEIPC+HAL V+R LNL+ Y +VS++YY   LSATY G + P+G
Subjt:  SCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVG

Query:  THLDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTC
         H DW V       LPP+F+R AGRPRK+RIP + E + SS+CS C R  HN RTC
Subjt:  THLDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTC

A0A5D3BVP4 SWIM-type domain-containing protein1.9e-4151.28Show/hide
Query:  SCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVG
        S L+SW E ++    ++SR  +VNP+S  E++V+D  + F+ KLN  S SC  WD+EEIPC+HAL V+R LNL+ Y +VS++YY   LSATY G + P+G
Subjt:  SCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVG

Query:  THLDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTC
         H DW V +     LPP+F+R AGRPRK+RIP + E + SS+CS C R GHN RTC
Subjt:  THLDWRVEDEVMKALPPIFKRQAGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTC

A0A5D3C7L7 Uncharacterized protein1.0e-5577.21Show/hide
Query:  VNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTHLDWRVEDEVMKALPPIFKRQ
        V+PIS TEY+V + NQQFI KLN+   SCRVWDVEEIPC+HAL VLRMLNLD Y YVSEFYYRETLS TY+GCI PVG+H DWRV D VMK LPP+FKRQ
Subjt:  VNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTHLDWRVEDEVMKALPPIFKRQ

Query:  AGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTCSK
        AGRP KQRIP V+EFNSS++CSNCNRKGHNSRTC +
Subjt:  AGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTCSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase1.8e-0729.59Show/hide
Query:  LVNPISITEYKVMD--ENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTHLDWRVEDEVMKALPP
        ++  +    +KV +  E +++I +LN+ + +CR +   + PC HALAV   L ++   YV E Y  E    TY+    PV     W  +  V    PP
Subjt:  LVNPISITEYKVMD--ENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTHLDWRVEDEVMKALPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTTTGACTTCTTGGGTTGAGAATGTTTTGCATTTAGAACATGAAAAGTCAAGAATTTTATTGGTCAATCCAATTAGTATCACTGAATACAAAGTAATGGATGA
AAATCAACAGTTCATTGACAAGTTAAACTTGGGATCTTATAGCTGTCGAGTATGGGATGTTGAGGAAATTCCATGTTCACATGCACTTGCTGTTTTACGAATGCTTAATT
TAGATATATATTTGTATGTATCTGAGTTTTATTATAGAGAAACATTATCAGCAACATACAGTGGCTGTATTCATCCTGTTGGGACGCATTTGGATTGGAGAGTTGAAGAC
GAAGTCATGAAAGCATTACCTCCAATCTTTAAACGTCAAGCTGGAAGACCAAGAAAACAAAGAATTCCATTTGTAGATGAATTTAATAGTTCATCAAGATGTTCCAATTG
TAACCGTAAAGGACACAATAGTAGGACTTGCAGCAAAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTTTGACTTCTTGGGTTGAGAATGTTTTGCATTTAGAACATGAAAAGTCAAGAATTTTATTGGTCAATCCAATTAGTATCACTGAATACAAAGTAATGGATGA
AAATCAACAGTTCATTGACAAGTTAAACTTGGGATCTTATAGCTGTCGAGTATGGGATGTTGAGGAAATTCCATGTTCACATGCACTTGCTGTTTTACGAATGCTTAATT
TAGATATATATTTGTATGTATCTGAGTTTTATTATAGAGAAACATTATCAGCAACATACAGTGGCTGTATTCATCCTGTTGGGACGCATTTGGATTGGAGAGTTGAAGAC
GAAGTCATGAAAGCATTACCTCCAATCTTTAAACGTCAAGCTGGAAGACCAAGAAAACAAAGAATTCCATTTGTAGATGAATTTAATAGTTCATCAAGATGTTCCAATTG
TAACCGTAAAGGACACAATAGTAGGACTTGCAGCAAAGTGTGA
Protein sequenceShow/hide protein sequence
MSCLTSWVENVLHLEHEKSRILLVNPISITEYKVMDENQQFIDKLNLGSYSCRVWDVEEIPCSHALAVLRMLNLDIYLYVSEFYYRETLSATYSGCIHPVGTHLDWRVED
EVMKALPPIFKRQAGRPRKQRIPFVDEFNSSSRCSNCNRKGHNSRTCSKV