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PI0014071 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014071
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description30S ribosomal protein S11, chloroplastic
Genome locationchr02:5588408..5588824
RNA-Seq ExpressionPI0014071
SyntenyPI0014071
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR001971 - Ribosomal protein S11
IPR018102 - Ribosomal S11, conserved site
IPR019981 - Ribosomal protein S11, bacterial-type
IPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM89651.1 ribosomal protein S11 [Lagenaria siceraria]6.8e-6694.2Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSF+RDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

YP_004841816.1 ribosomal protein S11 [Cucumis melo subsp. melo]6.8e-6694.2Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSF+RDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

YP_009751771.1 ribosomal protein S11 [Herpetospermum pedunculosum]5.2e-6694.93Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSFVRDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

YP_009752276.1 ribosomal protein S11 [Trichosanthes baviensis]5.2e-6694.2Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSF+RDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

YP_009753907.1 ribosomal protein S11 [Trichosanthes lobata]1.5e-6593.48Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAV+DQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSF+RDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

TrEMBL top hitse value%identityAlignment
A0A410HFC3 30S ribosomal protein S11, chloroplastic3.3e-6694.2Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSF+RDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

A0A6B9M5Z9 30S ribosomal protein S11, chloroplastic2.5e-6694.93Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSFVRDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

A0A6H0EQE1 30S ribosomal protein S11, chloroplastic2.5e-6694.2Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSF+RDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

A0A6H0ES45 30S ribosomal protein S11, chloroplastic2.5e-6694.93Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSFVRDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

A0A6H0EWD9 30S ribosomal protein S11, chloroplastic2.5e-6694.2Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSF+RDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

SwissProt top hitse value%identityAlignment
A0ZZ68 30S ribosomal protein S11, chloroplastic8.4e-6791.3Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIP++GSRRNGR S+RKS RRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSFVRDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

Q0G9S9 30S ribosomal protein S11, chloroplastic7.1e-6689.86Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAK IPRIGSR+NGRI SRK+TRRIPKG IHVQASFNNTIVTVTDVRGRV+SWSS GTCGFKG RRGTPF AQ AAGNAIR VVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILL+FVRDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

Q0ZIY6 30S ribosomal protein S11, chloroplastic6.4e-6791.3Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRI SRKS RRIPKG IHVQASFNNTIVTVTDVRGRV+SWSS GTCGF+G RRGTPF AQ AAGNAIR VVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSFVRDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

Q2L937 30S ribosomal protein S11, chloroplastic8.4e-6791.3Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIP++GSRRNGR S+RKS RRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIRAVVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSFVRDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

Q4VZK2 30S ribosomal protein S11, chloroplastic2.6e-6893.48Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPIPRIGSRRNGRISSRKSTRRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGFKG RRGTPF AQ AAGNAIR VVDQGMQRAEVMIKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSF+RDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV

Arabidopsis top hitse value%identityAlignment
AT1G31817.1 Ribosomal L18p/L5e family protein5.3e-0832.77Show/hide
Query:  IHVQASFNNTIVTVTDVRGRVISWSSTGTC-GFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKG-PGLGRDTALRAIRRSGILLS--------FV
        IH++   NNT VTVTD +G V   +++G+    KG R+ T + A   A N  R     G++   V + G    G+        R G   S        ++
Subjt:  IHVQASFNNTIVTVTDVRGRVISWSSTGTC-GFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKG-PGLGRDTALRAIRRSGILLS--------FV

Query:  RDVTPMPHNGCRPPKKRGV
         D T   HNGCR P+KR V
Subjt:  RDVTPMPHNGCRPPKKRGV

AT2G36160.1 Ribosomal protein S11 family protein8.7e-1134.51Show/hide
Query:  GFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKG-RRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMI--------KGPGLGRDTALRAIRRSGILLSF
        G +H+ ASFN+T + VTD+ GR      TG    K  R   +P+ A +AA +  +   + G+    V +        K PG G  +ALRA+ RSG+ +  
Subjt:  GFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKG-RRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMI--------KGPGLGRDTALRAIRRSGILLSF

Query:  VRDVTPMPHNGCR
        + DVTP+P +  R
Subjt:  VRDVTPMPHNGCR

AT3G11510.1 Ribosomal protein S11 family protein8.7e-1134.51Show/hide
Query:  GFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKG-RRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMI--------KGPGLGRDTALRAIRRSGILLSF
        G +H+ ASFN+T + VTD+ GR      TG    K  R   +P+ A +AA +  +   + G+    V +        K PG G  +ALRA+ RSG+ +  
Subjt:  GFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKG-RRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMI--------KGPGLGRDTALRAIRRSGILLSF

Query:  VRDVTPMPHNGCR
        + DVTP+P +  R
Subjt:  VRDVTPMPHNGCR

AT3G52580.1 Ribosomal protein S11 family protein6.7e-1135.4Show/hide
Query:  GFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKG-RRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMI--------KGPGLGRDTALRAIRRSGILLSF
        G +HV ASFN+T + VTD+ GR      TG    K  R   +P+ A +AA +  +   + G+    V +        K PG G  +ALRA+ RSG+ +  
Subjt:  GFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKG-RRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMI--------KGPGLGRDTALRAIRRSGILLSF

Query:  VRDVTPMPHNGCR
        + DVTP+P +  R
Subjt:  VRDVTPMPHNGCR

ATCG00750.1 ribosomal protein S111.8e-6488.41Show/hide
Query:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL
        MAKPI RIGSR+N R  SRK+ RRIPKG IHVQASFNNTIVTVTDVRGRVISWSS GTCGF+G RRGTPF AQ AAGNAIRAVVDQGMQRAEV IKGPGL
Subjt:  MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGL

Query:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV
        GRD ALRAIRRSGILLSFVRDVTPMPHNGCRPPKKR V
Subjt:  GRDTALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAACCCATACCAAGAATCGGTTCACGTAGAAATGGACGTATTAGCTCACGTAAAAGTACGCGTAGAATACCAAAGGGCTTTATTCATGTTCAAGCAAGTTTCAA
CAATACAATTGTGACTGTTACAGATGTACGGGGTCGGGTAATTTCTTGGTCCTCTACCGGTACGTGTGGATTCAAAGGTAGAAGAAGAGGGACACCATTTCCCGCTCAAA
TCGCAGCAGGAAATGCTATTCGGGCAGTAGTGGATCAAGGGATGCAACGAGCCGAAGTTATGATAAAGGGCCCTGGTCTCGGACGAGATACAGCATTAAGAGCTATTCGG
AGAAGCGGCATACTATTAAGTTTCGTACGGGATGTAACCCCTATGCCACATAATGGTTGTAGGCCCCCTAAAAAACGAGGTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAACCCATACCAAGAATCGGTTCACGTAGAAATGGACGTATTAGCTCACGTAAAAGTACGCGTAGAATACCAAAGGGCTTTATTCATGTTCAAGCAAGTTTCAA
CAATACAATTGTGACTGTTACAGATGTACGGGGTCGGGTAATTTCTTGGTCCTCTACCGGTACGTGTGGATTCAAAGGTAGAAGAAGAGGGACACCATTTCCCGCTCAAA
TCGCAGCAGGAAATGCTATTCGGGCAGTAGTGGATCAAGGGATGCAACGAGCCGAAGTTATGATAAAGGGCCCTGGTCTCGGACGAGATACAGCATTAAGAGCTATTCGG
AGAAGCGGCATACTATTAAGTTTCGTACGGGATGTAACCCCTATGCCACATAATGGTTGTAGGCCCCCTAAAAAACGAGGTGTGTAA
Protein sequenceShow/hide protein sequence
MAKPIPRIGSRRNGRISSRKSTRRIPKGFIHVQASFNNTIVTVTDVRGRVISWSSTGTCGFKGRRRGTPFPAQIAAGNAIRAVVDQGMQRAEVMIKGPGLGRDTALRAIR
RSGILLSFVRDVTPMPHNGCRPPKKRGV