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PI0014094 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014094
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr01:10124255..10124765
RNA-Seq ExpressionPI0014094
SyntenyPI0014094
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.6e-5870.51Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KV KCGVCGL+GHPNDK P+++E+ N++RKYDPHGNTYN GWRDNPNL+WGND Q+  QA S+S+NQG+NLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRK
         EMKQQM+QLT AISK++GKGKL AQ ++ANVS +SLR+GKIL TP ++EK    K
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRK

KAA0065554.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.2e-5972.85Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KV KCGVCGL+GHPNDKYP+++E+ N++R+YDPHGNTYN GWRDNP L+WGND Q+  QA S+S+NQG+NLED++KALA NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEK
         EMKQQM+QLT AISK++GKGKLPAQ +HANVS ISLR+GKIL TP ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEK

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.6e-5872.67Show/hide
Query:  TTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQN
        TTLLTSFVQG  +KV KCGVCGL+GH N+K P+++E+ N++R+YDPH NTYN GWRDNPNL+WGND Q+  QA S+S+NQG+NLED++KALATNT+SFQ 
Subjt:  TTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQN

Query:  EMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEK
        EMKQQM+QLT AISK++GKGKLPAQLDHANVS ISLR+GKIL TP ++EK
Subjt:  EMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEK

TYK10613.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.6e-5870.44Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ
        MTTLLTSFVQG   KV KCGVCGL+GHPNDK P+++E+ N++R+YDPHGNTYN+GWRD PNL+WGND Q   QA S+S+NQG+NLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRKRKK
         EMKQQM+QLT AISK++GKGKLPAQ DHANVS ISLR+GKIL TP ++EK K+  +K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRKRKK

TYK29265.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-5870.44Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KV KCGVCGL+GHPNDKYP+++E+ N++R+YDPHGNTYN GWRDNP L+WGND Q+  QA S+S+NQG+NLED++KALA NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRKRKK
         EMKQQM+QLT AISK++GKGKLPAQ +HANVS ISLR+GKIL TP ++EK K+  +K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRKRKK

TrEMBL top hitse value%identityAlignment
A0A5A7VE49 Retrotransposon gag protein1.6e-5972.85Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KV KCGVCGL+GHPNDKYP+++E+ N++R+YDPHGNTYN GWRDNP L+WGND Q+  QA S+S+NQG+NLED++KALA NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEK
         EMKQQM+QLT AISK++GKGKLPAQ +HANVS ISLR+GKIL TP ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEK

A0A5A7VQ60 Retrotransposon gag protein1.7e-5872.67Show/hide
Query:  TTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQN
        TTLLTSFVQG  +KV KCGVCGL+GH N+K P+++E+ N++R+YDPH NTYN GWRDNPNL+WGND Q+  QA S+S+NQG+NLED++KALATNT+SFQ 
Subjt:  TTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQN

Query:  EMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEK
        EMKQQM+QLT AISK++GKGKLPAQLDHANVS ISLR+GKIL TP ++EK
Subjt:  EMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEK

A0A5D3CFE7 Retrotransposon gag protein1.7e-5870.44Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ
        MTTLLTSFVQG   KV KCGVCGL+GHPNDK P+++E+ N++R+YDPHGNTYN+GWRD PNL+WGND Q   QA S+S+NQG+NLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRKRKK
         EMKQQM+QLT AISK++GKGKLPAQ DHANVS ISLR+GKIL TP ++EK K+  +K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRKRKK

A0A5D3CRR8 Retrotransposon gag protein1.7e-5870.51Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KV KCGVCGL+GHPNDK P+++E+ N++RKYDPHGNTYN GWRDNPNL+WGND Q+  QA S+S+NQG+NLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRK
         EMKQQM+QLT AISK++GKGKL AQ ++ANVS +SLR+GKIL TP ++EK    K
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRK

A0A5D3E1D2 Retrotransposon gag protein5.9e-5970.44Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KV KCGVCGL+GHPNDKYP+++E+ N++R+YDPHGNTYN GWRDNP L+WGND Q+  QA S+S+NQG+NLED++KALA NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRKRKK
         EMKQQM+QLT AISK++GKGKLPAQ +HANVS ISLR+GKIL TP ++EK K+  +K+
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRKRKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACATTGCTTACTTCTTTTGTACAAGGTGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTAATAGGACATCCTAATGACAAGTATCCCGACCTTGTGGA
AGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGGAACACTTACAATGTCGGTTGGAGAGACAACCCTAACCTTAAATGGGGAAATGACACCCAACGACCCGCACAAG
CAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAACACAATCTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTA
ACCAACGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCTCGATCACGCAAATGTAAGTGTCATCTCGCTTAGAAACGGTAAAATCCTGCAAACCCCTCC
AAGCGAAGAAAAGATGAAAATAAGAAAAAGGAAGAAAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTACATTGCTTACTTCTTTTGTACAAGGTGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTAATAGGACATCCTAATGACAAGTATCCCGACCTTGTGGA
AGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGGAACACTTACAATGTCGGTTGGAGAGACAACCCTAACCTTAAATGGGGAAATGACACCCAACGACCCGCACAAG
CAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAACACAATCTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTA
ACCAACGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCTCGATCACGCAAATGTAAGTGTCATCTCGCTTAGAAACGGTAAAATCCTGCAAACCCCTCC
AAGCGAAGAAAAGATGAAAATAAGAAAAAGGAAGAAAATCTAG
Protein sequenceShow/hide protein sequence
MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKYPDLVEEANVIRKYDPHGNTYNVGWRDNPNLKWGNDTQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
TNAISKLEGKGKLPAQLDHANVSVISLRNGKILQTPPSEEKMKIRKRKKI