; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014100 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014100
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description50S ribosomal protein L35
Genome locationchr08:23261448..23262128
RNA-Seq ExpressionPI0014100
SyntenyPI0014100
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044224.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]1.2e-4684.92Show/hide
Query:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER
        MAI HRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESR+LVQRRRTLKSRMLSFVKKHLG  RSKIPH+ESK Q WHVG    
Subjt:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER

Query:  RCVAAFGVGLGYLVALKTQIGLANAI
              GVG GYLVALKTQIGLANA+
Subjt:  RCVAAFGVGLGYLVALKTQIGLANAI

KAE8650972.1 hypothetical protein Csa_002588 [Cucumis sativus]2.2e-8091.76Show/hide
Query:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER
        MAI HRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SRIL+QRRRTLKSRMLSFVKKHLGHRRSK PHAES+ +SWHVG LER
Subjt:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER

Query:  RCVAAFGVGLGY-LVALKTQIGLANAIRPSFSSIIWVYLCVFVLWLHKCKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRHFL
        RCVAAFGVGLGY +VALKTQI LANAI PSFSSIIWVYLCVFVLWL KCKYLWAMLLLIPLFPLLLFQLDTFVHLLHLR FL
Subjt:  RCVAAFGVGLGY-LVALKTQIGLANAIRPSFSSIIWVYLCVFVLWLHKCKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRHFL

TYK24910.1 50S ribosomal protein L35 [Cucumis melo var. makuwa]1.3e-4586.78Show/hide
Query:  HRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLERRCVA
        HRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESR+LVQRRRTLKSRMLSFVKKHLG  RSKIPH+ESK QSWHVG        
Subjt:  HRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLERRCVA

Query:  AFGVGLGYLVALKTQIGLANA
          GVG GYLVALKTQIGLANA
Subjt:  AFGVGLGYLVALKTQIGLANA

XP_008442323.1 PREDICTED: uncharacterized protein LOC103486229 [Cucumis melo]4.7e-7586.67Show/hide
Query:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER
        MAI HRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESR+LVQRRRTLKSRMLSFVKKHLG  RSKIPH+ESK QSWHVG    
Subjt:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER

Query:  RCVAAFGVGLGYLVALKTQIGLANAIRPSFSSIIWVYLCVFVLWLHKCKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRHF
              GVG GYLVALKTQIGLANA+  SFSSIIWVYLCVFV+WL KCKYLWA+LLL+PLFPLLLFQLDTFVHLLHLRHF
Subjt:  RCVAAFGVGLGYLVALKTQIGLANAIRPSFSSIIWVYLCVFVLWLHKCKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRHF

XP_038906422.1 uncharacterized protein LOC120092221 [Benincasa hispida]7.3e-6880.54Show/hide
Query:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER
        MA+  RRSFKI+VHAKICNLYIKLKATLK PSGK QRLLKLDKLLI  DSKSES ILVQRRRTLKSRMLSFVKKHLG  RSK+PHAES+NQSW VGR+E 
Subjt:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER

Query:  RCVAAFGVGLGYLVALKTQIGLANAIRPSFSSIIWVYLC--VFVLWLHKCK--YLWAMLLLIPLFPLLLFQLDTFVHLLHLRHFL
        RCVA FGVGLGYL+AL T IGL NAI PSFSS IWV LC  +FVLWLHKCK  YLWA+L LI L PL L QLD FVHLLHLRHFL
Subjt:  RCVAAFGVGLGYLVALKTQIGLANAIRPSFSSIIWVYLC--VFVLWLHKCK--YLWAMLLLIPLFPLLLFQLDTFVHLLHLRHFL

TrEMBL top hitse value%identityAlignment
A0A0A0LCL9 50S ribosomal protein L353.0e-5990.71Show/hide
Query:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER
        MAI HRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SRIL+QRRRTLKSRMLSFVKKHLGHRRSK PHAES+ +SWHVG LER
Subjt:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER

Query:  RCVAAFGVGLGY-LVALKTQIGLANAIRPSFSSIIWVYLC
        RCVAAFGVGLGY +VALKTQI LANAI PSFSSIIWVYLC
Subjt:  RCVAAFGVGLGY-LVALKTQIGLANAIRPSFSSIIWVYLC

A0A1S3B4Y8 uncharacterized protein LOC1034862292.3e-7586.67Show/hide
Query:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER
        MAI HRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESR+LVQRRRTLKSRMLSFVKKHLG  RSKIPH+ESK QSWHVG    
Subjt:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER

Query:  RCVAAFGVGLGYLVALKTQIGLANAIRPSFSSIIWVYLCVFVLWLHKCKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRHF
              GVG GYLVALKTQIGLANA+  SFSSIIWVYLCVFV+WL KCKYLWA+LLL+PLFPLLLFQLDTFVHLLHLRHF
Subjt:  RCVAAFGVGLGYLVALKTQIGLANAIRPSFSSIIWVYLCVFVLWLHKCKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRHF

A0A5A7TM08 RING-H2 finger protein ATL74-like5.9e-4784.92Show/hide
Query:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER
        MAI HRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESR+LVQRRRTLKSRMLSFVKKHLG  RSKIPH+ESK Q WHVG    
Subjt:  MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLER

Query:  RCVAAFGVGLGYLVALKTQIGLANAI
              GVG GYLVALKTQIGLANA+
Subjt:  RCVAAFGVGLGYLVALKTQIGLANAI

A0A5D3DNQ2 50S ribosomal protein L356.5e-4686.78Show/hide
Query:  HRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLERRCVA
        HRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESR+LVQRRRTLKSRMLSFVKKHLG  RSKIPH+ESK QSWHVG        
Subjt:  HRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLERRCVA

Query:  AFGVGLGYLVALKTQIGLANA
          GVG GYLVALKTQIGLANA
Subjt:  AFGVGLGYLVALKTQIGLANA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATAAGTCATCGGCGGTCATTCAAAATCAGTGTTCATGCCAAGATCTGTAACCTTTATATCAAGCTGAAGGCCACTCTGAAACTCCCTTCCGGGAAATTCCAACG
CCTCCTAAAGCTTGATAAACTACTCATCGAAGTGGATTCCAAATCCGAATCTCGGATCCTCGTTCAACGGCGACGGACTTTGAAATCTCGAATGCTGAGCTTCGTCAAGA
AGCATTTGGGGCATCGCCGATCTAAAATCCCACATGCCGAATCTAAAAATCAATCTTGGCATGTTGGCCGTCTGGAACGAAGGTGTGTGGCTGCTTTTGGTGTGGGATTG
GGTTATCTGGTTGCACTCAAGACACAAATTGGGCTTGCAAATGCAATTCGTCCCAGCTTCAGCTCCATTATATGGGTTTACCTGTGTGTATTTGTTTTATGGCTCCACAA
ATGTAAGTACCTTTGGGCAATGTTATTGCTAATTCCTCTGTTTCCTCTCTTACTTTTCCAATTGGATACATTTGTACATCTTTTACATTTACGCCACTTTTTATAA
mRNA sequenceShow/hide mRNA sequence
GTTGCAATGGCGATAAGTCATCGGCGGTCATTCAAAATCAGTGTTCATGCCAAGATCTGTAACCTTTATATCAAGCTGAAGGCCACTCTGAAACTCCCTTCCGGGAAATT
CCAACGCCTCCTAAAGCTTGATAAACTACTCATCGAAGTGGATTCCAAATCCGAATCTCGGATCCTCGTTCAACGGCGACGGACTTTGAAATCTCGAATGCTGAGCTTCG
TCAAGAAGCATTTGGGGCATCGCCGATCTAAAATCCCACATGCCGAATCTAAAAATCAATCTTGGCATGTTGGCCGTCTGGAACGAAGGTGTGTGGCTGCTTTTGGTGTG
GGATTGGGTTATCTGGTTGCACTCAAGACACAAATTGGGCTTGCAAATGCAATTCGTCCCAGCTTCAGCTCCATTATATGGGTTTACCTGTGTGTATTTGTTTTATGGCT
CCACAAATGTAAGTACCTTTGGGCAATGTTATTGCTAATTCCTCTGTTTCCTCTCTTACTTTTCCAATTGGATACATTTGTACATCTTTTACATTTACGCCACTTTTTAT
AACATATTTCTTTTTTTTCCTTATTCTA
Protein sequenceShow/hide protein sequence
MAISHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRILVQRRRTLKSRMLSFVKKHLGHRRSKIPHAESKNQSWHVGRLERRCVAAFGVGL
GYLVALKTQIGLANAIRPSFSSIIWVYLCVFVLWLHKCKYLWAMLLLIPLFPLLLFQLDTFVHLLHLRHFL