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PI0014104 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014104
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionVillin-1
Genome locationchr06:12219837..12220299
RNA-Seq ExpressionPI0014104
SyntenyPI0014104
Gene Ontology termsGO:0051014 - actin filament severing (biological process)
GO:0051693 - actin filament capping (biological process)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR007122 - Villin/Gelsolin
IPR007123 - Gelsolin-like domain
IPR029006 - ADF-H/Gelsolin-like domain superfamily
IPR030010 - Villin-1-like, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061837.1 villin-1 [Cucumis melo var. makuwa]2.8e-4791.43Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKG IEDPHLFVLNISEGISNVK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
          F++
Subjt:  NLFSR

TYK15419.1 villin-1 [Cucumis melo var. makuwa]4.4e-4588.57Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKG IEDPHLFVLNISEG   VK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
          F++
Subjt:  NLFSR

XP_004143215.1 villin-1 [Cucumis sativus]9.0e-4689.52Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VSGSLNSSYCYILQTGT IFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKG IEDPHLFVLNISEG   VK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
          F++
Subjt:  NLFSR

XP_008464046.1 PREDICTED: villin-1 [Cucumis melo]4.4e-4588.57Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKG IEDPHLFVLNISEG   VK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
          F++
Subjt:  NLFSR

XP_038901595.1 villin-1 isoform X2 [Benincasa hispida]7.1e-4382.86Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VS SLNSSYCYILQTG+ +FTWIGSLSSTRDHEILDRMVEMINPTWQPVS+REGSEPDLFWE+L GKSEYQKGKE KG IEDPHLFVLNISEG   VK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
          F++
Subjt:  NLFSR

TrEMBL top hitse value%identityAlignment
A0A0A0KC54 HP domain-containing protein4.3e-4689.52Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VSGSLNSSYCYILQTGT IFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKG IEDPHLFVLNISEG   VK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
          F++
Subjt:  NLFSR

A0A1S3CKK6 villin-12.2e-4588.57Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKG IEDPHLFVLNISEG   VK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
          F++
Subjt:  NLFSR

A0A5A7V4K5 Villin-11.3e-4791.43Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKG IEDPHLFVLNISEGISNVK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
          F++
Subjt:  NLFSR

A0A5D3CZ09 Villin-12.2e-4588.57Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VSGSLNSSYCYILQTG  IFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKG IEDPHLFVLNISEG   VK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
          F++
Subjt:  NLFSR

A0A6J1D3W7 villin-11.3e-4283.81Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VS SLNSSYCYILQT T IFTWIGSLSSTRDHEILDRMV+MINPTWQPVS+REGSEPDLFWE L GKSEYQKGKEAKG IEDPHLFVLNISEG   VK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
          F++
Subjt:  NLFSR

SwissProt top hitse value%identityAlignment
B8ATT7 Villin-45.7e-1942.86Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        VS SLNSSYCYIL  G  +FTW G+L+++ D+++++R +++I P     S +EG E D FWE+L GK +Y   K  K    DPHLF   +S+    VK  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFSR
        + F++
Subjt:  NLFSR

B8AY58 Villin-11.4e-2550.96Show/hide
Query:  SGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSSN
        + SLNSS+CYILQ G   FTW+GSLSS  DH +LDRM++ + P  Q + +REGSEPD FWE L G+SEY K K+ K    DPHL+  +  +G+   K   
Subjt:  SGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSSN

Query:  LFSR
         FS+
Subjt:  LFSR

O81643 Villin-16.3e-2656.12Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVK
        V+ SLNSSY YILQ G   FTWIG LSS  DHE+LDRM+  ++ + QP+ IREG+E D FW +L GKSEY K KE +  IE+PHLF  + S  +  VK
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVK

Q0DKN3 Villin-15.3e-2550Show/hide
Query:  SGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSSN
        + SLNSS+CYILQ G   FTW+GSLSS  DH +LDRM++ + P  Q + +REGSEPD FWE L G+SEY + K+ K    DPHL+  +  +G+   K   
Subjt:  SGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSSN

Query:  LFSR
         FS+
Subjt:  LFSR

Q67U26 Villin-33.6e-2149.47Show/hide
Query:  SLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVK
        SLNSSYCY+L  G  +FTWIG+LSS+ D E+ +R +++I P  Q   ++EGSE D FW++L  KSEY   K AK    DPHLF    S+G+  V+
Subjt:  SLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVK

Arabidopsis top hitse value%identityAlignment
AT2G29890.1 villin-like 14.5e-2756.12Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVK
        V+ SLNSSY YILQ G   FTWIG LSS  DHE+LDRM+  ++ + QP+ IREG+E D FW +L GKSEY K KE +  IE+PHLF  + S  +  VK
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVK

AT2G29890.2 villin-like 14.5e-2752.88Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        V+ SLNSSY YILQ G   FTWIG LSS  DHE+LDRM+  ++ + QP+ IREG+E D FW +L GKSEY K KE +  IE+PHLF  + S G   +K  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFS
         +++
Subjt:  NLFS

AT2G29890.3 villin-like 14.5e-2752.88Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS
        V+ SLNSSY YILQ G   FTWIG LSS  DHE+LDRM+  ++ + QP+ IREG+E D FW +L GKSEY K KE +  IE+PHLF  + S G   +K  
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSS

Query:  NLFS
         +++
Subjt:  NLFS

AT4G30160.2 villin 41.2e-1942.86Show/hide
Query:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVK
        V+ SLNSSY YIL   + +FTW G+LS+  D E+ +R +++I P  Q  + +EGSE + FWE+L GK+EY   K  K    DPHLF    ++ +  V+
Subjt:  VSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVK

AT5G57320.1 villin, putative2.0e-1940.78Show/hide
Query:  SGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSSN
        S  LNSS+CYIL   + +FTW G+L+S+ D E+++RM+++I P     + +EGSE + FWE+L GKSEY   K  +    DPHLF    +    ++K++ 
Subjt:  SGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSSN

Query:  LFS
        +F+
Subjt:  LFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGACAAGAAAGTATTGCAGGTGTCAGGTTCCCTAAATTCATCCTACTGTTATATTCTTCAAACTGGAACAGGCATTTTCACTTGGATTGGCAGTCTCTCTTC
AACCAGAGACCATGAAATTCTAGACAGGATGGTGGAAATGATAAATCCAACATGGCAACCTGTATCAATCAGGGAAGGGAGTGAGCCTGATTTATTCTGGGAAGTACTTG
ATGGAAAGTCAGAGTATCAAAAGGGAAAGGAGGCCAAAGGGGCCATTGAAGATCCACATTTATTTGTCTTGAACATCAGCGAAGGTATTAGCAATGTTAAATCTTCTAAT
CTATTTTCGAGGGGAAATGCACCTCAGTTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGACAAGAAAGTATTGCAGGTGTCAGGTTCCCTAAATTCATCCTACTGTTATATTCTTCAAACTGGAACAGGCATTTTCACTTGGATTGGCAGTCTCTCTTC
AACCAGAGACCATGAAATTCTAGACAGGATGGTGGAAATGATAAATCCAACATGGCAACCTGTATCAATCAGGGAAGGGAGTGAGCCTGATTTATTCTGGGAAGTACTTG
ATGGAAAGTCAGAGTATCAAAAGGGAAAGGAGGCCAAAGGGGCCATTGAAGATCCACATTTATTTGTCTTGAACATCAGCGAAGGTATTAGCAATGTTAAATCTTCTAAT
CTATTTTCGAGGGGAAATGCACCTCAGTTTGGTTGA
Protein sequenceShow/hide protein sequence
MDFDKKVLQVSGSLNSSYCYILQTGTGIFTWIGSLSSTRDHEILDRMVEMINPTWQPVSIREGSEPDLFWEVLDGKSEYQKGKEAKGAIEDPHLFVLNISEGISNVKSSN
LFSRGNAPQFG