CuGenDBv2

Gene ID	PI0014130
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	DNA-directed RNA polymerase subunit alpha
Genome location	chr02:5588892..5589662
RNA-Seq Expression	PI0014130
Synteny	PI0014130
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0009536 - plastid (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR011262 - DNA-directed RNA polymerase, insert domain IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type IPR011773 - DNA-directed RNA polymerase, alpha subunit IPR036603 - RNA polymerase, RBP11-like subunit IPR036643 - DNA-directed RNA polymerase, insert domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QHB75996.1 RNA polymerase alpha subunit [Cucumis melo subsp. melo]

1.1e-83

73.8

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANL EPINLCIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLF
        LEIWTNGSLTPKEALHEASRNLID    F
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLF

QJF46416.1 RNA polymerase alpha subunit [Cucumis melo]

1.4e-83

70.25

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANL EPIN CIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKKTSIFE
        LEIWTNGSLTPKEALHEASRNLID    F   +++K+   F+
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKKTSIFE

YP_004841815.1 RNA polymerase alpha subunit [Cucumis melo subsp. melo]

1.4e-83

70.25

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANL EPIN CIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKKTSIFE
        LEIWTNGSLTPKEALHEASRNLID    F   +++K+   F+
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKKTSIFE

YP_009004075.1 RNA polymerase alpha subunit [Cucumis hystrix]

1.7e-84

72.57

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK
        LEIWTNGSLTPKEALHEASRNLID LF+ ++  +++K
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK

YP_009346515.1 RNA polymerase alpha subunit [Cucumis x hytivus]

1.7e-84

72.57

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK
        LEIWTNGSLTPKEALHEASRNLID LF+ ++  +++K
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK

TrEMBL top hits

e value

%identity

Alignment

A0A1P8C7R7 DNA-directed RNA polymerase subunit alpha

8.2e-85

72.57

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK
        LEIWTNGSLTPKEALHEASRNLID LF+ ++  +++K
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK

A0A1X9Q1P4 DNA-directed RNA polymerase subunit alpha

8.2e-85

72.57

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK
        LEIWTNGSLTPKEALHEASRNLID LF+ ++  +++K
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK

A0A218KG62 DNA-directed RNA polymerase subunit alpha

8.2e-85

72.57

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK
        LEIWTNGSLTPKEALHEASRNLID LF+ ++  +++K
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK

A0A4Y5RDR4 DNA-directed RNA polymerase subunit alpha

8.2e-85

72.57

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK
        LEIWTNGSLTPKEALHEASRNLID LF+ ++  +++K
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK

W8E706 DNA-directed RNA polymerase subunit alpha

8.2e-85

72.57

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK
        LEIWTNGSLTPKEALHEASRNLID LF+ ++  +++K
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK

SwissProt top hits

e value

%identity

Alignment

Q09WY5 DNA-directed RNA polymerase subunit alpha

2.5e-78

66.96

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        M +EK+ VSTR L+WKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPG VTAQDIILPPSVEIVDNTQHIANL EPI LCIEL+IERNRGY I+TPNN ++ SYP+DA+FMPVRN NHSIHSYVNGNENQEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFY
        LEIWTNGSLTPKEALHEASRNLID    F+
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFY

Q2PMQ3 DNA-directed RNA polymerase subunit alpha

2.1e-77

67.25

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALF---------------------------------------------FGIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTL+WKCVESR DSK +    F                                              GI+ESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALF---------------------------------------------FGIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASIC KGPG VTAQDIILPPSVEIVDNTQHIAN+ EP+NLCIELKIERNRGY I+T  N +D SYP+DA FMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLF
        LEIWTNGSLTPKEAL+EASRNLID    F
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLF

Q49KW6 DNA-directed RNA polymerase subunit alpha

5.0e-79

67.69

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREK+RVSTRTL+WKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTR+ASICVKGPGCVTAQDIILP SVEIVDNTQ+IANL EPINLCI L+IERNRGYHI+TP N +D SYP+DA+FMPVRN NHSIHSY NGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLF
        LEIWTNGSLTPKEALHEASRNLID    F
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLF

Q4VZK3 DNA-directed RNA polymerase subunit alpha

2.2e-87

72.57

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREKIRVSTRTLKWKCVESRADSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNN +DASYPMDAIFMPVRNVNHSIHSYVNGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK
        LEIWTNGSLTPKEALHEASRNLID LF+ ++  +++K
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKK

Q9MTJ3 DNA-directed RNA polymerase subunit alpha

9.3e-78

65.94

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Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREK+RVSTRTL+WKCVESR DSK +    F                                              GIQESVHEILMNLKEIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGT +ASICVKGPGCVTAQDI+LPPSVEI+DNTQHIA+LMEPI+LCI L+IERNRGYHI++PNN +D SYP+DA+FMPVRN NHSIHSY N NE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLF
        LEIWTNGSLTPKEALHEASRNLID    F
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLF

Arabidopsis top hits

e value

%identity

Alignment

ATCG00740.1 RNA polymerase subunit alpha

1.2e-72

61.14

Show/hide

Query:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL
        MVREK++VSTRTL+WKCVES+ DSK +    F                                              GIQESVHEILMNL EIVLRSNL
Subjt:  MVREKIRVSTRTLKWKCVESRADSKLIMDALFF---------------------------------------------GIQESVHEILMNLKEIVLRSNL

Query:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF
        YGTR+A ICV+GPG +TA+DIILPP+VEI+DNTQHIA L EPI+LCIELKIERNRGY ++  NN +D SYP+DA+FMPV N NHSIHSY NGNE QEILF
Subjt:  YGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNRGYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILF

Query:  LEIWTNGSLTPKEALHEASRNLIDFLFLF
        LEIWTNGSLTPKEALH+ASRNLI+    F
Subjt:  LEIWTNGSLTPKEALHEASRNLIDFLFLF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTCGAGAGAAAATAAGAGTATCGACTCGGACACTAAAGTGGAAGTGTGTTGAATCAAGAGCAGACAGTAAGCTTATTATGGACGCTTTATTCTTCGGTATTCAAGA
ATCGGTACATGAAATTTTAATGAATTTGAAAGAAATTGTATTGAGAAGTAATCTCTATGGAACTCGTGATGCGTCTATTTGTGTCAAGGGTCCTGGATGCGTAACTGCTC
AAGACATCATCTTACCACCTTCGGTGGAAATCGTTGATAATACACAGCATATAGCTAACCTAATGGAACCAATTAATTTGTGTATTGAATTAAAGATCGAGAGGAATCGC
GGATATCATATACAAACGCCAAATAATTTGAAAGACGCAAGTTATCCTATGGATGCTATATTCATGCCTGTTCGAAATGTTAATCATAGTATTCATTCTTATGTAAATGG
GAATGAAAACCAAGAGATACTTTTTCTCGAAATATGGACCAATGGAAGTTTAACTCCTAAAGAAGCACTTCATGAAGCCTCTCGGAATTTGATTGATTTTTTATTCCTTT
TTTACATGTGGAAGAAGAAAAAGAAAACTTCCATTTTTGAAATAATAATCAATTACTTTATAAAGAAAAAATTTCATTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MVREKIRVSTRTLKWKCVESRADSKLIMDALFFGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLMEPINLCIELKIERNR
GYHIQTPNNLKDASYPMDAIFMPVRNVNHSIHSYVNGNENQEILFLEIWTNGSLTPKEALHEASRNLIDFLFLFYMWKKKKKTSIFEIIINYFIKKKFH

PI0014130 (gene) of Melon (PI 482460) v1 genome