; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014140 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014140
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIB domain-containing protein
Genome locationchr11:448973..451247
RNA-Seq ExpressionPI0014140
SyntenyPI0014140
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593744.1 hypothetical protein SDJN03_13220, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4673.1Show/hide
Query:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK
        MASGL+NGT+ F+GCRTLLDS KSTTQAYSS  AVSPK ++K S A  S +K EAG +K     G ILK  QVSPALAGFLG SE SR EAVKQIWSYIK
Subjt:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK

Query:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS
        L NLQNP +KRQI CDEKLKAIFDGRE VG LEI K LS HFVKS
Subjt:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS

KAG6593745.1 hypothetical protein SDJN03_13221, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4774.48Show/hide
Query:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK
        MASGL+NGT+ F+GCRTLLDS KSTTQAYSS  AVSPK +LK S A  S +K EAG +K     G ILK  QVSPALAGFLG SE SRPEAVKQIWSYIK
Subjt:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK

Query:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS
        L NLQNP +KRQI CDEKLKAIFDGRE VG+LEI K LS HFVKS
Subjt:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS

XP_004154030.1 upstream activation factor subunit UAF30 isoform X1 [Cucumis sativus]1.3e-5178.08Show/hide
Query:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK
        MASGLSNGT+FFKGCRTLLDS KSTTQAYSSTP VS K  LKPS+A VSGQK +   +K     G +LK  +VSP LAGFLGQSEI+R EAVKQIW YIK
Subjt:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK

Query:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG
        L NLQNPTDKRQIICD KLKAIF GREKVGMLEI KFLSIHFVKSG
Subjt:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG

XP_008460088.1 PREDICTED: protein TRI1-like [Cucumis melo]5.4e-5075.34Show/hide
Query:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK
        MASGLSNGT+FF+GC+TLLDS K TTQAYSSTPAVS K KLKP SA VSGQK +A  ++     G I+K  +VSP LAGFLGQSEISR +A+KQIWSYIK
Subjt:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK

Query:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG
        L NLQN TDKRQI CD KLKAIF GREKVGMLEI+KFLS HFVKSG
Subjt:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG

XP_023514456.1 upstream activation factor subunit UAF30-like [Cucurbita pepo subsp. pepo]3.2e-4773.79Show/hide
Query:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK
        MASGL+NGT+ F+GCRTLLDS KSTTQAYSS  AVSPK KLK S A  S +  EAG +K     G I K  QVSPALAGFLG SE SRPEAVKQIWSYIK
Subjt:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK

Query:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS
        L NLQNP +KRQI CDEKLKAIFDGRE VG+LEI K LS HFVKS
Subjt:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS

TrEMBL top hitse value%identityAlignment
A0A0A0KCY9 SWIB domain-containing protein6.2e-5278.08Show/hide
Query:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK
        MASGLSNGT+FFKGCRTLLDS KSTTQAYSSTP VS K  LKPS+A VSGQK +   +K     G +LK  +VSP LAGFLGQSEI+R EAVKQIW YIK
Subjt:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK

Query:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG
        L NLQNPTDKRQIICD KLKAIF GREKVGMLEI KFLSIHFVKSG
Subjt:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG

A0A1S3CBA0 protein TRI1-like2.6e-5075.34Show/hide
Query:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK
        MASGLSNGT+FF+GC+TLLDS K TTQAYSSTPAVS K KLKP SA VSGQK +A  ++     G I+K  +VSP LAGFLGQSEISR +A+KQIWSYIK
Subjt:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK

Query:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG
        L NLQN TDKRQI CD KLKAIF GREKVGMLEI+KFLS HFVKSG
Subjt:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG

A0A5D3DMJ2 Protein TRI1-like2.6e-5075.34Show/hide
Query:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK
        MASGLSNGT+FF+GC+TLLDS K TTQAYSSTPAVS K KLKP SA VSGQK +A  ++     G I+K  +VSP LAGFLGQSEISR +A+KQIWSYIK
Subjt:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK

Query:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG
        L NLQN TDKRQI CD KLKAIF GREKVGMLEI+KFLS HFVKSG
Subjt:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKSG

A0A6J1KEZ2 upstream activation factor subunit spp27-like1.5e-4571.72Show/hide
Query:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK
        MASGL+NGT+ F+GCRTLLDS KSTTQAYSS  AVSPK +LK S A  + +K EAG +K     G I K  QVSPALAGFLG SE SR EAVKQIWSYIK
Subjt:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK

Query:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS
        L +LQNP +KRQI CDEKLKAIFDGRE VG+LEI K LS HFVKS
Subjt:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS

A0A6J1KHF5 upstream activation factor subunit spp27-like6.6e-4672.41Show/hide
Query:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK
        MASGL+NGT+ F+GCRTLLDS KSTTQAYSS  AVSPK +LK S A  S +K EAG +K     G I K  QVSPALAGFLG SE SR EAVKQIWSYIK
Subjt:  MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQK-----GSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIK

Query:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS
        L +LQNP +KRQI CDEKLKAIFDGRE VG+LEI K LS HFVKS
Subjt:  LKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp273.2e-1339.58Show/hide
Query:  RKLKPSSANVSGQKLEAGTQKGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLS
        RK K        +K         + KP ++SP LA FLG  ++SRP+ VK++W YIK  +LQ+P DKR I+CD+KLK++F+  + + M  + K+L+
Subjt:  RKLKPSSANVSGQKLEAGTQKGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLS

Q05024 Protein TRI18.7e-1140Show/hide
Query:  KRKLKPSSANVSGQKLEAGTQKGSI-LKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIH
        KRK K  S +   +K        SI ++   +S  L  FLG  E+ R + VK IW YIK  +LQNP D+R+I+CDEK++ IF   +K+ M  + K L+ H
Subjt:  KRKLKPSSANVSGQKLEAGTQKGSI-LKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIH

Q08747 Upstream activation factor subunit UAF301.5e-1033.33Show/hide
Query:  RTLLDSFK-STTQAYSSTPAVSPKRKLKPSSANVSGQK-LEAGTQKGSILK------PCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQ
        R+L D  K + T A   T  ++  ++      N S  K      +KG++ K         +S +LA  LG+ E++R E V+++W+YIK  NLQNP +K++
Subjt:  RTLLDSFK-STTQAYSSTPAVSPKRKLKPSSANVSGQK-LEAGTQKGSILK------PCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQ

Query:  IICDEKLKAIFDGREKVGMLEIAKFLSIHFVK
        I+CDEKL+ I    +   M E+ K L+ H  +
Subjt:  IICDEKLKAIFDGREKVGMLEIAKFLSIHFVK

Q9FMT4 SWI/SNF complex component SNF12 homolog5.4e-0535.71Show/hide
Query:  QVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIH
        ++S AL   LG    +RP  +  IW Y+K + LQNP D     CD  L+ +F G EK+    +++ +S H
Subjt:  QVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIH

Q9P7S3 SWI/SNF and RSC complexes subunit ssr31.2e-0441.51Show/hide
Query:  QVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFD
        ++S A A  LG  E +RP+ V  +W YIK   LQ+  +KR I CD+ L+ +F+
Subjt:  QVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFD

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein1.6e-2050.98Show/hide
Query:  RKLKPSSANVSGQKLEAGTQKGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFV
        R L   +A V    + AG  KG I K   VS  LA F G+ E++R  A+K++W Y+KL NLQNP +K++I CD+KLK IFDG++KVG+ EI K LS HF 
Subjt:  RKLKPSSANVSGQKLEAGTQKGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFV

Query:  KS
        KS
Subjt:  KS

AT2G14880.1 SWIB/MDM2 domain superfamily protein4.4e-1839.69Show/hide
Query:  TKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQ-KGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQ
        T  F+   T L S +     ++S PA   +     +SA  S +      +    I+KP  VSP +   +   EI+R +A+K+IW+YIK  +LQ+P +KR+
Subjt:  TKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQ-KGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQ

Query:  IICDEKLKAIFDGREKVGMLEIAKFLSIHFV
        I+CDEKLK IF+GR++VG LEIAK +  HF+
Subjt:  IICDEKLKAIFDGREKVGMLEIAKFLSIHFV

AT2G35605.1 SWIB/MDM2 domain superfamily protein1.6e-2354.9Show/hide
Query:  RKLKPSSANVSGQKLEAGTQKGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFV
        R L   +A+ +G K   G Q   ILK   VS  LA F+G++E+SR  AVK+IW YIKL NLQNP +KR+I+CDE+LK IF G++ VG LEI+K LS HF 
Subjt:  RKLKPSSANVSGQKLEAGTQKGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFV

Query:  KS
        KS
Subjt:  KS

AT3G03590.1 SWIB/MDM2 domain superfamily protein5.7e-2647.76Show/hide
Query:  FKGCRTLLDSFKSTTQAYSST-----PAVSPKRKLKPSSANVSGQKLEAGTQKGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKR
        F+G R+LL      T +  S      PA  PK K KP     S    +   +   I K   VSP LA FLG  E SR +A+K IW+YIK  +LQNP DKR
Subjt:  FKGCRTLLDSFKSTTQAYSST-----PAVSPKRKLKPSSANVSGQKLEAGTQKGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKR

Query:  QIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS
        +I CDE LK IF+G++KVG LEI+K LS HFVK+
Subjt:  QIICDEKLKAIFDGREKVGMLEIAKFLSIHFVKS

AT4G34290.1 SWIB/MDM2 domain superfamily protein1.2e-1854.55Show/hide
Query:  ILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFV
        I+KP  VS A+   +G  EI R +A+K+IW+YIK  +LQ+P +KR I+CDEKLK IF+G+E+VG LEIAK +  HF+
Subjt:  ILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIICDEKLKAIFDGREKVGMLEIAKFLSIHFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAGGTCTTAGCAATGGCACCAAGTTCTTCAAAGGCTGCAGAACTCTCTTAGATTCTTTCAAATCCACCACTCAAGCTTACTCTTCCACTCCTGCGGTCTCTCC
CAAGAGGAAGCTCAAACCCTCAAGTGCCAACGTTTCGGGCCAAAAATTGGAAGCCGGAACACAGAAAGGTTCGATTCTGAAGCCTTGCCAAGTTTCTCCGGCTCTCGCTG
GCTTCCTCGGCCAGTCCGAGATTTCGCGCCCTGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAAAAACCTCCAGAACCCAACTGATAAGAGGCAGATCATTTGT
GATGAAAAGCTGAAGGCTATATTTGATGGAAGAGAAAAAGTGGGAATGCTTGAGATTGCAAAATTTCTATCCATCCATTTTGTGAAATCTGGTTAA
mRNA sequenceShow/hide mRNA sequence
CTCGTTCTCCCTTTCTTCCAAGCTCCAACCTAAGTCGAGCGAAACCGGCAAAAACCCTAGCACTCACCGTCGTCTTTATCGGAGCAAAATGGCCTCAGGTCTTAGCAATG
GCACCAAGTTCTTCAAAGGCTGCAGAACTCTCTTAGATTCTTTCAAATCCACCACTCAAGCTTACTCTTCCACTCCTGCGGTCTCTCCCAAGAGGAAGCTCAAACCCTCA
AGTGCCAACGTTTCGGGCCAAAAATTGGAAGCCGGAACACAGAAAGGTTCGATTCTGAAGCCTTGCCAAGTTTCTCCGGCTCTCGCTGGCTTCCTCGGCCAGTCCGAGAT
TTCGCGCCCTGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAAAAACCTCCAGAACCCAACTGATAAGAGGCAGATCATTTGTGATGAAAAGCTGAAGGCTATAT
TTGATGGAAGAGAAAAAGTGGGAATGCTTGAGATTGCAAAATTTCTATCCATCCATTTTGTGAAATCTGGTTAACCTAAGCTTTCAGTGCAACTAATGCTTCTCTCTAAA
CCTCTCTTCCAAATCCTTAACGATGTTTTGTTATATTTTGTTTGGCCGATCCTAGGACATCGCCTTTACTTTTTGGTTTTACTCTGATTTAGGAAGAGTGGGCGTTTCTT
GTTCAGACATTGTTGACTATTAGTATTCTATAATTAATTAAGGTAGCTTTTCTGTCTTAATTAATTTTGGGGATGTATTGATCGTTGTGGACTTCAAATTGATATTTGTT
AAGGTAAATGCAATTTATTAGTAGGTTGAATGGTAATTCTAATTATTAAAGTGAACCTAGCTCAATGGTTTCATCACTACAATCGCTGAAAAGATGGTAAATGTAATTTA
ATGCTAAGTTGTAAGTGTAATTTAGTATATGAATACTTGAATTTTCAATCATGTGTATGATCTTGAAGAAAAATATGTTTCTAAATTGAAATTCAAAGTAGAGACTCGGA
AATTCAAATCTACACAATAA
Protein sequenceShow/hide protein sequence
MASGLSNGTKFFKGCRTLLDSFKSTTQAYSSTPAVSPKRKLKPSSANVSGQKLEAGTQKGSILKPCQVSPALAGFLGQSEISRPEAVKQIWSYIKLKNLQNPTDKRQIIC
DEKLKAIFDGREKVGMLEIAKFLSIHFVKSG