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PI0014165 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014165
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:16846445..16847544
RNA-Seq ExpressionPI0014165
SyntenyPI0014165
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031989.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.4e-0763.04Show/hide
Query:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS
        M I+EYEKRF ELAKYA+ F+ DE D CKRFE G++T+I+  VTA+
Subjt:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS

KAA0035974.1 hypothetical protein E6C27_scaffold56G001830 [Cucumis melo var. makuwa]4.8e-0831.13Show/hide
Query:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSV--------------------------TASQGVKRVE---------------------
        +++VEY+K+FTELAKYA+A I  E   C+RF  GL+  I+T V                          +AS G+   E                     
Subjt:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSV--------------------------TASQGVKRVE---------------------

Query:  GDTHELGEECGRRHIGACRHK-IVYFNCGQAGHYRDECQAKTKVDRNQRKQ
         D  +   ECG+RH G CR + I  F C +  HY+ E Q+K K D  +  Q
Subjt:  GDTHELGEECGRRHIGACRHK-IVYFNCGQAGHYRDECQAKTKVDRNQRKQ

KAA0045496.1 uncharacterized protein E6C27_scaffold1202G00410 [Cucumis melo var. makuwa]2.4e-0769.57Show/hide
Query:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS
        MT+ EYEK+FTELAKY I FI+DEE+  K FEGGL+  IQTSVT S
Subjt:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS

WP_217833235.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.1e-0765.22Show/hide
Query:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS
        MT+ EYEK+FTELAKYA+A I +E   CKRFE GL+++I+T VTAS
Subjt:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS

XP_024036987.1 uncharacterized protein LOC112096967 [Citrus clementina]2.4e-0738.46Show/hide
Query:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS---------QGVKRVEGDTHELGEECGRR---------HIGACR--HKIVYFNC
        M++ EYEK+F +L+++AI+ + DE + CKRFE GL+ +I+T+VTAS         +  KRVE   H + E  GRR         H G CR   ++ Y   
Subjt:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS---------QGVKRVEGDTHELGEECGRR---------HIGACR--HKIVYFNC

Query:  GQAGHYRDECQAKTKVD
        GQ GH R  C   ++ D
Subjt:  GQAGHYRDECQAKTKVD

TrEMBL top hitse value%identityAlignment
A0A5A7SGR7 Retrotrans_gag domain-containing protein1.5e-0766.67Show/hide
Query:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTA
        MTIVEYEKRFTELAKYA+A ++DE D  +RF+ GL+T I+ S+TA
Subjt:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTA

A0A5A7TTP8 Retrotrans_gag domain-containing protein1.1e-0769.57Show/hide
Query:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS
        MT+ EYEK+FTELAKY I FI+DEE+  K FEGGL+  IQTSVT S
Subjt:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS

A0A5A7V3F2 Zf-CCHC domain-containing protein1.5e-0763.04Show/hide
Query:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS
        MT+ EYEK FTELAKYA+AF+++E D CKRFE GL+T+I+  +T S
Subjt:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS

A0A5D3D2P1 Putative Retrotransposon protein1.1e-0763.04Show/hide
Query:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS
        M I+EYEKRF ELAKYA+ F+ DE D CKRFE G++T+I+  VTA+
Subjt:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTAS

A0A5D3E3Q3 Retrotrans_gag domain-containing protein2.3e-0831.13Show/hide
Query:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSV--------------------------TASQGVKRVE---------------------
        +++VEY+K+FTELAKYA+A I  E   C+RF  GL+  I+T V                          +AS G+   E                     
Subjt:  MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSV--------------------------TASQGVKRVE---------------------

Query:  GDTHELGEECGRRHIGACRHK-IVYFNCGQAGHYRDECQAKTKVDRNQRKQ
         D  +   ECG+RH G CR + I  F C +  HY+ E Q+K K D  +  Q
Subjt:  GDTHELGEECGRRHIGACRHK-IVYFNCGQAGHYRDECQAKTKVDRNQRKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATCGTAGAGTATGAGAAGAGGTTCACTGAACTAGCGAAGTACGCGATAGCCTTCATAATGGATGAGGAGGATAACTGTAAGCGTTTTGAAGGAGGTTTGAAGAC
AGATATTCAAACTTCAGTGACCGCGAGCCAAGGTGTGAAGCGTGTGGAAGGCGACACACATGAGCTTGGTGAAGAGTGTGGAAGGCGACACATAGGAGCTTGTAGACACA
AGATTGTTTATTTTAATTGTGGACAAGCTGGACATTACCGAGATGAATGTCAAGCAAAAACTAAAGTTGACAGGAACCAACGCAAACAAGAGTGGCATCCCATTCTGTTC
AGCAAGTTATGCGAGGAGGCTGTGAAAAATGCGAGGAAGAGTTTAGCTCTCCGAGATGATAAGGTTAGCATTTCAAAGGAAGTGTCTAATCCTGAGTTGACAACTAGCTA
CATGTTGAACTTTGGTTGGATGCATGGCTCAACAAGCAGTATGATGCCACGTGTAAAGTTGCAAGTAGGAGCTGGTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTATCGTAGAGTATGAGAAGAGGTTCACTGAACTAGCGAAGTACGCGATAGCCTTCATAATGGATGAGGAGGATAACTGTAAGCGTTTTGAAGGAGGTTTGAAGAC
AGATATTCAAACTTCAGTGACCGCGAGCCAAGGTGTGAAGCGTGTGGAAGGCGACACACATGAGCTTGGTGAAGAGTGTGGAAGGCGACACATAGGAGCTTGTAGACACA
AGATTGTTTATTTTAATTGTGGACAAGCTGGACATTACCGAGATGAATGTCAAGCAAAAACTAAAGTTGACAGGAACCAACGCAAACAAGAGTGGCATCCCATTCTGTTC
AGCAAGTTATGCGAGGAGGCTGTGAAAAATGCGAGGAAGAGTTTAGCTCTCCGAGATGATAAGGTTAGCATTTCAAAGGAAGTGTCTAATCCTGAGTTGACAACTAGCTA
CATGTTGAACTTTGGTTGGATGCATGGCTCAACAAGCAGTATGATGCCACGTGTAAAGTTGCAAGTAGGAGCTGGTGAGTGA
Protein sequenceShow/hide protein sequence
MTIVEYEKRFTELAKYAIAFIMDEEDNCKRFEGGLKTDIQTSVTASQGVKRVEGDTHELGEECGRRHIGACRHKIVYFNCGQAGHYRDECQAKTKVDRNQRKQEWHPILF
SKLCEEAVKNARKSLALRDDKVSISKEVSNPELTTSYMLNFGWMHGSTSSMMPRVKLQVGAGE