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PI0014186 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014186
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:12620286..12620765
RNA-Seq ExpressionPI0014186
SyntenyPI0014186
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]4.5e-2967.01Show/hide
Query:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGIS
        NN+N P  Q   E N AY+AHDLD+PI+SYA+PNLY+FNPGIAY  FGEN  FEIK +ML M QN GQF GHP EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.6e-3469.44Show/hide
Query:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEE
        NN+  P  QA    N  Y+A D DRPIRSYA+PNLY+FNPGIAYP F EN RFEIK VMLQ+IQN GQF  HP +DPH++IR+FYSICASFHMPGIS EE
Subjt:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEE

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.9e-2763.73Show/hide
Query:  MENNNRNAPP--PQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPG
        M +N  N  P       + N   IAH+LD PIR+Y + NLY+FN GIAY VFGENA FE+KPVMLQMIQ  GQFDG+ GEDPHEHI+SFYSICASFHM  
Subjt:  MENNNRNAPP--PQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]5.5e-3546.89Show/hide
Query:  MSDSEQP-FELDPKIERTFRGNRRRARQRQVRRMENNNRNA-----PPPQADPEPNA------------AYIAHDLDRPIRSYAAPNLYNFNPGIAYPVF
        MS+ + P F++DP+IERTFR   R+ +QR+  +    N +A       PQA    NA              +AHD +RP+R YA+PNLYNF PGI  P F
Subjt:  MSDSEQP-FELDPKIERTFRGNRRRARQRQVRRMENNNRNA-----PPPQADPEPNA------------AYIAHDLDRPIRSYAAPNLYNFNPGIAYPVF

Query:  GENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDG
          N RFE+KPVMLQM+Q  GQF G  GEDPH H++SF  IC++F M G+  + +R  LFP +LRDEA++WA + E G
Subjt:  GENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDG

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]1.4e-3348.43Show/hide
Query:  SEQPFELDPKIERTF--RGNRRRARQRQVRRMENNNRNAPPPQAD---PEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMI
        ++  FE +P+I+ TF  R ++ RA +R++   +NNN  AP        P  +  ++A D + PIR+YAAPNLY+F+PGI+ P+  ENARFEIKPVM+QMI
Subjt:  SEQPFELDPKIERTF--RGNRRRARQRQVRRMENNNRNAPPPQAD---PEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMI

Query:  QNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALE
        QN+ QF+    E+PH H+  F  +C++F +PGI+P  +R  LFP TLRD+AKRWA++LE
Subjt:  QNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALE

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein5.0e-2652.78Show/hide
Query:  NAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEA
        N   IAH+L+ PI  YA+P+LY FN GI YP FG NARF++KP ML MIQ   QF G+  EDP +HI+S Y +C+SFH+P +S E+L    F  TL+D+ 
Subjt:  NAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEA

Query:  KRWANALE
        K+W   LE
Subjt:  KRWANALE

A0A5A7UDN8 Uncharacterized protein2.2e-2967.01Show/hide
Query:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGIS
        NN+N P  Q   E N AY+AHDLD+PI+SYA+PNLY+FNPGIAY  FGEN  FEIK +ML M QN GQF GHP EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 17.7e-3569.44Show/hide
Query:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEE
        NN+  P  QA    N  Y+A D DRPIRSYA+PNLY+FNPGIAYP F EN RFEIK VMLQ+IQN GQF  HP +DPH++IR+FYSICASFHMPGIS EE
Subjt:  NNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEE

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 19.1e-2863.73Show/hide
Query:  MENNNRNAPP--PQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPG
        M +N  N  P       + N   IAH+LD PIR+Y + NLY+FN GIAY VFGENA FE+KPVMLQMIQ  GQFDG+ GEDPHEHI+SFYSICASFHM  
Subjt:  MENNNRNAPP--PQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

U5CUI2 Retrotrans_gag domain-containing protein7.5e-2250.47Show/hide
Query:  NAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEA
        N   +A D  R IR YAAP     NPGI  P   +  +FE+KPVM QM+Q +GQF G P EDPH H+RSF  +  SF + G+S E LR  LFP +LRD A
Subjt:  NAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEA

Query:  KRWANAL
        + W N L
Subjt:  KRWANAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACAGTGAACAACCATTCGAACTTGACCCTAAAATTGAGCGAACATTTCGGGGTAATCGGCGAAGAGCAAGGCAGAGACAAGTTCGTAGGATGGAAAATAACAA
CAGAAATGCCCCTCCGCCGCAAGCTGACCCAGAACCAAACGCCGCCTATATAGCACATGACTTGGATAGACCGATTAGATCTTATGCGGCGCCCAACCTCTATAACTTCA
ACCCAGGAATCGCCTACCCTGTATTTGGTGAGAACGCCAGGTTTGAAATTAAACCTGTTATGCTTCAAATGATTCAGAACATCGGACAATTCGACGGACATCCTGGGGAA
GACCCACACGAACATATACGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGA
TGAGGCGAAGAGGTGGGCGAATGCCCTAGAAGATGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACAGTGAACAACCATTCGAACTTGACCCTAAAATTGAGCGAACATTTCGGGGTAATCGGCGAAGAGCAAGGCAGAGACAAGTTCGTAGGATGGAAAATAACAA
CAGAAATGCCCCTCCGCCGCAAGCTGACCCAGAACCAAACGCCGCCTATATAGCACATGACTTGGATAGACCGATTAGATCTTATGCGGCGCCCAACCTCTATAACTTCA
ACCCAGGAATCGCCTACCCTGTATTTGGTGAGAACGCCAGGTTTGAAATTAAACCTGTTATGCTTCAAATGATTCAGAACATCGGACAATTCGACGGACATCCTGGGGAA
GACCCACACGAACATATACGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGA
TGAGGCGAAGAGGTGGGCGAATGCCCTAGAAGATGGCTAG
Protein sequenceShow/hide protein sequence
MSDSEQPFELDPKIERTFRGNRRRARQRQVRRMENNNRNAPPPQADPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNIGQFDGHPGE
DPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDG