; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014221 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014221
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranslation initiation factor IF-3
Genome locationchr05:4453192..4456518
RNA-Seq ExpressionPI0014221
SyntenyPI0014221
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]3.1e-14092.64Show/hide
Query:  MAGLSGSFPFKHLLSQSSAAATTTSAAA-----TSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPD
        MAGLSGSFPFK LLSQSSAAATTTS+++     TSSSSTTPFRTS PSLPISSSNSNAFKFRLHKSNSLRL+FS PVSSPIRTSVFARLGGAPRSSGPPD
Subjt:  MAGLSGSFPFKHLLSQSSAAATTTSAAA-----TSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRSNDE GLD+SAI+S NVRLIDA+QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV
        DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP++KDKPAVN VSA V
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]3.5e-14496.63Show/hide
Query:  MAGLSGSFPFKHLLSQSSAAATTTS--AAATSSSSTTPFRTSIPSLPISSS-NSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
        MAGLSGSFPFK LLSQSSAA+TTTS  AA TSSSSTTPFRTS PSLPISSS NSNAFK RLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
Subjt:  MAGLSGSFPFKHLLSQSSAAATTTS--AAATSSSSTTPFRTSIPSLPISSS-NSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK

Query:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV
        HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP++KDKPAVNEVSAGV
Subjt:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]2.7e-12887.21Show/hide
Query:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTT---PFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
        MAGL+  FPFK LLSQSS  ATT+SAAA+SSSS     PFRTSI  LP+SSS SNAF FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP DSK
Subjt:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTT---PFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK

Query:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+D+FGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV
        HDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP++KD PA+NEVSAGV
Subjt:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV

XP_023547209.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo]1.9e-11882.03Show/hide
Query:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSN
        MAGLSG FPFK + SQSSA AT T+   +SSSS TPFRTSI  LP+ SS SNAF+FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SKRS 
Subjt:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSN

Query:  DEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
        D   LDVS+IRSNNVRLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQHDY
Subjt:  DEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY

Query:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKP-AVNEVSAGV
        SVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPP++KDKP AVNEVSA V
Subjt:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKP-AVNEVSAGV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]2.1e-13691.19Show/hide
Query:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSN
        MAGLSG FPFK LLSQS+ A TT++AAATSSSS TPFRTSI  LP+SSS +NAFKFRL KSNSLRLV SFPVSSPIRTSVF+R GGAPRSSGP DSKRS+
Subjt:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSN

Query:  DEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
        DEFGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
Subjt:  DEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY

Query:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPREKDKPAVNEVSAGV
        SVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PP++KDKPAVNEVSAGV
Subjt:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPREKDKPAVNEVSAGV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-31.5e-14092.64Show/hide
Query:  MAGLSGSFPFKHLLSQSSAAATTTSAAA-----TSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPD
        MAGLSGSFPFK LLSQSSAAATTTS+++     TSSSSTTPFRTS PSLPISSSNSNAFKFRLHKSNSLRL+FS PVSSPIRTSVFARLGGAPRSSGPPD
Subjt:  MAGLSGSFPFKHLLSQSSAAATTTSAAA-----TSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPD

Query:  SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRSNDE GLD+SAI+S NVRLIDA+QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV
        DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP++KDKPAVN VSA V
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV

A0A1S3BV82 Translation initiation factor IF-31.7e-14496.63Show/hide
Query:  MAGLSGSFPFKHLLSQSSAAATTTS--AAATSSSSTTPFRTSIPSLPISSS-NSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
        MAGLSGSFPFK LLSQSSAA+TTTS  AA TSSSSTTPFRTS PSLPISSS NSNAFK RLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
Subjt:  MAGLSGSFPFKHLLSQSSAAATTTS--AAATSSSSTTPFRTSIPSLPISSS-NSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK

Query:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV
        HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP++KDKPAVNEVSAGV
Subjt:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV

A0A6J1DYM5 Translation initiation factor IF-31.3e-12887.21Show/hide
Query:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTT---PFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK
        MAGL+  FPFK LLSQSS  ATT+SAAA+SSSS     PFRTSI  LP+SSS SNAF FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP DSK
Subjt:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTT---PFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSK

Query:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
        RS+D+FGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ
Subjt:  RSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQ

Query:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV
        HDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP++KD PA+NEVSAGV
Subjt:  HDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV

A0A6J1G3Y5 Translation initiation factor IF-31.2e-11882.03Show/hide
Query:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSN
        MAGLSG FPFK + SQSSA AT T+   +SSSS TPFRTSI  LP+ SS SNAF+FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SKRS 
Subjt:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSN

Query:  DEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
        D   LDVS+IRSNNVRLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQHDY
Subjt:  DEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY

Query:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKP-AVNEVSAGV
        SVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPP++KDKP AVNEVSA V
Subjt:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKP-AVNEVSAGV

A0A6J1KDY9 Translation initiation factor IF-32.1e-11882.03Show/hide
Query:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSN
        MAGLSG FPFK + SQSSA AT T+   +SSSS TPFRTSI  LP  SS SNA +FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SKRS 
Subjt:  MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSN

Query:  DEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
        D   LDVS+IRSNNVRLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQHDY
Subjt:  DEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY

Query:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKP-AVNEVSAGV
        SVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPP++KDKP AVNEVSAGV
Subjt:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKP-AVNEVSAGV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-37.1e-3140.91Show/hide
Query:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        D +R+  +       IR   +R+ID+  + +G+++ A+A+++AE+ ELDLV++S  A PPV RIMDY KY++E +KK R  +KK      D+KE+KM Y 
Subjt:  DSKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  A++FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic1.5e-7359.64Show/hide
Query:  ATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSN
        A  TS+    ++  T    ++ S  + S +S     RL K+    L F+    SP R    T  F   GG  R SG     R  +   +  LD+S+IRS 
Subjt:  ATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSN

Query:  NVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKD
         VRLID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+D
Subjt:  NVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKD

Query:  GDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-REKDKPAVNEVSA
        GDKVKVIV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP R+K K A NE SA
Subjt:  GDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-REKDKPAVNEVSA

Q8R9C2 Translation initiation factor IF-31.2e-3043.48Show/hide
Query:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK
        IR   VRLID     +G++S  +A ++A++  LDLV + P+A+PPV ++MD+ KYRYEL K+++  +KK     +++KE++M  NI+ HD+ V+LK+A K
Subjt:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        FLKDGDKVKV +  +GRE    ++A +L++RF EE+ E    E+A +   RN+ +V+ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

Q8YNE3 Translation initiation factor IF-33.5e-3044.79Show/hide
Query:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK
        IR   +R+ID   + +G+++  +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY++E +KK R  +KK      D+KE+KM Y I++HDY+VR+K A++
Subjt:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEVGELATEEAKNFRDRNIFIVLVPNK
        FLKDGDKVK  V  +GRE +  ++A +L++R     E  GE+  ++A     RN+ +++ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ---EEVGELATEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic3.8e-7772.3Show/hide
Query:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+ 
Subjt:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
         TRMDLKELKMGYNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  REKDKPAVNEVSA
        ++K KPA ++VSA
Subjt:  REKDKPAVNEVSA

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein5.1e-0831.06Show/hide
Query:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA
        I  + VRL+  + +   VVS  +A++ A++ + DLV +  DA PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A
Subjt:  IRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAA

Query:  KKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLV
         K ++ G +VK + V  K +  E      +EL+ RF   +G+ A  E+    DR   +V+V
Subjt:  KKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLV

AT2G24060.1 Translation initiation factor 3 protein1.1e-7459.64Show/hide
Query:  ATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSN
        A  TS+    ++  T    ++ S  + S +S     RL K+    L F+    SP R    T  F   GG  R SG     R  +   +  LD+S+IRS 
Subjt:  ATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIR----TSVFARLGGAPRSSGPPDSKRSND---EFGLDVSAIRSN

Query:  NVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKD
         VRLID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+D
Subjt:  NVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKD

Query:  GDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-REKDKPAVNEVSA
        GDKVKVIV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP R+K K A NE SA
Subjt:  GDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-REKDKPAVNEVSA

AT4G30690.1 Translation initiation factor 3 protein2.7e-7872.3Show/hide
Query:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+KYRYE QK+K+ QQKK+ 
Subjt:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
         TRMDLKELKMGYNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  REKDKPAVNEVSA
        ++K KPA ++VSA
Subjt:  REKDKPAVNEVSA

AT4G30690.2 Translation initiation factor 3 protein2.7e-6261.5Show/hide
Query:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
        GG   S  P D     K S D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+                  
Subjt:  GGAPRSSGPPD----SKRSNDEFGLDVSAIRSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA

Query:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP
                    YNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PP
Subjt:  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PP

Query:  REKDKPAVNEVSA
        ++K KPA ++VSA
Subjt:  REKDKPAVNEVSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCTCCGGCAGTTTTCCTTTCAAGCATCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCTCCGCCGCCGCAACTTCTTCCTCTTCCACTACTCCCTT
CCGAACCTCAATTCCCTCTCTTCCCATCTCCTCGTCTAATTCCAATGCCTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCGTCTTCTCCTTTCCCGTTTCCT
CTCCAATTCGTACTTCTGTATTTGCTCGATTAGGCGGCGCTCCTCGATCTTCAGGACCGCCTGATTCTAAGCGCTCTAACGATGAATTTGGTCTCGATGTTTCCGCCATC
AGGTCAAATAATGTGAGGCTTATCGATGCTCAACAGAATATGGTTGGAGTTGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATT
ATCCCCTGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCA
TGGATTTGAAAGAGCTTAAAATGGGTTATAACATCGATCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAAGAAATTTTTGAAAGATGGAGACAAGGTTAAAGTTATA
GTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAG
AGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCTCAAGAACCTCCCAGAGAAAAAGATAAACCTGCAGTTAATGAAGTTTCTGCTGGTG
TTTAA
mRNA sequenceShow/hide mRNA sequence
AGATCTTCCAATTAAAAAAAGAAGAATACAGTTGAGTGATGAGTCCACTCCAAATTCAAACTATTGTGGATAAGATTTTTTCTTTTTTTCTTTTTTTCTTTCTTTTTCAA
ATTTTTCTTTTCCATTTTCTTAAAAATAATTTAAAAAATAAAAATAAAAAAATCCCCAAACTCCCACCCACCACTGCCCCCTTCCACAGCTCAAAGCTATGGCTGGGCTC
TCCGGCAGTTTTCCTTTCAAGCATCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCTCCGCCGCCGCAACTTCTTCCTCTTCCACTACTCCCTTCCGAACCTCAAT
TCCCTCTCTTCCCATCTCCTCGTCTAATTCCAATGCCTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCGTCTTCTCCTTTCCCGTTTCCTCTCCAATTCGTA
CTTCTGTATTTGCTCGATTAGGCGGCGCTCCTCGATCTTCAGGACCGCCTGATTCTAAGCGCTCTAACGATGAATTTGGTCTCGATGTTTCCGCCATCAGGTCAAATAAT
GTGAGGCTTATCGATGCTCAACAGAATATGGTTGGAGTTGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCCCCTGATGC
AGATCCTCCAGTTGTCAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAAG
AGCTTAAAATGGGTTATAACATCGATCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAAGAAATTTTTGAAAGATGGAGACAAGGTTAAAGTTATAGTGAACCTGAAA
GGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATAT
ATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCTCAAGAACCTCCCAGAGAAAAAGATAAACCTGCAGTTAATGAAGTTTCTGCTGGTGTTTAAGCTCAGG
AATCGTCAAGCTTTCGCCAAAAATAGATGGGTTAGTTGCAACATTCTAAATCTTCTTCTACCATAGAGAAATTTGAGAGATTAAATGTATAATGTTTTGTTTAATCTTTA
TGCATCAAACTGTTGTTCGTCCTATTTTTTTAGTGCAATGTTTAGAAATCAGATGTGTTACTAATTCTTTAGGAAACATCAATTCATATAAGCATCCTTTGCATTGACCA
Protein sequenceShow/hide protein sequence
MAGLSGSFPFKHLLSQSSAAATTTSAAATSSSSTTPFRTSIPSLPISSSNSNAFKFRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEFGLDVSAI
RSNNVRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVI
VNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPREKDKPAVNEVSAGV