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PI0014250 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014250
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pro-like protein
Genome locationchr06:21102480..21102968
RNA-Seq ExpressionPI0014250
SyntenyPI0014250
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]1.1e-3860Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS
        ME  VDEV+KPH+ K+EVMTTR+M  G +SLN+ ++  L+ + S+     LG          L++K+KKK LVK EM EFDP +K IP LYDTFKSA IS
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS

Query:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR
        YSS +S+ KD +LTKMESL +A VAQE SFEG+TVY CPPDFELNNWD VDLPT   FSR
Subjt:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR

KAA0036947.1 uncharacterized protein E6C27_scaffold86G00270 [Cucumis melo var. makuwa]4.1e-3859.38Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS
        ME  VDEV+KPH+ K+EVMTTR+M  G +SLN+ ++  L+ + S+     LG          L++++KKK L K EM EFDP +K IP LYDTFKSA IS
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS

Query:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR
        YSS +S+ KD +LTKMESL +AVVAQE SFEG+TVY CPPDFELNNWD VDLPT   FSR
Subjt:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]2.1e-3758.75Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS
        ME  VDEV+KPH+ K+EVMTTR+M  G +SLN+ ++  L+ + S+     LG          L++ +KKK L K EM EFDP +K IP LYDTFKSA IS
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS

Query:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR
        YSS +S+ KD +LTKMESL +A VAQE SFEG+TVY CPPDFELNNWD VDLPT   FSR
Subjt:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR

KAA0042240.1 Gag-pro-like protein [Cucumis melo var. makuwa]7.1e-3860.67Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMK-------GDLVWVISHPYMI--RLGLKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASISY
        ME  VDE++KPHR K+EVMTTR+M DG +SLN+ ++        D  + + +   I  ++ L++KRKKK L K EM EFDP LKFIPALYDTFKSA ISY
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMK-------GDLVWVISHPYMI--RLGLKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASISY

Query:  SSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVD
        SSHDS+ KD +LTK+ESLLI  +AQE SFEG+ VY CPP+FELN WDIVD
Subjt:  SSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVD

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]9.2e-3858.75Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS
        ME  VDEV+KPH+ K+EVMTTR+M  G +SLN+ ++  L+ + S+     LG          L++K+KKK L K EM EFDP +K IP LYD FKSA IS
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS

Query:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR
        YSSH+S+ KD +LTKM SL +A VAQE SFEG+TVY CPPDFELNNWD VDLPT   FSR
Subjt:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein5.3e-3960Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS
        ME  VDEV+KPH+ K+EVMTTR+M  G +SLN+ ++  L+ + S+     LG          L++K+KKK LVK EM EFDP +K IP LYDTFKSA IS
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS

Query:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR
        YSS +S+ KD +LTKMESL +A VAQE SFEG+TVY CPPDFELNNWD VDLPT   FSR
Subjt:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR

A0A5A7T5W2 Retrotrans_gag domain-containing protein2.0e-3859.38Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS
        ME  VDEV+KPH+ K+EVMTTR+M  G +SLN+ ++  L+ + S+     LG          L++++KKK L K EM EFDP +K IP LYDTFKSA IS
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS

Query:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR
        YSS +S+ KD +LTKMESL +AVVAQE SFEG+TVY CPPDFELNNWD VDLPT   FSR
Subjt:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein9.9e-3858.75Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS
        ME  VDEV+KPH+ K+EVMTTR+M  G +SLN+ ++  L+ + S+     LG          L++ +KKK L K EM EFDP +K IP LYDTFKSA IS
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS

Query:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR
        YSS +S+ KD +LTKMESL +A VAQE SFEG+TVY CPPDFELNNWD VDLPT   FSR
Subjt:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR

A0A5A7TFY1 Gag-pro-like protein3.4e-3860.67Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMK-------GDLVWVISHPYMI--RLGLKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASISY
        ME  VDE++KPHR K+EVMTTR+M DG +SLN+ ++        D  + + +   I  ++ L++KRKKK L K EM EFDP LKFIPALYDTFKSA ISY
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMK-------GDLVWVISHPYMI--RLGLKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASISY

Query:  SSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVD
        SSHDS+ KD +LTK+ESLLI  +AQE SFEG+ VY CPP+FELN WDIVD
Subjt:  SSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVD

A0A5D3DEB3 Retrotrans_gag domain-containing protein4.5e-3858.75Show/hide
Query:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS
        ME  VDEV+KPH+ K+EVMTTR+M  G +SLN+ ++  L+ + S+     LG          L++K+KKK L K EM EFDP +K IP LYD FKSA IS
Subjt:  MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLG----------LKKKRKKKCLVKKEM-EFDPGLKFIPALYDTFKSASIS

Query:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR
        YSSH+S+ KD +LTKM SL +A VAQE SFEG+TVY CPPDFELNNWD VDLPT   FSR
Subjt:  YSSHDSNSKDCMLTKMESLLIAVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGGCTGTAGATGAAGTGGTAAAGCCACACAGGCCTAAAATTGAAGTTATGACCACTAGGATGATGAAAGATGGAAGATTTTCTTTGAATCGAGCAATGAAGGG
AGATTTGGTTTGGGTTATAAGTCATCCGTATATGATAAGATTAGGCTTGAAGAAGAAAAGAAAAAAAAAGTGTTTGGTAAAGAAAGAGATGGAGTTTGATCCAGGTCTAA
AGTTTATACCCGCACTGTACGATACTTTCAAGAGTGCTAGTATAAGTTACTCATCACATGACTCTAATTCGAAAGATTGTATGTTAACGAAGATGGAGAGTTTATTGATT
GCAGTAGTGGCACAAGAAACATCATTTGAAGGCGACACAGTTTATACCTGTCCACCTGATTTTGAGCTTAACAATTGGGATATTGTAGATCTACCTACAAACTTTTTATT
TTCAAGAGTAATATCTACCTACATACTATGGCTCTACCCAAAGTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGGCTGTAGATGAAGTGGTAAAGCCACACAGGCCTAAAATTGAAGTTATGACCACTAGGATGATGAAAGATGGAAGATTTTCTTTGAATCGAGCAATGAAGGG
AGATTTGGTTTGGGTTATAAGTCATCCGTATATGATAAGATTAGGCTTGAAGAAGAAAAGAAAAAAAAAGTGTTTGGTAAAGAAAGAGATGGAGTTTGATCCAGGTCTAA
AGTTTATACCCGCACTGTACGATACTTTCAAGAGTGCTAGTATAAGTTACTCATCACATGACTCTAATTCGAAAGATTGTATGTTAACGAAGATGGAGAGTTTATTGATT
GCAGTAGTGGCACAAGAAACATCATTTGAAGGCGACACAGTTTATACCTGTCCACCTGATTTTGAGCTTAACAATTGGGATATTGTAGATCTACCTACAAACTTTTTATT
TTCAAGAGTAATATCTACCTACATACTATGGCTCTACCCAAAGTCATAG
Protein sequenceShow/hide protein sequence
MEEAVDEVVKPHRPKIEVMTTRMMKDGRFSLNRAMKGDLVWVISHPYMIRLGLKKKRKKKCLVKKEMEFDPGLKFIPALYDTFKSASISYSSHDSNSKDCMLTKMESLLI
AVVAQETSFEGDTVYTCPPDFELNNWDIVDLPTNFLFSRVISTYILWLYPKS