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PI0014271 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014271
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionsuccinate dehydrogenase assembly factor 1, mitochondrial
Genome locationchr09:21377126..21377817
RNA-Seq ExpressionPI0014271
SyntenyPI0014271
Gene Ontology termsGO:0034553 - mitochondrial respiratory chain complex II assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459591.1 PREDICTED: succinate dehydrogenase assembly factor 1, mitochondrial [Cucumis melo]5.7e-3491.95Show/hide
Query:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP
        MAKLSGLQKQVLSLYRAFLRAARTKSVEDR Q+E+IVA EFRRNAK+IDRKNFI+IEYLLRRGNKQLDQLKSPATVRLSTL+PNPEP
Subjt:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP

XP_011656085.1 succinate dehydrogenase assembly factor 1, mitochondrial [Cucumis sativus]1.5e-3493.1Show/hide
Query:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP
        MAKLSGLQKQVLSLYRAFLRAARTKSVEDR Q+E+IVATEFRRNAK+IDRKNFI+IEYLLRRGNKQLDQLKSPATVRLSTL+PNPEP
Subjt:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP

XP_022141880.1 succinate dehydrogenase assembly factor 1, mitochondrial [Momordica charantia]1.9e-2682.5Show/hide
Query:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLN
        KLSGLQKQVLSLYR FLRAAR+KS EDR Q+E++VA EFRRNA +ID KNFI+IEYLLRRGNKQLDQLKSPATVRLS++N
Subjt:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLN

XP_023525064.1 succinate dehydrogenase assembly factor 1, mitochondrial [Cucurbita pepo subsp. pepo]1.9e-2678.82Show/hide
Query:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP
        KLSG+Q+QVLSLYRAFLRAAR+KS EDR QIE++V+ EFRRNAK IDRKNFI+IEYLLRRGNKQLDQL+SPATV LS+L  N  P
Subjt:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP

XP_038890134.1 succinate dehydrogenase assembly factor 1, mitochondrial [Benincasa hispida]5.3e-3287.36Show/hide
Query:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP
        MAKLSGLQKQVLSLYRAFLRAAR+KS EDR QIE+IVA EFRRNAK+IDRKNFIHIEYLLRRGNKQLDQLKSP TVR ST+NP+ EP
Subjt:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP

TrEMBL top hitse value%identityAlignment
A0A0A0KST3 Uncharacterized protein7.2e-3593.1Show/hide
Query:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP
        MAKLSGLQKQVLSLYRAFLRAARTKSVEDR Q+E+IVATEFRRNAK+IDRKNFI+IEYLLRRGNKQLDQLKSPATVRLSTL+PNPEP
Subjt:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP

A0A1S3CAJ2 succinate dehydrogenase assembly factor 1, mitochondrial2.7e-3491.95Show/hide
Query:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP
        MAKLSGLQKQVLSLYRAFLRAARTKSVEDR Q+E+IVA EFRRNAK+IDRKNFI+IEYLLRRGNKQLDQLKSPATVRLSTL+PNPEP
Subjt:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP

A0A6J1CJC1 succinate dehydrogenase assembly factor 1, mitochondrial9.4e-2782.5Show/hide
Query:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLN
        KLSGLQKQVLSLYR FLRAAR+KS EDR Q+E++VA EFRRNA +ID KNFI+IEYLLRRGNKQLDQLKSPATVRLS++N
Subjt:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLN

A0A6J1EX50 LOW QUALITY PROTEIN: succinate dehydrogenase assembly factor 1, mitochondrial1.0e-2577.65Show/hide
Query:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP
        KLSG+QKQVLSLY AFLRAAR+KS EDR +IE++V+ EFRRNAK IDRK+FI+IEYLLRRGNKQLDQL+SPATV LSTL  N  P
Subjt:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP

A0A7N2LDJ5 Uncharacterized protein8.0e-2678.75Show/hide
Query:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLN
        KLSG+QKQVLSLYR FLRAAR+KS EDRH+IE+IV+ EFRRN+K++DRKNF++IEYLLRRG KQLDQLKSP TV LS+LN
Subjt:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLN

SwissProt top hitse value%identityAlignment
A6ZYX9 Succinate dehydrogenase assembly factor 1, mitochondrial4.0e-0643.66Show/hide
Query:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSP
        +LSGLQK+VL LYRA +R A TK  E++      +  EF +  + + RK+F  IE+LLR GNK++     P
Subjt:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSP

A8PU71 Succinate dehydrogenase assembly factor 1, mitochondrial4.0e-0648.61Show/hide
Query:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKS
        M++ S LQ+QVLSLYR  LRA R K        EA V  EFR++A  + R + + IEYL RRG +QL  L+S
Subjt:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKS

B0K036 Succinate dehydrogenase assembly factor 1, mitochondrial2.8e-0743.96Show/hide
Query:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTL----NPNPEP
        M++LS LQ+QVLSLYR  LRA R K        EA V  EFR++A  + R + + IEYL RRG +QL  L+S     + T      P  EP
Subjt:  MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTL----NPNPEP

Q3E785 Succinate dehydrogenase assembly factor 1, mitochondrial4.0e-0643.66Show/hide
Query:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSP
        +LSGLQK+VL LYRA +R A TK  E++      +  EF +  + + RK+F  IE+LLR GNK++     P
Subjt:  KLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSP

Q54HG5 Succinate dehydrogenase assembly factor 1A, mitochondrial8.0e-0738.75Show/hide
Query:  SGLQKQVLSLYRAFLRAARTKSVED-RHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNP
        SGLQK VLSLYR+FLR +  K +++    I   + T+FR  A  I +++   IE LL +G +QL+Q++ P     +   P
Subjt:  SGLQKQVLSLYRAFLRAARTKSVED-RHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNP

Arabidopsis top hitse value%identityAlignment
AT2G39725.1 LYR family of Fe/S cluster biogenesis protein3.5e-2672.5Show/hide
Query:  AKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTL
        +KLSG+QKQVLSLYR FLRAAR++ +EDR +IE IV+TEFR N+KE+DRKNF +IEYLLR G KQLDQLKSPA V LS++
Subjt:  AKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTL

AT2G39725.2 LYR family of Fe/S cluster biogenesis protein3.5e-2672.5Show/hide
Query:  AKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTL
        +KLSG+QKQVLSLYR FLRAAR++ +EDR +IE IV+TEFR N+KE+DRKNF +IEYLLR G KQLDQLKSPA V LS++
Subjt:  AKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGCTCTCAGGGTTGCAAAAGCAAGTGCTCAGTCTCTACAGAGCATTTCTCCGAGCAGCTCGTACCAAATCGGTTGAAGATCGACACCAAATCGAAGCGATTGT
CGCTACCGAGTTCCGCCGCAACGCCAAGGAAATCGATCGTAAAAATTTCATCCACATCGAGTACCTTCTTCGTCGAGGTAACAAACAGTTGGATCAACTTAAAAGTCCTG
CCACTGTTCGATTGTCTACGCTCAATCCCAATCCTGAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTCTTATTCATTTTACAAACCCTTTCTAATTTTCTATCAATCGCTCCATCCCACAGCCACACCCACGCCAATTCCGTCGTCCTTGATTTGTTTCTTCACCGTTGCCA
TTCTAATTGGACCTAATGATTTCAAATCCATGGGATAAAGAAGGTTATGATAGGTAGGGATTAGTATCGGAGAGGAAGCTACAATGGCGAAGCTCTCAGGGTTGCAAAAG
CAAGTGCTCAGTCTCTACAGAGCATTTCTCCGAGCAGCTCGTACCAAATCGGTTGAAGATCGACACCAAATCGAAGCGATTGTCGCTACCGAGTTCCGCCGCAACGCCAA
GGAAATCGATCGTAAAAATTTCATCCACATCGAGTACCTTCTTCGTCGAGGTAACAAACAGTTGGATCAACTTAAAAGTCCTGCCACTGTTCGATTGTCTACGCTCAATC
CCAATCCTGAGCCTTGAAATTGTATGTACATTTCTTCGATTATTGGCTATTGCTGTTCTTGGTAGGATCAATTCGATTTTGCTTTCTTTCTTTCCTCTTGTAGTTCAGAT
CCGCAATTTTCCTTTTGATGATTTTCTTGGTTCGTAAGCTTAAGGTATGAATGTAGTTTAGTGGGAAATGGTTGTAAATTGAGCAATCTTATGAACACCAATTTGGAAAA
TATTGGGCTACTCTGTCGATTTTATTCACAAA
Protein sequenceShow/hide protein sequence
MAKLSGLQKQVLSLYRAFLRAARTKSVEDRHQIEAIVATEFRRNAKEIDRKNFIHIEYLLRRGNKQLDQLKSPATVRLSTLNPNPEP