CuGenDBv2

Gene ID	PI0014279
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Protein FAR1-RELATED SEQUENCE 4-like
Genome location	chr08:3462380..3463323
RNA-Seq Expression	PI0014279
Synteny	PI0014279
Gene Ontology terms	GO:0005488 - binding (molecular function)
InterPro domains	IPR018289 - MULE transposase domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

5.0e-64

51.31

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Query:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         D KEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

5.0e-64

51.31

Show/hide

Query:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         D KEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]

1.3e-64

50.92

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Query:  LLNVGSSSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISD
        L ++ SSSS+ +D +++ +I         D KEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++
Subjt:  LLNVGSSSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISD

Query:  HDCSLNTTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDD
        H+CS+N  Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D 
Subjt:  HDCSLNTTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDD

Query:  SGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
         GHFK+CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  SGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]

3.2e-79

57.99

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Query:  LLNVGSSSSVSNDEVIREICYHGDFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWY------------MLRKYISDHDCSLN
        LL +GSSS  SND+VI+ + ++GD KEK + GSKE++ KCF +IA+  NF FRTT SN +S E  CLQEGC+WY            MLRKYISDH+C +N
Subjt:  LLNVGSSSSVSNDEVIREICYHGDFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWY------------MLRKYISDHDCSLN

Query:  TTQSFH----------------RFMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHF
        TTQS H                RF+STD S P+ IV+KART LGV+IS+QKAWR KEHI++ L GD  +SYSLI  FF +L E  P T TAL++D++GHF
Subjt:  TTQSFH----------------RFMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHF

Query:  KFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        K CFM  GASI+GW+ Y  P ISVDGTFLK KFGG LL+ S+ D NN IFPLAFAIV SEND SW WFF
Subjt:  KFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]

2.2e-67

54.3

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Query:  EVIREICYHGDFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWY------------MLRKYISDHDCSLNTTQSFH-------
        +VI +I    D KEK +  SKE++SKCF  IA+K NF F+T  SN RS+EF C+Q+GC+WY            MLRK+I  HDCS+N  Q+ H       
Subjt:  EVIREICYHGDFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWY------------MLRKYISDHDCSLNTTQSFH-------

Query:  ---------RFMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFGASIDG
                 R  S+D   PK IV+K R  LGV+IS+ KAWRAKEHI+K LKGD  ESY+LI  F  KL E  P T TA E D  GHFK+C+MA G+SI+G
Subjt:  ---------RFMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFGASIDG

Query:  WKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        WK +CRP I VDGTFLKCK+ G LLT S+ D NN+ FPLAF+IV SENDASW WFF
Subjt:  WKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like

2.4e-64

51.31

Show/hide

Query:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         D KEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

A0A5A7UZ18 Protein FAR1-RELATED SEQUENCE 4-like

5.4e-64

50.94

Show/hide

Query:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         D KEK +  +KE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

A0A5A7VG38 Protein FAR1-RELATED SEQUENCE 4-like

9.2e-64

50.94

Show/hide

Query:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         D KE  +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like

2.4e-64

51.31

Show/hide

Query:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         D KEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

A0A5D3DJR8 MuDR family transposase

6.4e-65

50.92

Show/hide

Query:  LLNVGSSSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISD
        L ++ SSSS+ +D +++ +I         D KEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++
Subjt:  LLNVGSSSSVSND-EVIREICYHG-----DFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISD

Query:  HDCSLNTTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDD
        H+CS+N  Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D 
Subjt:  HDCSLNTTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDD

Query:  SGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
         GHFK+CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  SGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49920.1 MuDR family transposase

1.4e-08

35.29

Show/hide

Query:  AKEHIIKILKGDVVESYSLIASFFDKLVE----CIPATCTALEMD-DSGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQI
        AK   IK   GD  +S+ LI      L       +     +L  D +   F+  F AF  SI G++ +CRP+I VD   L  K+   L+  S+ D  NQ 
Subjt:  AKEHIIKILKGDVVESYSLIASFFDKLVE----CIPATCTALEMD-DSGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQI

Query:  FPLAFAIVYSENDASWTWF
        FPLAFA+    +  SW WF
Subjt:  FPLAFAIVYSENDASWTWF

AT1G64260.1 MuDR family transposase

1.3e-12

26.64

Show/hide

Query:  IAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLNTTQSFHRFMSTDRSFPKAIVHKARTNLGVSISHQKAW------
        I  + N   R T   + + E  C++  CKW +            + KY   H CS      F    + D      I    R    +SI+  K W      
Subjt:  IAMKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLNTTQSFHRFMSTDRSFPKAIVHKARTNLGVSISHQKAW------

Query:  ---------RAKEHIIKILKGDVVESY----SLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTV
                   K  +IK + GD  +S+     LI++F       +          D   F+  F +F  SI+G++ +CRP+I VD   L  K+   L+  
Subjt:  ---------RAKEHIIKILKGDVVESY----SLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTV

Query:  SSQDVNNQIFPLAFAIVYSENDASWTWFF
        S  D  N+ FPLAFA+    +  SW WFF
Subjt:  SSQDVNNQIFPLAFAIVYSENDASWTWFF

Sequences

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CDS sequence

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ATGTTGTTAAATGTAGGTTCTTCTTCTTCTGTTTCAAATGACGAAGTTATAAGAGAGATTTGTTATCATGGTGATTTCAAGGAAAAAAGTTTATCTGGAAGTAAAGAAGT
TGTTTCAAAGTGTTTTTGCATAATAGCAATGAAGAATAACTTTCCATTTAGAACTACAGTATCAAATTTGAGGTCTCTTGAATTCATATGTTTGCAAGAAGGGTGCAAAT
GGTATATGCTACGAAAGTACATTTCTGACCATGACTGTTCACTGAATACTACCCAAAGTTTTCACAGGTTCATGTCTACTGATCGTTCCTTTCCAAAAGCGATTGTCCAT
AAGGCTCGTACAAATCTTGGAGTTAGTATAAGTCATCAAAAAGCTTGGAGGGCAAAAGAACACATAATAAAGATATTAAAAGGTGATGTCGTTGAATCGTATTCGTTGAT
TGCAAGCTTTTTTGATAAATTGGTTGAGTGTATCCCAGCTACATGCACTGCTTTAGAGATGGATGATAGTGGTCATTTCAAGTTTTGCTTTATGGCTTTTGGTGCATCAA
TTGATGGGTGGAAATATTATTGTAGACCTATCATTTCTGTTGATGGCACGTTTTTGAAGTGTAAGTTTGGTGGCATCCTATTAACAGTCTCATCACAAGATGTGAACAAT
CAAATTTTTCCTCTTGCTTTTGCTATTGTATATTCTGAAAATGATGCATCATGGACATGGTTTTTTTAG

mRNA sequence

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Protein sequence

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MLLNVGSSSSVSNDEVIREICYHGDFKEKSLSGSKEVVSKCFCIIAMKNNFPFRTTVSNLRSLEFICLQEGCKWYMLRKYISDHDCSLNTTQSFHRFMSTDRSFPKAIVH
KARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNN
QIFPLAFAIVYSENDASWTWFF

PI0014279 (gene) of Melon (PI 482460) v1 genome