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PI0014307 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014307
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr02:12562583..12563128
RNA-Seq ExpressionPI0014307
SyntenyPI0014307
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]3.0e-0536.28Show/hide
Query:  LCD--TELED-FKESQDATLAP-KSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANPQPHAAEENDDEEFFKYINETVAKPMTNGFEEVFQT
        +CD  T +ED  K  +D +L P  S      ++ VDD   +    T   A ET  P PPK+T+     A E +D +E+FK+I     KPM +GFE++FQ 
Subjt:  LCD--TELED-FKESQDATLAP-KSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANPQPHAAEENDDEEFFKYINETVAKPMTNGFEEVFQT

Query:  QVNLKELAAKHEK
        Q N +E   + +K
Subjt:  QVNLKELAAKHEK

KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]1.4e-0734.93Show/hide
Query:  MQDLCDTELEDF--------KESQDATLA-PKSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANP------QPHAA--EENDDEEFFKYINE
        +QDL    L D         KES++ TL           ++ +DD   +  Q    +A +TR P PPKQ+  P      Q  A   +++DDE +FK+INE
Subjt:  MQDLCDTELEDF--------KESQDATLA-PKSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANP------QPHAA--EENDDEEFFKYINE

Query:  TVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK
         V++P+  GFE+VFQ Q NL+E   +++K + DLE K D+    H+
Subjt:  TVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]2.0e-1254.32Show/hide
Query:  GETRAPLPPKQTANPQPHAAEENDDEE-FFKYINETVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK
        GET APLP KQ  N Q +AA E+D+E+ +FK+I +T  KP+ +GF++VFQ QV+L+E   +HEKQI DLE K+DN +Q H+
Subjt:  GETRAPLPPKQTANPQPHAAEENDDEE-FFKYINETVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK

TYK23271.1 hypothetical protein E5676_scaffold142G003250 [Cucumis melo var. makuwa]5.5e-0743.48Show/hide
Query:  QENQTTVVEAGETRAPLPPKQTANP------QPHAAEENDDEE--FFKYINETVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDN
        +E +TT   A +T  P  PKQT  P      Q  AA ++ D++  FFK+I++ V KP+ +GF++VFQ Q NL+E+  +H+KQ   LE KVDN
Subjt:  QENQTTVVEAGETRAPLPPKQTANP------QPHAAEENDDEE--FFKYINETVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDN

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]1.4e-0734.93Show/hide
Query:  MQDLCDTELEDF--------KESQDATLA-PKSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANP------QPHAA--EENDDEEFFKYINE
        +QDL    L D         KES++ TL           ++ +DD   +  Q    +A +TR P PPKQ+  P      Q  A   +++DDE +FK+INE
Subjt:  MQDLCDTELEDF--------KESQDATLA-PKSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANP------QPHAA--EENDDEEFFKYINE

Query:  TVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK
         V++P+  GFE+VFQ Q NL+E   +++K + DLE K D+    H+
Subjt:  TVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein1.5e-0536.28Show/hide
Query:  LCD--TELED-FKESQDATLAP-KSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANPQPHAAEENDDEEFFKYINETVAKPMTNGFEEVFQT
        +CD  T +ED  K  +D +L P  S      ++ VDD   +    T   A ET  P PPK+T+     A E +D +E+FK+I     KPM +GFE++FQ 
Subjt:  LCD--TELED-FKESQDATLAP-KSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANPQPHAAEENDDEEFFKYINETVAKPMTNGFEEVFQT

Query:  QVNLKELAAKHEK
        Q N +E   + +K
Subjt:  QVNLKELAAKHEK

A0A5A7TJU0 Uncharacterized protein7.0e-0834.93Show/hide
Query:  MQDLCDTELEDF--------KESQDATLA-PKSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANP------QPHAA--EENDDEEFFKYINE
        +QDL    L D         KES++ TL           ++ +DD   +  Q    +A +TR P PPKQ+  P      Q  A   +++DDE +FK+INE
Subjt:  MQDLCDTELEDF--------KESQDATLA-PKSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANP------QPHAA--EENDDEEFFKYINE

Query:  TVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK
         V++P+  GFE+VFQ Q NL+E   +++K + DLE K D+    H+
Subjt:  TVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK

A0A5A7U0L9 Uncharacterized protein9.5e-1354.32Show/hide
Query:  GETRAPLPPKQTANPQPHAAEENDDEE-FFKYINETVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK
        GET APLP KQ  N Q +AA E+D+E+ +FK+I +T  KP+ +GF++VFQ QV+L+E   +HEKQI DLE K+DN +Q H+
Subjt:  GETRAPLPPKQTANPQPHAAEENDDEE-FFKYINETVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK

A0A5D3DHY1 Uncharacterized protein2.7e-0743.48Show/hide
Query:  QENQTTVVEAGETRAPLPPKQTANP------QPHAAEENDDEE--FFKYINETVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDN
        +E +TT   A +T  P  PKQT  P      Q  AA ++ D++  FFK+I++ V KP+ +GF++VFQ Q NL+E+  +H+KQ   LE KVDN
Subjt:  QENQTTVVEAGETRAPLPPKQTANP------QPHAAEENDDEE--FFKYINETVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDN

A0A5D3E1H0 Uncharacterized protein7.0e-0834.93Show/hide
Query:  MQDLCDTELEDF--------KESQDATLA-PKSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANP------QPHAA--EENDDEEFFKYINE
        +QDL    L D         KES++ TL           ++ +DD   +  Q    +A +TR P PPKQ+  P      Q  A   +++DDE +FK+INE
Subjt:  MQDLCDTELEDF--------KESQDATLA-PKSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANP------QPHAA--EENDDEEFFKYINE

Query:  TVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK
         V++P+  GFE+VFQ Q NL+E   +++K + DLE K D+    H+
Subjt:  TVAKPMTNGFEEVFQTQVNLKELAAKHEKQILDLEKKVDNYHQSHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCTCTGCGATACTGAACTCGAAGATTTCAAAGAGTCTCAAGACGCGACGTTGGCACCTAAGTCGCAAACCACGCTCTTCCGTGATGAGCCGGTTGATGACGC
AACTCCACAAGAAAATCAAACAACTGTTGTGGAAGCTGGTGAGACGCGGGCTCCTTTGCCGCCTAAGCAAACTGCAAATCCACAACCCCACGCAGCGGAAGAAAATGACG
ATGAGGAATTCTTTAAGTACATTAATGAGACTGTCGCCAAGCCAATGACGAATGGATTTGAAGAAGTCTTCCAAACCCAAGTCAATCTGAAAGAACTTGCGGCGAAACAT
GAGAAACAGATCTTGGACTTGGAAAAAAAAGTGGACAACTACCATCAATCACATAAAGATCAGCTTGCATCTGAAGTAGCGAGTCTGAAGGAGCAAAACAAGGCGATGGT
GGGTTTGAAAACCTCGTGCCTAAGCCTGCCATTTCGCCTGTGTTTGAAAACCCCTTTTCTGATGATGAAGAGGACACCACGACTGGACCTTCTGACGCAGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCTCTGCGATACTGAACTCGAAGATTTCAAAGAGTCTCAAGACGCGACGTTGGCACCTAAGTCGCAAACCACGCTCTTCCGTGATGAGCCGGTTGATGACGC
AACTCCACAAGAAAATCAAACAACTGTTGTGGAAGCTGGTGAGACGCGGGCTCCTTTGCCGCCTAAGCAAACTGCAAATCCACAACCCCACGCAGCGGAAGAAAATGACG
ATGAGGAATTCTTTAAGTACATTAATGAGACTGTCGCCAAGCCAATGACGAATGGATTTGAAGAAGTCTTCCAAACCCAAGTCAATCTGAAAGAACTTGCGGCGAAACAT
GAGAAACAGATCTTGGACTTGGAAAAAAAAGTGGACAACTACCATCAATCACATAAAGATCAGCTTGCATCTGAAGTAGCGAGTCTGAAGGAGCAAAACAAGGCGATGGT
GGGTTTGAAAACCTCGTGCCTAAGCCTGCCATTTCGCCTGTGTTTGAAAACCCCTTTTCTGATGATGAAGAGGACACCACGACTGGACCTTCTGACGCAGCTATAA
Protein sequenceShow/hide protein sequence
MQDLCDTELEDFKESQDATLAPKSQTTLFRDEPVDDATPQENQTTVVEAGETRAPLPPKQTANPQPHAAEENDDEEFFKYINETVAKPMTNGFEEVFQTQVNLKELAAKH
EKQILDLEKKVDNYHQSHKDQLASEVASLKEQNKAMVGLKTSCLSLPFRLCLKTPFLMMKRTPRLDLLTQL