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PI0014318 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014318
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:15738641..15741275
RNA-Seq ExpressionPI0014318
SyntenyPI0014318
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032577.1 uncharacterized protein E6C27_scaffold43053G00400 [Cucumis melo var. makuwa]2.3e-1550Show/hide
Query:  LGEEERVKKIKGDKVVKNKNVPNNDVESMRR----DEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPSARQWL
        L +   + K+    V+   N   + V+++++    DEQ  EASTQA SSNPL PPPF + L KKG DQQF+KF D+LKQ +INIPFVD L+KMPS  ++L
Subjt:  LGEEERVKKIKGDKVVKNKNVPNNDVESMRR----DEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPSARQWL

KAA0039667.1 uncharacterized protein E6C27_scaffold744G001580 [Cucumis melo var. makuwa]6.2e-2171.62Show/hide
Query:  VKNKNVPNNDVESMRRDEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKM
        ++N NVPN +VES R+DEQC +ASTQATSS  LPPPPFP  L KKG DQQF+K  D+LKQL+INIPFVDALK+M
Subjt:  VKNKNVPNNDVESMRRDEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKM

KAA0043257.1 hypothetical protein E6C27_scaffold110G001440 [Cucumis melo var. makuwa]1.4e-2049.64Show/hide
Query:  LDEMRCVACGSPHNTDACPLNTETVTFVRNDPYSTPTTLIGRTTITLGEEERVKKIKGDKVVKNKNVPNNDVESMRRDEQCCEASTQATSSNPLPPPPFP
        ++EM CV CGSPHN DA PLNTE V +  ND                             V KNK     +V+S RRDEQ  EAS QATS NP+ PP F 
Subjt:  LDEMRCVACGSPHNTDACPLNTETVTFVRNDPYSTPTTLIGRTTITLGEEERVKKIKGDKVVKNKNVPNNDVESMRRDEQCCEASTQATSSNPLPPPPFP

Query:  NHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPS
        +H  KKG  +QF KF DVLKQL+INI FVDAL+ MPS
Subjt:  NHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPS

KAA0054400.1 hypothetical protein E6C27_scaffold24G001460 [Cucumis melo var. makuwa]1.7e-2650.31Show/hide
Query:  AISQVNTVGSSIQVVNKLDEMRCVACGSPHNTDACPLNTETVTFVRNDPYSTPTTLIGRTTITLGEEERVKKIKGDKVVKNKNVPNNDVESMRRDEQCCE
        A++QVN   +SIQ V K+ ++ CV CG    TDACPLNT+T       P ST TT        L   E VK  K      N NV N +VES RR+E   E
Subjt:  AISQVNTVGSSIQVVNKLDEMRCVACGSPHNTDACPLNTETVTFVRNDPYSTPTTLIGRTTITLGEEERVKKIKGDKVVKNKNVPNNDVESMRRDEQCCE

Query:  ASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPSARQWL
         S QA  SNPLPP  +P+ L KK  DQQF KF DVLKQLH  IPFVDAL+K+PS  ++L
Subjt:  ASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPSARQWL

KAA0067858.1 uncharacterized protein E6C27_scaffold2484G00710 [Cucumis melo var. makuwa]3.3e-1462.12Show/hide
Query:  NDVESMRRDEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKM
        + +ES  RDEQC +AS + TSSNPLPPPPFP+ L KKG D+ F+K  +VLKQ+HINI F+DAL++M
Subjt:  NDVESMRRDEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKM

TrEMBL top hitse value%identityAlignment
A0A5A7VJ95 Uncharacterized protein1.6e-1462.12Show/hide
Query:  NDVESMRRDEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKM
        + +ES  RDEQC +AS + TSSNPLPPPPFP+ L KKG D+ F+K  +VLKQ+HINI F+DAL++M
Subjt:  NDVESMRRDEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKM

A0A5D3BAB3 Uncharacterized protein3.0e-2171.62Show/hide
Query:  VKNKNVPNNDVESMRRDEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKM
        ++N NVPN +VES R+DEQC +ASTQATSS  LPPPPFP  L KKG DQQF+K  D+LKQL+INIPFVDALK+M
Subjt:  VKNKNVPNNDVESMRRDEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKM

A0A5D3BCH3 Uncharacterized protein8.2e-2750.31Show/hide
Query:  AISQVNTVGSSIQVVNKLDEMRCVACGSPHNTDACPLNTETVTFVRNDPYSTPTTLIGRTTITLGEEERVKKIKGDKVVKNKNVPNNDVESMRRDEQCCE
        A++QVN   +SIQ V K+ ++ CV CG    TDACPLNT+T       P ST TT        L   E VK  K      N NV N +VES RR+E   E
Subjt:  AISQVNTVGSSIQVVNKLDEMRCVACGSPHNTDACPLNTETVTFVRNDPYSTPTTLIGRTTITLGEEERVKKIKGDKVVKNKNVPNNDVESMRRDEQCCE

Query:  ASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPSARQWL
         S QA  SNPLPP  +P+ L KK  DQQF KF DVLKQLH  IPFVDAL+K+PS  ++L
Subjt:  ASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPSARQWL

A0A5D3DBN7 Uncharacterized protein1.1e-1550Show/hide
Query:  LGEEERVKKIKGDKVVKNKNVPNNDVESMRR----DEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPSARQWL
        L +   + K+    V+   N   + V+++++    DEQ  EASTQA SSNPL PPPF + L KKG DQQF+KF D+LKQ +INIPFVD L+KMPS  ++L
Subjt:  LGEEERVKKIKGDKVVKNKNVPNNDVESMRR----DEQCCEASTQATSSNPLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPSARQWL

A0A5D3E113 Uncharacterized protein6.7e-2149.64Show/hide
Query:  LDEMRCVACGSPHNTDACPLNTETVTFVRNDPYSTPTTLIGRTTITLGEEERVKKIKGDKVVKNKNVPNNDVESMRRDEQCCEASTQATSSNPLPPPPFP
        ++EM CV CGSPHN DA PLNTE V +  ND                             V KNK     +V+S RRDEQ  EAS QATS NP+ PP F 
Subjt:  LDEMRCVACGSPHNTDACPLNTETVTFVRNDPYSTPTTLIGRTTITLGEEERVKKIKGDKVVKNKNVPNNDVESMRRDEQCCEASTQATSSNPLPPPPFP

Query:  NHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPS
        +H  KKG  +QF KF DVLKQL+INI FVDAL+ MPS
Subjt:  NHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTTCGCAAGTTAACACTGTAGGAAGCTCTATTCAAGTGGTCAACAAACTAGATGAAATGAGATGTGTGGCATGTGGTAGTCCTCACAACACCGACGCATGCCC
ACTGAATACAGAGACAGTCACATTCGTTAGAAATGACCCGTACTCCACACCTACAACCCTGATTGGAAGAACCACCATAACTTTGGGTGAGGAGGAACGAGTCAAGAAAA
TCAAGGGCGACAAGGTGGTCAAGAATAAAAACGTACCAAACAATGACGTGGAGAGCATGAGGCGAGATGAACAATGCTGCGAAGCGTCTACTCAAGCGACAAGCTCGAAT
CCTTTACCGCCTCCTCCATTTCCTAATCACCTAAACAAGAAAGGCAAGGATCAACAATTTCACAAGTTTTTTGACGTTTTGAAGCAGCTTCACATCAACATCCCGTTTGT
TGATGCGTTAAAGAAAATGCCTTCTGCGAGACAGTGGCTCTATTACAGGCAACAAACGACGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTTCGCAAGTTAACACTGTAGGAAGCTCTATTCAAGTGGTCAACAAACTAGATGAAATGAGATGTGTGGCATGTGGTAGTCCTCACAACACCGACGCATGCCC
ACTGAATACAGAGACAGTCACATTCGTTAGAAATGACCCGTACTCCACACCTACAACCCTGATTGGAAGAACCACCATAACTTTGGGTGAGGAGGAACGAGTCAAGAAAA
TCAAGGGCGACAAGGTGGTCAAGAATAAAAACGTACCAAACAATGACGTGGAGAGCATGAGGCGAGATGAACAATGCTGCGAAGCGTCTACTCAAGCGACAAGCTCGAAT
CCTTTACCGCCTCCTCCATTTCCTAATCACCTAAACAAGAAAGGCAAGGATCAACAATTTCACAAGTTTTTTGACGTTTTGAAGCAGCTTCACATCAACATCCCGTTTGT
TGATGCGTTAAAGAAAATGCCTTCTGCGAGACAGTGGCTCTATTACAGGCAACAAACGACGTCTTAA
Protein sequenceShow/hide protein sequence
MAISQVNTVGSSIQVVNKLDEMRCVACGSPHNTDACPLNTETVTFVRNDPYSTPTTLIGRTTITLGEEERVKKIKGDKVVKNKNVPNNDVESMRRDEQCCEASTQATSSN
PLPPPPFPNHLNKKGKDQQFHKFFDVLKQLHINIPFVDALKKMPSARQWLYYRQQTTS