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PI0014374 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014374
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr02:20016090..20016554
RNA-Seq ExpressionPI0014374
SyntenyPI0014374
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.8e-3655.56Show/hide
Query:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------
        MLNMTTLLTSFV G  +KV KCGVCGLVGHPNDKCP++IE  N++RKYDPH NTYN+GWRDNPNLRW NDNQ+ +Q  S+S+NQ                
Subjt:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------

Query:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK
                            +GKGKL AQ ++ANVSA+SLRSGKIL T   K+
Subjt:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.8e-3656.86Show/hide
Query:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------
        MLNMTTLLTSFV G   KV KCGVCGLVGHPNDKC  +IE  N++R+YDPHSNTYN+GWRDNPNLRW NDNQ+ +Q  S+S+NQ                
Subjt:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------

Query:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK
                            +GKGKL AQPD+ANVSAISLRSGKIL T   K+
Subjt:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK

KAA0062012.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.7e-3655.56Show/hide
Query:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------
        MLNMTTLLTSFV G  +KV KCGVCGLVGHPNDKCP++IE  N++R+YDPH NTYN+ WRDNPNLRW NDNQ+ +Q  S+S+NQ                
Subjt:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------

Query:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK
                            +GKGKLLAQP+H NVSAI LRSGKIL T   K+
Subjt:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.3e-3657.52Show/hide
Query:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------
        MLNMTTLLTSFV G   KV KCGVCGLVGHPNDKCP +IE  N++R+YDPHSNTYN+GWRDN NLRW NDNQ+ +Q  S+S+NQ                
Subjt:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------

Query:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK
                            +GKGKL AQPDHANVSAISLRSGKIL T   K+
Subjt:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK

XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]4.8e-3655.56Show/hide
Query:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------
        MLNMTTLLTSFV G ++KV KCGVCGLVG+PNDKCP +IE  N++R+YDPH NTYN GWRDNPNLRW NDNQ+ +Q   +S+NQ                
Subjt:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------

Query:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK
                            +GKGKL AQPDH NVSAISLRSGKIL T   K+
Subjt:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK

TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032912.3e-3655.56Show/hide
Query:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------
        MLNMTTLLTSFV G ++KV KCGVCGLVG+PNDKCP +IE  N++R+YDPH NTYN GWRDNPNLRW NDNQ+ +Q   +S+NQ                
Subjt:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------

Query:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK
                            +GKGKL AQPDH NVSAISLRSGKIL T   K+
Subjt:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK

A0A5A7V0Q7 Retrotransposon gag protein2.3e-3656.86Show/hide
Query:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------
        MLNMTTLLTSFV G   KV KCGVCGLVGHPNDKC  +IE  N++R+YDPHSNTYN+GWRDNPNLRW NDNQ+ +Q  S+S+NQ                
Subjt:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------

Query:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK
                            +GKGKL AQPD+ANVSAISLRSGKIL T   K+
Subjt:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK

A0A5A7V1C6 Retrotransposon gag protein1.8e-3655.56Show/hide
Query:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------
        MLNMTTLLTSFV G  +KV KCGVCGLVGHPNDKCP++IE  N++R+YDPH NTYN+ WRDNPNLRW NDNQ+ +Q  S+S+NQ                
Subjt:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------

Query:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK
                            +GKGKLLAQP+H NVSAI LRSGKIL T   K+
Subjt:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK

A0A5D3CB46 Retrotransposon gag protein6.1e-3757.52Show/hide
Query:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------
        MLNMTTLLTSFV G   KV KCGVCGLVGHPNDKCP +IE  N++R+YDPHSNTYN+GWRDN NLRW NDNQ+ +Q  S+S+NQ                
Subjt:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------

Query:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK
                            +GKGKL AQPDHANVSAISLRSGKIL T   K+
Subjt:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK

A0A5D3CRR8 Retrotransposon gag protein1.4e-3655.56Show/hide
Query:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------
        MLNMTTLLTSFV G  +KV KCGVCGLVGHPNDKCP++IE  N++RKYDPH NTYN+GWRDNPNLRW NDNQ+ +Q  S+S+NQ                
Subjt:  MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQ----------------

Query:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK
                            +GKGKL AQ ++ANVSA+SLRSGKIL T   K+
Subjt:  --------------------EGKGKLLAQPDHANVSAISLRSGKILKTLQMKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCATGGTGGCTCTGTTAAAGTTGTTAAGTGCGGGGTGTGTGGTCTAGTCGGACATCCTAATGATAAGTGCCCAGA
TCTAATTGAAAAGGCAAATGTCATTCGTAAGTACGATCCCCATAGCAATACTTACAATGCCGGTTGGAGAGACAACCCTAATCTAAGGTGGAGAAACGACAACCAAAGAC
CTTCACAACCAACTTCCTCTTCAAACAATCAAGAAGGTAAAGGCAAACTTCTGGCTCAGCCAGATCATGCTAATGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTG
AAAACCCTCCAAATGAAGAAAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCATGGTGGCTCTGTTAAAGTTGTTAAGTGCGGGGTGTGTGGTCTAGTCGGACATCCTAATGATAAGTGCCCAGA
TCTAATTGAAAAGGCAAATGTCATTCGTAAGTACGATCCCCATAGCAATACTTACAATGCCGGTTGGAGAGACAACCCTAATCTAAGGTGGAGAAACGACAACCAAAGAC
CTTCACAACCAACTTCCTCTTCAAACAATCAAGAAGGTAAAGGCAAACTTCTGGCTCAGCCAGATCATGCTAATGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTG
AAAACCCTCCAAATGAAGAAAATGTAA
Protein sequenceShow/hide protein sequence
MLNMTTLLTSFVHGGSVKVVKCGVCGLVGHPNDKCPDLIEKANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQPTSSSNNQEGKGKLLAQPDHANVSAISLRSGKIL
KTLQMKKM