; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014401 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014401
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:9275061..9275903
RNA-Seq ExpressionPI0014401
SyntenyPI0014401
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062964.1 retrotransposon protein [Cucumis melo var. makuwa]3.2e-7759.6Show/hide
Query:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC
        M++S RAP+H+WT+EEE  LV+ L+ELVS+ GWKSDN TF P YLAQL RM+AEK+PGC ++ ++ I  RIK +K+TF  IAEM   +CSGFGWNDE KC
Subjt:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC

Query:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG
        I+AEKELFDNWV+S+PAVKGLLNKPF +YD+L YVFG D AT   AETFA+VGSN P GG++ F    GN+ + P++Y+QG+D+S DD+  SRP R+ EG
Subjt:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG

Query:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP--NLQRQDEV
        RTGSSG K KRG Q    +E I   +D TN+QL+ IA+WP  NL   + V
Subjt:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP--NLQRQDEV

KAA0067583.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-7760.83Show/hide
Query:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC
        M++S RAP+H+WT+EEE  +V+ L+ELVS+ GWKSDN TF P YLAQL RM+AEK+PGC ++ ++ I  RIK +K+TF  IAEM   +CSGFGWNDE KC
Subjt:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC

Query:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG
        I+AEKELFDNWV+S+PA K LLNKPFS+YD+L YVFG+D AT   AETFA+VGSN P GG++ F    GN+ + P +Y+QG+D+S DD+  SRP R+ EG
Subjt:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG

Query:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP
        RTGSSG K KRG Q    VE I  V+D TN+QL+ IA+WP
Subjt:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]6.4e-7858.43Show/hide
Query:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSS-TIRIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCI
        MASS R PKH WTKEEE+ LV+ LVELV+  GW+SDN TF P YL QL RM+A K+PGCNI  S+   RIK MK+ FH +AEM   +CSGFGWNDE KCI
Subjt:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSS-TIRIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCI

Query:  IAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEGRT
        + EKELFD+WVKS+PA KGLLNK F HYD+L YVFGKD AT  RAE+FA++GSN P G++   AD   DT+ P MY+ GL+MSPDD+  +R  R  E R 
Subjt:  IAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEGRT

Query:  GSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQ
         SSG K KR G A  + +I++  +++ N+QL  IA+WP LQRQD    R E+V Q
Subjt:  GSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQ

TYK20986.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-7759.6Show/hide
Query:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC
        M++S RAP+H+WTKEEE  LV+ L+ELVS+ GWKSDN TF P YLAQL R++AEK+PGC ++ ++ I  RIK +K+TF  IAEM   +CSGFGWNDE KC
Subjt:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC

Query:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG
        I+AEKELFDNWV+S+PA KGLLNKPFS+YD+L YVFG+D AT   AETFA+VGSN P GG++ F    GN+  +P +Y+QG+D+S DD+  SRP R+ EG
Subjt:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG

Query:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP--NLQRQDEV
        RTGSSG K KRG Q    +E I   +D TN+QL+ IA+WP  NL   + V
Subjt:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP--NLQRQDEV

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]4.0e-8061.09Show/hide
Query:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC
        MAS  RAPKH WTKEEE   V+ LVELVS  GW+SDN TF P YLAQLQRM+AEK+PG NIQ SSTI   +K++KKT+H IAEM   SCSGFGWN+E +C
Subjt:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC

Query:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFF-ADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG
        IIAE++LFD+W+KS+PA KGLL+K F +YDDL YVFGKD AT AR+ETF NVGSNV   F         +D +IPTMY+QG+ MSPD+M G R G++ E 
Subjt:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFF-ADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG

Query:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQ
        R  SS  K KRG +  +TVE+I++VM+F N+QLKAIA WP  +R  EV  R +VV Q
Subjt:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQ

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859532.0e-8061.09Show/hide
Query:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC
        MAS  RAPKH WTKEEE   V+ LVELVS  GW+SDN TF P YLAQLQRM+AEK+PG NIQ SSTI   +K++KKT+H IAEM   SCSGFGWN+E +C
Subjt:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC

Query:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFF-ADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG
        IIAE++LFD+W+KS+PA KGLL+K F +YDDL YVFGKD AT AR+ETF NVGSNV   F         +D +IPTMY+QG+ MSPD+M G R G++ E 
Subjt:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFF-ADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG

Query:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQ
        R  SS  K KRG +  +TVE+I++VM+F N+QLKAIA WP  +R  EV  R +VV Q
Subjt:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQ

A0A5A7U0H7 Retrotransposon protein2.0e-8061.09Show/hide
Query:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC
        MAS  RAPKH WTKEEE   V+ LVELVS  GW+SDN TF P YLAQLQRM+AEK+PG NIQ SSTI   +K++KKT+H IAEM   SCSGFGWN+E +C
Subjt:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC

Query:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFF-ADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG
        IIAE++LFD+W+KS+PA KGLL+K F +YDDL YVFGKD AT AR+ETF NVGSNV   F         +D +IPTMY+QG+ MSPD+M G R G++ E 
Subjt:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFF-ADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG

Query:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQ
        R  SS  K KRG +  +TVE+I++VM+F N+QLKAIA WP  +R  EV  R +VV Q
Subjt:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQ

A0A5A7VHM3 Retrotransposon protein1.2e-7760.83Show/hide
Query:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC
        M++S RAP+H+WT+EEE  +V+ L+ELVS+ GWKSDN TF P YLAQL RM+AEK+PGC ++ ++ I  RIK +K+TF  IAEM   +CSGFGWNDE KC
Subjt:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC

Query:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG
        I+AEKELFDNWV+S+PA K LLNKPFS+YD+L YVFG+D AT   AETFA+VGSN P GG++ F    GN+ + P +Y+QG+D+S DD+  SRP R+ EG
Subjt:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG

Query:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP
        RTGSSG K KRG Q    VE I  V+D TN+QL+ IA+WP
Subjt:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP

A0A5D3C1M0 Retrotransposon protein3.1e-7858.43Show/hide
Query:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSS-TIRIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCI
        MASS R PKH WTKEEE+ LV+ LVELV+  GW+SDN TF P YL QL RM+A K+PGCNI  S+   RIK MK+ FH +AEM   +CSGFGWNDE KCI
Subjt:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSS-TIRIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCI

Query:  IAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEGRT
        + EKELFD+WVKS+PA KGLLNK F HYD+L YVFGKD AT  RAE+FA++GSN P G++   AD   DT+ P MY+ GL+MSPDD+  +R  R  E R 
Subjt:  IAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEGRT

Query:  GSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQ
         SSG K KR G A  + +I++  +++ N+QL  IA+WP LQRQD    R E+V Q
Subjt:  GSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQ

A0A5D3DBP2 Retrotransposon protein1.2e-7759.6Show/hide
Query:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC
        M++S RAP+H+WTKEEE  LV+ L+ELVS+ GWKSDN TF P YLAQL R++AEK+PGC ++ ++ I  RIK +K+TF  IAEM   +CSGFGWNDE KC
Subjt:  MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTI--RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKC

Query:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG
        I+AEKELFDNWV+S+PA KGLLNKPFS+YD+L YVFG+D AT   AETFA+VGSN P GG++ F    GN+  +P +Y+QG+D+S DD+  SRP R+ EG
Subjt:  IIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVP-GGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEG

Query:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP--NLQRQDEV
        RTGSSG K KRG Q    +E I   +D TN+QL+ IA+WP  NL   + V
Subjt:  RTGSSGWKWKRGGQAAQTVEIIQNVMDFTNDQLKAIAKWP--NLQRQDEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02210.1 unknown protein7.0e-0626.47Show/hide
Query:  RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFG
        R K++++ F+ I  + RS   GF W++E + + A+  ++ +++K++   +  + +P  +Y DLC + G
Subjt:  RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFG

AT4G02210.2 unknown protein7.0e-0626.47Show/hide
Query:  RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFG
        R K++++ F+ I  + RS   GF W++E + + A+  ++ +++K++   +  + +P  +Y DLC + G
Subjt:  RIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWVKSYPAVKGLLNKPFSHYDDLCYVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCCTTTCGAGCCCCCAAACACATCTGGACGAAGGAGGAAGAGTCGTACCTGGTCAAGGTCTTGGTGGAGTTGGTATCCGTCCGCGGCTGGAAGTCAGACAA
TAGTACCTTCTGTCCTAGGTACCTGGCTCAGCTACAGAGAATGCTGGCGGAGAAGATGCCTGGATGTAATATCCAAGGTTCGTCGACAATTCGGATAAAAAACATGAAGA
AAACATTCCATGTCATTGCAGAAATGCACAGGTCATCGTGTAGTGGGTTCGGTTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAAAGAGTTGTTCGACAATTGGGTT
AAGAGTTATCCTGCTGTGAAGGGCCTCCTAAACAAGCCATTTTCCCATTATGACGACCTGTGCTATGTATTTGGGAAGGATTGTGCGACGAGAGCTCGCGCAGAGACATT
CGCCAATGTTGGGTCGAATGTGCCTGGAGGGTTCGAGGGATTTTTCGCTGATTATGGAAACGATACGGAGATCCCTACGATGTACAATCAGGGACTAGACATGTCGCCCG
ATGACATGGCGGGCTCACGTCCCGGTCGCTCGATGGAGGGTAGGACTGGTTCAAGCGGATGGAAGTGGAAGCGAGGAGGCCAGGCAGCACAGACTGTGGAGATCATTCAA
AATGTGATGGACTTCACCAACGACCAGTTGAAGGCCATTGCAAAGTGGCCGAATTTACAACGTCAAGATGAAGTCACCGCTCGTGACGAAGTTGTTAACCAGCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCCTTTCGAGCCCCCAAACACATCTGGACGAAGGAGGAAGAGTCGTACCTGGTCAAGGTCTTGGTGGAGTTGGTATCCGTCCGCGGCTGGAAGTCAGACAA
TAGTACCTTCTGTCCTAGGTACCTGGCTCAGCTACAGAGAATGCTGGCGGAGAAGATGCCTGGATGTAATATCCAAGGTTCGTCGACAATTCGGATAAAAAACATGAAGA
AAACATTCCATGTCATTGCAGAAATGCACAGGTCATCGTGTAGTGGGTTCGGTTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAAAGAGTTGTTCGACAATTGGGTT
AAGAGTTATCCTGCTGTGAAGGGCCTCCTAAACAAGCCATTTTCCCATTATGACGACCTGTGCTATGTATTTGGGAAGGATTGTGCGACGAGAGCTCGCGCAGAGACATT
CGCCAATGTTGGGTCGAATGTGCCTGGAGGGTTCGAGGGATTTTTCGCTGATTATGGAAACGATACGGAGATCCCTACGATGTACAATCAGGGACTAGACATGTCGCCCG
ATGACATGGCGGGCTCACGTCCCGGTCGCTCGATGGAGGGTAGGACTGGTTCAAGCGGATGGAAGTGGAAGCGAGGAGGCCAGGCAGCACAGACTGTGGAGATCATTCAA
AATGTGATGGACTTCACCAACGACCAGTTGAAGGCCATTGCAAAGTGGCCGAATTTACAACGTCAAGATGAAGTCACCGCTCGTGACGAAGTTGTTAACCAGCGGTAG
Protein sequenceShow/hide protein sequence
MASSFRAPKHIWTKEEESYLVKVLVELVSVRGWKSDNSTFCPRYLAQLQRMLAEKMPGCNIQGSSTIRIKNMKKTFHVIAEMHRSSCSGFGWNDEVKCIIAEKELFDNWV
KSYPAVKGLLNKPFSHYDDLCYVFGKDCATRARAETFANVGSNVPGGFEGFFADYGNDTEIPTMYNQGLDMSPDDMAGSRPGRSMEGRTGSSGWKWKRGGQAAQTVEIIQ
NVMDFTNDQLKAIAKWPNLQRQDEVTARDEVVNQR