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PI0014422 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014422
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr09:13417428..13417796
RNA-Seq ExpressionPI0014422
SyntenyPI0014422
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025734.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.7e-3458.2Show/hide
Query:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS
        M+ I+EG S +R P+LD  NY+Y K  M+  +K++  K W++++  +EPP VT+D ++VLKPE+ W DVE Q  +GN RA+NAI+NGVD NVFKLIN+C+
Subjt:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS

Query:  SAKEAWKILEVAYEGTSKVKTS
        + KEAWKILEVAYEGTSKVK S
Subjt:  SAKEAWKILEVAYEGTSKVKTS

KAA0032368.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.8e-3872.13Show/hide
Query:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS
        M+ IKEGGS  R P+LD  NYAY KA M AFLKSI NKTWK+VI+SWEPP++TI   +  K E  W D E Q  LGN RALNAIYN  DQNVFKLINTC+
Subjt:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS

Query:  SAKEAWKILEVAYEGTSKVKTS
        SAKEAWKILEVAYEGTSKVKTS
Subjt:  SAKEAWKILEVAYEGTSKVKTS

KAA0032462.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.3e-3357.38Show/hide
Query:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS
        M+ I+EG S +RSP+LD  NY+Y K  M+ F+K++  K W++++  +EPP VT++G++V KPE+ W D E Q  +GN RA+NAI+N VD N FKLIN+C+
Subjt:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS

Query:  SAKEAWKILEVAYEGTSKVKTS
        +AKEAWKILEVAYEGTSKVK S
Subjt:  SAKEAWKILEVAYEGTSKVKTS

KAA0033522.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.1e-3456.56Show/hide
Query:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS
        M+ I+EG S +R P+LD  NY+Y K  M+ F++++  + W++++  ++PP +T++G++V KPE+ W D E Q F+GN RALNAI+NGVD NVFKLIN+CS
Subjt:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS

Query:  SAKEAWKILEVAYEGTSKVKTS
        +AKEAWK LEVAYEGTSKVK S
Subjt:  SAKEAWKILEVAYEGTSKVKTS

KAA0035672.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.0e-3357.14Show/hide
Query:  IKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCSSAK
        I+EG S +R  +L+D NY+YSK  M+ F+K++  K W+ ++  +EPP VT+DG++V KP++ W D E Q  +GN+RA+N I+NGVD NVFKLIN+C++AK
Subjt:  IKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCSSAK

Query:  EAWKILEVAYEGTSKVKTS
        EAWKILEVAYEGTSK K S
Subjt:  EAWKILEVAYEGTSKVKTS

TrEMBL top hitse value%identityAlignment
A0A5A7SJ95 Gag-pol polyprotein2.3e-3458.2Show/hide
Query:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS
        M+ I+EG S +R P+LD  NY+Y K  M+  +K++  K W++++  +EPP VT+D ++VLKPE+ W DVE Q  +GN RA+NAI+NGVD NVFKLIN+C+
Subjt:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS

Query:  SAKEAWKILEVAYEGTSKVKTS
        + KEAWKILEVAYEGTSKVK S
Subjt:  SAKEAWKILEVAYEGTSKVKTS

A0A5A7SP99 Gag-pol polyprotein8.8e-3972.13Show/hide
Query:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS
        M+ IKEGGS  R P+LD  NYAY KA M AFLKSI NKTWK+VI+SWEPP++TI   +  K E  W D E Q  LGN RALNAIYN  DQNVFKLINTC+
Subjt:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS

Query:  SAKEAWKILEVAYEGTSKVKTS
        SAKEAWKILEVAYEGTSKVKTS
Subjt:  SAKEAWKILEVAYEGTSKVKTS

A0A5A7SWM0 Gag-pol polyprotein1.5e-3357.14Show/hide
Query:  IKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCSSAK
        I+EG S +R  +L+D NY+YSK  M+ F+K++  K W+ ++  +EPP VT+DG++V KP++ W D E Q  +GN+RA+N I+NGVD NVFKLIN+C++AK
Subjt:  IKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCSSAK

Query:  EAWKILEVAYEGTSKVKTS
        EAWKILEVAYEGTSK K S
Subjt:  EAWKILEVAYEGTSKVKTS

A0A5D3B9V9 Gag-pol polyprotein1.0e-3456.56Show/hide
Query:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS
        M+ I+EG S +R P+LD  NY+Y K  M+ F++++  + W++++  ++PP +T++G++V KPE+ W D E Q F+GN RALNAI+NGVD NVFKLIN+CS
Subjt:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS

Query:  SAKEAWKILEVAYEGTSKVKTS
        +AKEAWK LEVAYEGTSKVK S
Subjt:  SAKEAWKILEVAYEGTSKVKTS

A0A5D3D1H0 Gag-proteinase polyprotein1.1e-3357.38Show/hide
Query:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS
        M+ I+EG S +RSP+LD  NY+Y K  M+ F+K++  K W++++  +EPP VT++G++V KPE+ W D E Q  +GN RA+NAI+N VD N FKLIN+C+
Subjt:  MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCS

Query:  SAKEAWKILEVAYEGTSKVKTS
        +AKEAWKILEVAYEGTSKVK S
Subjt:  SAKEAWKILEVAYEGTSKVKTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGCATTAAGGAAGGAGGATCAATAGCACGATCACCTATTCTTGATGACTCTAACTATGCATATTCGAAGGCTTCTATGATGGCCTTTCTCAAATCAATTGTTAA
TAAAACTTGGAAATCTGTTATCACTAGTTGGGAACCTCCCTCTGTCACTATTGATGGTATAACCGTACTTAAACCAGAGATAAAATGGAACGATGTTGAATATCAAGATT
TTCTTGGTAATTTACGAGCTCTAAATGCAATTTACAATGGAGTTGATCAAAATGTGTTTAAATTAATAAACACTTGTTCTTCTGCTAAAGAAGCTTGGAAAATCCTTGAA
GTTGCTTATGAGGGAACTTCTAAAGTAAAAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGCATTAAGGAAGGAGGATCAATAGCACGATCACCTATTCTTGATGACTCTAACTATGCATATTCGAAGGCTTCTATGATGGCCTTTCTCAAATCAATTGTTAA
TAAAACTTGGAAATCTGTTATCACTAGTTGGGAACCTCCCTCTGTCACTATTGATGGTATAACCGTACTTAAACCAGAGATAAAATGGAACGATGTTGAATATCAAGATT
TTCTTGGTAATTTACGAGCTCTAAATGCAATTTACAATGGAGTTGATCAAAATGTGTTTAAATTAATAAACACTTGTTCTTCTGCTAAAGAAGCTTGGAAAATCCTTGAA
GTTGCTTATGAGGGAACTTCTAAAGTAAAAACTTCATGA
Protein sequenceShow/hide protein sequence
MDGIKEGGSIARSPILDDSNYAYSKASMMAFLKSIVNKTWKSVITSWEPPSVTIDGITVLKPEIKWNDVEYQDFLGNLRALNAIYNGVDQNVFKLINTCSSAKEAWKILE
VAYEGTSKVKTS