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PI0014449 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014449
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr11:18919830..18921090
RNA-Seq ExpressionPI0014449
SyntenyPI0014449
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037886.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]2.9e-0959.38Show/hide
Query:  SESNGFKRFEKGLQREICTPEIAIAMWTDFSQLVEIALRVEKKLGEEKSKVKPSQVVPLADGFR
        SES+ ++RFE+GL+ EI TP  AIA WT+FSQLV+IALRVE+ + EEKS V+ S+    A GFR
Subjt:  SESNGFKRFEKGLQREICTPEIAIAMWTDFSQLVEIALRVEKKLGEEKSKVKPSQVVPLADGFR

KAA0062777.1 Peptidase A1 [Cucumis melo var. makuwa]8.2e-1264.52Show/hide
Query:  VGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGF
        +GEE PEKTL+ELYEP+VH RPIG+VI    TNFHLRS+LISNL IFR S  E+P      F
Subjt:  VGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGF

KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus]1.9e-1363.24Show/hide
Query:  EPPLEPILENPLNNTVGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRE
        E PLEP LEN LN+ +GEE PEKTL++LYEP++HQRPIG+VIPPT TNFHLR      LP  + S+R+
Subjt:  EPPLEPILENPLNNTVGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRE

KAE8652898.1 hypothetical protein Csa_022680 [Cucumis sativus]1.4e-1968.83Show/hide
Query:  EPPLEPILENPLNNTVGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGF
        E PLEP  EN LNN +GEE PEKTL+ELYEP+VHQRPIG VIPPT TNFHLRS+LI NLPI R S  E+P      F
Subjt:  EPPLEPILENPLNNTVGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGF

TYJ97684.1 integrase [Cucumis melo var. makuwa]1.7e-1765.33Show/hide
Query:  PLEPILENPLNNTVGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGF
        P E  LEN LNN + EE PE+TL+ELYE ++HQRPI +VIPPT TNFHLRS+LISNLPIFRRS  E+P      F
Subjt:  PLEPILENPLNNTVGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGF

TrEMBL top hitse value%identityAlignment
A0A5A7TQW1 Gag protease polyprotein-like protein5.3e-0959.38Show/hide
Query:  SESNGFKRFEKGLQREICTPEIAIAMWTDFSQLVEIALRVEKKLGEEKSKVKPSQVVPLADGFR
        SESN  +RFE+GL+ EI TP  AIA WT+FSQLVE ALRVE+ + +EKS V+ S+    A GFR
Subjt:  SESNGFKRFEKGLQREICTPEIAIAMWTDFSQLVEIALRVEKKLGEEKSKVKPSQVVPLADGFR

A0A5A7V727 Peptidase A14.0e-1264.52Show/hide
Query:  VGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGF
        +GEE PEKTL+ELYEP+VH RPIG+VI    TNFHLRS+LISNL IFR S  E+P      F
Subjt:  VGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGF

A0A5D3BDU3 Gag protease polyprotein-like protein1.4e-0959.38Show/hide
Query:  SESNGFKRFEKGLQREICTPEIAIAMWTDFSQLVEIALRVEKKLGEEKSKVKPSQVVPLADGFR
        SES+ ++RFE+GL+ EI TP  AIA WT+FSQLV+IALRVE+ + EEKS V+ S+    A GFR
Subjt:  SESNGFKRFEKGLQREICTPEIAIAMWTDFSQLVEIALRVEKKLGEEKSKVKPSQVVPLADGFR

A0A5D3BF34 Integrase8.2e-1865.33Show/hide
Query:  PLEPILENPLNNTVGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGF
        P E  LEN LNN + EE PE+TL+ELYE ++HQRPI +VIPPT TNFHLRS+LISNLPIFRRS  E+P      F
Subjt:  PLEPILENPLNNTVGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGF

A0A5D3CU23 Retrotrans_gag domain-containing protein5.3e-0957.81Show/hide
Query:  SESNGFKRFEKGLQREICTPEIAIAMWTDFSQLVEIALRVEKKLGEEKSKVKPSQVVPLADGFR
        SES+  +RFE+GL+ EICTP  AIA WT+FSQLVE ALRVE+ + EEKS ++ S+ V    G R
Subjt:  SESNGFKRFEKGLQREICTPEIAIAMWTDFSQLVEIALRVEKKLGEEKSKVKPSQVVPLADGFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTGAAAATAGGGATTGATGAAGACACGATCTCAGACCCTGAGATCGTCTTCGGAGAGAAAGAACCTCCTTTAGAGCCAATCCTAGAGAACCCTTTAAACAATAC
AGTGGGAGAGGAGGTGCCCGAGAAAACCCTTAAGGAACTTTATGAGCCCAATGTGCATCAAAGGCCAATAGGTCTAGTCATCCCACCTACCCTAACAAACTTCCACCTTA
GGTCAGACTTGATCTCGAACTTACCCATCTTCAGAAGATCAAAAAGGGAGAATCCACCATCTGAGAGCAATGGATTCAAAAGGTTCGAGAAAGGGTTACAAAGAGAGATT
TGTACTCCCGAAATAGCAATAGCAATGTGGACTGACTTTTCACAGTTAGTCGAGATTGCTTTGCGGGTTGAGAAGAAATTGGGAGAGGAGAAGTCGAAAGTAAAACCTAG
TCAAGTTGTACCTTTGGCGGATGGATTTCGAGTCAAGACCAAAGACGTTTTACTCTTGGAATATCTAGGAGAACAAATTTCAAAGCTCGGTCCAATGGACAGTCATCTAG
GCGAGATAGTAAAGGGAGTGCCTATCCGAGGCAGAGGTAGATACTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATTGAAAATAGGGATTGATGAAGACACGATCTCAGACCCTGAGATCGTCTTCGGAGAGAAAGAACCTCCTTTAGAGCCAATCCTAGAGAACCCTTTAAACAATAC
AGTGGGAGAGGAGGTGCCCGAGAAAACCCTTAAGGAACTTTATGAGCCCAATGTGCATCAAAGGCCAATAGGTCTAGTCATCCCACCTACCCTAACAAACTTCCACCTTA
GGTCAGACTTGATCTCGAACTTACCCATCTTCAGAAGATCAAAAAGGGAGAATCCACCATCTGAGAGCAATGGATTCAAAAGGTTCGAGAAAGGGTTACAAAGAGAGATT
TGTACTCCCGAAATAGCAATAGCAATGTGGACTGACTTTTCACAGTTAGTCGAGATTGCTTTGCGGGTTGAGAAGAAATTGGGAGAGGAGAAGTCGAAAGTAAAACCTAG
TCAAGTTGTACCTTTGGCGGATGGATTTCGAGTCAAGACCAAAGACGTTTTACTCTTGGAATATCTAGGAGAACAAATTTCAAAGCTCGGTCCAATGGACAGTCATCTAG
GCGAGATAGTAAAGGGAGTGCCTATCCGAGGCAGAGGTAGATACTTTTAG
Protein sequenceShow/hide protein sequence
MRLKIGIDEDTISDPEIVFGEKEPPLEPILENPLNNTVGEEVPEKTLKELYEPNVHQRPIGLVIPPTLTNFHLRSDLISNLPIFRRSKRENPPSESNGFKRFEKGLQREI
CTPEIAIAMWTDFSQLVEIALRVEKKLGEEKSKVKPSQVVPLADGFRVKTKDVLLLEYLGEQISKLGPMDSHLGEIVKGVPIRGRGRYF