CuGenDBv2

Gene ID	PI0014462
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Photosystem II CP47 reaction center protein
Genome location	chr02:5591653..5593083
RNA-Seq Expression	PI0014462
Synteny	PI0014462
Gene Ontology terms	GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR000932 - Photosystem antenna protein-like IPR036001 - Photosystem antenna protein-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ALO21850.1 PsbB [Cucurbita argyrosperma subsp. sororia]

1.8e-207

77.39

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Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVS GLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HP+FRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

MBC9853836.1 hypothetical protein [Adiantum capillus-veneris]

7.9e-208

77.59

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHI+FSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVSTGLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

YP_004841809.1 photosystem II CP47 chlorophyll apoprotein [Cucumis melo subsp. melo]

3.6e-208

77.8

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Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVSTGLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

YP_009317412.1 photosystem II 47 kDa protein [Coccinia grandis]

1.3e-207

77.59

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVS GLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

YP_009751932.1 photosystem II 47 kDa protein [Cyclanthera pedata]

1.3e-207

77.59

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVS GLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU40 Photosystem II CP47 reaction center protein

1.7e-208

77.8

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVSTGLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

A0A249RXQ2 Photosystem II CP47 reaction center protein

1.7e-208

77.8

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVSTGLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

A0A249RZY7 Photosystem II CP47 reaction center protein

1.7e-208

77.8

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVSTGLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

A0A286NFP0 Photosystem II CP47 reaction center protein

1.7e-208

77.8

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVSTGLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

G3ETS3 Photosystem II CP47 reaction center protein

1.7e-208

77.8

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVSTGLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

SwissProt top hits

e value

%identity

Alignment

Q2MIG2 Photosystem II CP47 reaction center protein

5.7e-209

76.72

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT+ NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               ++CFGFGAFH++G YGPGIWVSDPYGLT +VQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVS GLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HP+FRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR

Q2QD63 Photosystem II CP47 reaction center protein

3.0e-210

77.39

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTI NPGIWSY GVAGAHI+FSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               L CFGFGAFH++G YGPGIWVSDPYGLT RVQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVSTGLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLD QVEFGAFQKLGDPTTKRV
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

Q33C06 Photosystem II CP47 reaction center protein

5.7e-209

76.72

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT+ NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               ++CFGFGAFH++G YGPGIWVSDPYGLT +VQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVS GLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HP+FRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR

Q3C1K3 Photosystem II CP47 reaction center protein

5.7e-209

76.72

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT+ NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               ++CFGFGAFH++G YGPGIWVSDPYGLT +VQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVS GLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HP+FRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR

Q7FNS4 Photosystem II CP47 reaction center protein

5.7e-209

76.72

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT+ NPGIWSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               ++CFGFGAFH++G YGPGIWVSDPYGLT +VQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVS GLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HP+FRDKEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR

Arabidopsis top hits

e value

%identity

Alignment

ATCG00280.1 photosystem II reaction center protein C

2.4e-13

23.17

Show/hide

Query:  HTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSI-TGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWVLS------
        H  L+  WAG+M L+E+A F P      PM+ QG+ ++P +  L       GW +  GG + +   +  SGV   H++ S +     I+H +L       
Subjt:  HTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSI-TGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWVLS------

Query:  ------------------------CFGFGAFHL--SGFYGPGIW---------VSDPYGLTERVQVV-----NPAWGVEGFDPFVPG--SIASHHIAAGT
                                  G GAF L     Y  G++         V     LT    V+        +G EG+   V     I   H+  G+
Subjt:  ------------------------CFGFGAFHL--SGFYGPGIW---------VSDPYGLTERVQVV-----NPAWGVEGFDPFVPG--SIASHHIAAGT

Query:  LGILAGLFHLSLRLPQRLYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQG----YFQQEIYRRVSTGLAENQT-FYDYI
        + I  G++H+ L  P    +  L+ + E  LS S+AA+    F+    + + +     E +GPT  +  Q     +  ++     + G A+  T    Y+
Subjt:  LGILAGLFHLSLRLPQRLYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQG----YFQQEIYRRVSTGLAENQT-FYDYI

Query:  GNNPTKGGLFRAGSMDNGDGIAVGWLEHPVFRDKEGRELFVRPESKYSVEEVGVTVEFYGGELNGVSYNVLGEIFELDRATLKSDGVFRSSPRGWFTFGH
          +PT   +F   +M   D +   WLE    R   G +L  R +      +   + E+       +++  LG +  +     + + V   SPR W +  H
Subjt:  GNNPTKGGLFRAGSMDNGDGIAVGWLEHPVFRDKEGRELFVRPESKYSVEEVGVTVEFYGGELNGVSYNVLGEIFELDRATLKSDGVFRSSPRGWFTFGH

Query:  ASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVE
               F GH+WH  R   R   AG +  +D   E
Subjt:  ASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVE

ATCG00680.1 photosystem II reaction center protein B

3.4e-209

76.51

Show/hide

Query:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------
        MHT LVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGW+ITGGTI NPG+WSY GVAGAHIVFSGLCFLAAIWHWV        
Subjt:  MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWV--------

Query:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR
                               ++CFGFGAFH++G YGPGIWVSDPYGLT +VQ VNPAWGVEGFDPFVPG IASHHIAAGTLGILAGLFHLS+R PQR
Subjt:  -----------------------LSCFGFGAFHLSGFYGPGIWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQR

Query:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL
        LYKGL +GNIETVLSSSIAAVFFAAFVVAGTM YGSATT IELFGPTRYQWDQGYFQQEIYRRVS GLAENQ+             FYDYIGNNP KGGL
Subjt:  LYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQT-------------FYDYIGNNPTKGGL

Query:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------
        FRAGSMDNGDGIAVGWL HPVFR+KEGRELFV                            R ESKYSVE+VGVTVEFYGGELNGVSY+            
Subjt:  FRAGSMDNGDGIAVGWLEHPVFRDKEGRELFV----------------------------RPESKYSVEEVGVTVEFYGGELNGVSYN------------

Query:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR
         LGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR
Subjt:  VLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCATACAACTCTAGTTGCTGGTTGGGCCGGTTCAATGGCCTTATACGAATTAGCAGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTT
TGTTATACCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGAGGTTGGAGTATCACAGGAGGGACTATAAGGAATCCGGGTATTTGGAGTTACTCAGGTGTGGCCG
GAGCACATATTGTCTTTTCTGGATTGTGCTTCTTAGCAGCTATCTGGCATTGGGTGTTGAGTTGCTTTGGTTTTGGTGCATTTCATCTAAGCGGATTCTATGGTCCGGGA
ATATGGGTATCCGATCCTTATGGATTAACCGAAAGGGTACAAGTCGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCTCCATAGCCTCACATCA
TATTGCAGCAGGTACATTGGGCATATTAGCGGGCCTATTCCATCTTAGTCTTCGTCTGCCCCAACGTCTATACAAAGGATTACTACTGGGAAATATTGAAACCGTCCTTT
CGAGTAGTATCGCTGCTGTATTTTTTGCAGCTTTTGTTGTTGCTGGAACTATGTGCTATGGTTCAGCAACTACCTCGATTGAATTATTTGGGCCCACTCGTTATCAATGG
GATCAGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGTACCGGGTTAGCCGAAAATCAAACTTTTTATGATTATATCGGGAATAATCCCACAAAAGGTGGATTATT
CAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGTTGGTTAGAACACCCTGTTTTTAGAGATAAAGAAGGACGCGAACTTTTTGTACGCCCAGAATCGAAGT
ATAGTGTTGAAGAGGTCGGTGTAACTGTTGAGTTCTATGGCGGTGAACTCAATGGAGTCAGTTATAACGTGTTGGGTGAAATTTTTGAATTAGATCGTGCTACTTTGAAA
TCCGATGGGGTTTTTCGCAGCAGTCCAAGGGGTTGGTTTACTTTTGGGCATGCTTCCTTTGCTTTGCTCTTCTTCTTCGGACACATTTGGCATGGTGCGAGAACCTTGTT
CAGAGATGTCTTTGCTGGGATTGACCCAGATTTGGACGCTCAAGTAGAATTTGGGGCATTCCAAAAACTTGGAGATCCAACTACAAAAAGAGTCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MHTTLVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTIRNPGIWSYSGVAGAHIVFSGLCFLAAIWHWVLSCFGFGAFHLSGFYGPG
IWVSDPYGLTERVQVVNPAWGVEGFDPFVPGSIASHHIAAGTLGILAGLFHLSLRLPQRLYKGLLLGNIETVLSSSIAAVFFAAFVVAGTMCYGSATTSIELFGPTRYQW
DQGYFQQEIYRRVSTGLAENQTFYDYIGNNPTKGGLFRAGSMDNGDGIAVGWLEHPVFRDKEGRELFVRPESKYSVEEVGVTVEFYGGELNGVSYNVLGEIFELDRATLK
SDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

PI0014462 (gene) of Melon (PI 482460) v1 genome