; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014467 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014467
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase-like protein
Genome locationchr05:16136951..16137565
RNA-Seq ExpressionPI0014467
SyntenyPI0014467
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653582.1 hypothetical protein Csa_007063 [Cucumis sativus]9.9e-0532.73Show/hide
Query:  DVDFKCQWLLNYVEEVDEG---FQKVSSGGLLCVDVVPRLHGVEFGRGVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVL
        D+  KC W L+YV+EV +       +  GG+                G  Y+ VD ACS+   AS +GVV LD   +VL A+AK +   ++P+L ++  +
Subjt:  DVDFKCQWLLNYVEEVDEG---FQKVSSGGLLCVDVVPRLHGVEFGRGVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVL

Query:  VEGLQFARSL
         EG+  A  L
Subjt:  VEGLQFARSL

KAF5451602.1 hypothetical protein F2P56_026695 [Juglans regia]2.9e-0429.51Show/hide
Query:  VDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLVLAFDD-SAEVGVWVNLICYSMRSFA
        VD A       + +G+++ D+   V+AA +KL     SP  +++  L+ GLQF     +P +++ +DCL++   + +      +    +N I   MR F 
Subjt:  VDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLVLAFDD-SAEVGVWVNLICYSMRSFA

Query:  CANVVHVSHLRNVAAHYIARRA
           ++HV+ L N+AAH +AR A
Subjt:  CANVVHVSHLRNVAAHYIARRA

RYE02783.1 reverse transcriptase-like protein, partial [Rickettsiaceae bacterium]1.3e-0428.15Show/hide
Query:  GVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLV-LAFDDSAEVGVWVNLICY
        G   + VD A +       +G +V D    V+A+    +   +SP L +++ +++G++  RS+      + SDCL V R++      + E+G  ++ I  
Subjt:  GVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLV-LAFDDSAEVGVWVNLICY

Query:  SMRSFACANVVHVSHLRNVAAHYIARRALRAGSFS
         +R      ++H+S L NVAAH +AR A+   S S
Subjt:  SMRSFACANVVHVSHLRNVAAHYIARRALRAGSFS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.0e-0628.04Show/hide
Query:  IHG-WASDVDFKCQWLLNYVEEVDEGFQKVSSGGLLCVDVVPRLHG-----VEFGRGVAYVLV----DVACSTCARASSLGVVVLDDWDSVLAAMAKLIP
        IHG   S V+FKC+WL  +++   +      S         PR        V++ R  + V +    D AC     ++S G ++ D   S++AA +  +P
Subjt:  IHG-WASDVDFKCQWLLNYVEEVDEGFQKVSSGGLLCVDVVPRLHG-----VEFGRGVAYVLV----DVACSTCARASSLGVVVLDDWDSVLAAMAKLIP

Query:  ISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLVL-AFDDSAEVGVWVNLICYSMRSFACANVVHVSHLRNVAAHYIARRALRAGSFSF---F
           SP+L +   ++EGL+FA + +   + V SD L+  +L+        +   WV  I      FA  +  H S   N AAH +A+  + + S ++   F
Subjt:  ISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLVL-AFDDSAEVGVWVNLICYSMRSFACANVVHVSHLRNVAAHYIARRALRAGSFSF---F

Query:  NYFPFWLLSAIVKD
        N FP WLL  + +D
Subjt:  NYFPFWLLSAIVKD

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]3.8e-0434.65Show/hide
Query:  GVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLVLAFDDSAEVGVWVNLICYS
        GV  + VD A S   R SS+GV++ D    V AA    +   YS   V++  +  GL  A+   LP I++ SD LVV   V + + S  +G     I   
Subjt:  GVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLVLAFDDSAEVGVWVNLICYS

Query:  MRSFACANVVHVSHLRNVAAHYIARRA
        + SF C  + HV    N AAH +A+ A
Subjt:  MRSFACANVVHVSHLRNVAAHYIARRA

TrEMBL top hitse value%identityAlignment
A0A0A0M389 Uncharacterized protein1.1e-0433.01Show/hide
Query:  DVDFKCQWLLNYVEEVDEG---FQKVSSGGLLCVDVVPRLHGVEFGRGVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVL
        D+  KC W L+YV+EV +       +  GG+                G  Y+ VD ACS+   AS +GVV LD   +VL A+AK +   ++P+L ++  +
Subjt:  DVDFKCQWLLNYVEEVDEG---FQKVSSGGLLCVDVVPRLHGVEFGRGVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVL

Query:  VEG
         EG
Subjt:  VEG

A0A4Q3DBE2 Reverse transcriptase-like protein (Fragment)6.3e-0528.15Show/hide
Query:  GVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLV-LAFDDSAEVGVWVNLICY
        G   + VD A +       +G +V D    V+A+    +   +SP L +++ +++G++  RS+      + SDCL V R++      + E+G  ++ I  
Subjt:  GVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLV-LAFDDSAEVGVWVNLICY

Query:  SMRSFACANVVHVSHLRNVAAHYIARRALRAGSFS
         +R      ++H+S L NVAAH +AR A+   S S
Subjt:  SMRSFACANVVHVSHLRNVAAHYIARRALRAGSFS

A0A6J1DX30 uncharacterized protein LOC1110248744.3e-0628.04Show/hide
Query:  IHG-WASDVDFKCQWLLNYVEEVDEGFQKVSSGGLLCVDVVPRLHG-----VEFGRGVAYVLV----DVACSTCARASSLGVVVLDDWDSVLAAMAKLIP
        IHG   S V+FKC+WL  +++   +      S         PR        V++ R  + V +    D AC     ++S G ++ D   S++AA +  +P
Subjt:  IHG-WASDVDFKCQWLLNYVEEVDEGFQKVSSGGLLCVDVVPRLHG-----VEFGRGVAYVLV----DVACSTCARASSLGVVVLDDWDSVLAAMAKLIP

Query:  ISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLVL-AFDDSAEVGVWVNLICYSMRSFACANVVHVSHLRNVAAHYIARRALRAGSFSF---F
           SP+L +   ++EGL+FA + +   + V SD L+  +L+        +   WV  I      FA  +  H S   N AAH +A+  + + S ++   F
Subjt:  ISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLVL-AFDDSAEVGVWVNLICYSMRSFACANVVHVSHLRNVAAHYIARRALRAGSFSF---F

Query:  NYFPFWLLSAIVKD
        N FP WLL  + +D
Subjt:  NYFPFWLLSAIVKD

A0A7N2L6Z9 Reverse transcriptase domain-containing protein1.8e-0432.81Show/hide
Query:  GVAYVLVDVACSTCARASS-LGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLVLAFDDSAEVGVWVNLICY
        GV  V VD ACS     SS +GVV+ D+   V+AA+ KL+P  +     + + + +GL  A+ + LP IM+ SD L     + + +   E G  V  I  
Subjt:  GVAYVLVDVACSTCARASS-LGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCLVVARLVLAFDDSAEVGVWVNLICY

Query:  SMRSFACANVVHVSHLRNVAAHYIARRA
        S   F+C +  ++    N+ AH +A+ A
Subjt:  SMRSFACANVVHVSHLRNVAAHYIARRA

A0A803QAI5 Uncharacterized protein9.0e-0431.06Show/hide
Query:  VDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCL-VVARLVLAFDDSAEVGVWVNLICYSMRSFA
        VD A +   + + LG  V +    V+AA++  +  + SP+L ++  L+  L++  ++  P   VASDCL +V RL   + D++     V  I   + SF 
Subjt:  VDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQFARSLSLPSIMVASDCL-VVARLVLAFDDSAEVGVWVNLICYSMRSFA

Query:  CANVVHVSHLRNVAAHYIARRALRAGSFSFFN
         A ++HV    NV AH +A+ A+R  S   +N
Subjt:  CANVVHVSHLRNVAAHYIARRALRAGSFSFFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTATCCATGGGTGGGCTTCTGATGTGGATTTTAAGTGTCAATGGTTGTTGAATTATGTGGAGGAAGTTGATGAGGGTTTTCAAAAGGTGTCATCGGGTGGATTATT
GTGCGTAGATGTGGTTCCTCGTCTGCATGGGGTGGAGTTTGGTAGAGGTGTTGCGTATGTCCTTGTTGATGTCGCTTGTTCGACTTGTGCTAGGGCTTCTAGTTTGGGGG
TGGTGGTGCTTGATGATTGGGATTCTGTTTTGGCGGCGATGGCTAAGCTTATCCCTATCTCGTACTCCCCGATGCTTGTCAAATCTTGGGTATTGGTGGAAGGACTGCAA
TTTGCTCGAAGCTTGTCTTTACCTTCGATTATGGTTGCTTCTGACTGTCTTGTTGTGGCGAGGCTTGTTTTGGCTTTTGATGATTCAGCGGAGGTCGGGGTTTGGGTGAA
CCTTATTTGTTATTCGATGCGGTCTTTTGCTTGTGCAAATGTTGTTCATGTTTCGCATTTAAGGAATGTTGCTGCTCATTATATTGCTCGTCGGGCTCTCCGGGCAGGCT
CCTTTTCTTTCTTCAATTATTTTCCTTTCTGGCTCCTTTCTGCTATTGTTAAGGATGTCGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTATCCATGGGTGGGCTTCTGATGTGGATTTTAAGTGTCAATGGTTGTTGAATTATGTGGAGGAAGTTGATGAGGGTTTTCAAAAGGTGTCATCGGGTGGATTATT
GTGCGTAGATGTGGTTCCTCGTCTGCATGGGGTGGAGTTTGGTAGAGGTGTTGCGTATGTCCTTGTTGATGTCGCTTGTTCGACTTGTGCTAGGGCTTCTAGTTTGGGGG
TGGTGGTGCTTGATGATTGGGATTCTGTTTTGGCGGCGATGGCTAAGCTTATCCCTATCTCGTACTCCCCGATGCTTGTCAAATCTTGGGTATTGGTGGAAGGACTGCAA
TTTGCTCGAAGCTTGTCTTTACCTTCGATTATGGTTGCTTCTGACTGTCTTGTTGTGGCGAGGCTTGTTTTGGCTTTTGATGATTCAGCGGAGGTCGGGGTTTGGGTGAA
CCTTATTTGTTATTCGATGCGGTCTTTTGCTTGTGCAAATGTTGTTCATGTTTCGCATTTAAGGAATGTTGCTGCTCATTATATTGCTCGTCGGGCTCTCCGGGCAGGCT
CCTTTTCTTTCTTCAATTATTTTCCTTTCTGGCTCCTTTCTGCTATTGTTAAGGATGTCGTTTAA
Protein sequenceShow/hide protein sequence
MCIHGWASDVDFKCQWLLNYVEEVDEGFQKVSSGGLLCVDVVPRLHGVEFGRGVAYVLVDVACSTCARASSLGVVVLDDWDSVLAAMAKLIPISYSPMLVKSWVLVEGLQ
FARSLSLPSIMVASDCLVVARLVLAFDDSAEVGVWVNLICYSMRSFACANVVHVSHLRNVAAHYIARRALRAGSFSFFNYFPFWLLSAIVKDVV