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PI0014493 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014493
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr06:15876629..15878010
RNA-Seq ExpressionPI0014493
SyntenyPI0014493
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.3e-2568.06Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI
        +KV KCGVCGL+GHPNDKCP+++E+ N+++KY+PH NTYN+GWRDNPNLRWGND+Q+  QA S+S+NQ TN+
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI

KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.6e-2466.67Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI
        +KV KCGVCGL+GHPNDKCP+++E+ N+++KY+PH NTYN+GWRDNPNLRWGND+Q+  QA  +S+NQ TN+
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-2367.61Show/hide
Query:  KVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI
        KV KCGVCGL+GHPNDKC  ++E+ N++++Y+PHSNTYN+GWRDNPNLRWGND+Q+  QA S+S+NQ TN+
Subjt:  KVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI

KAA0062012.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.2e-2465.28Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI
        +KV KCGVCGL+GHPNDKCP+++E+ N++++Y+PH NTYN+ WRDNPNLRWGND+Q+  QA S+S+NQ TN+
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]1.6e-2466.67Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI
        +KV KCGVCGL+GHPNDKCP+++E+ N+++KY+PH NTYN+GWRDNPNLRWGND+Q+  QA  +S+NQ TN+
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI

TrEMBL top hitse value%identityAlignment
A0A1S4E3R2 uncharacterized protein LOC1079919107.9e-2566.67Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI
        +KV KCGVCGL+GHPNDKCP+++E+ N+++KY+PH NTYN+GWRDNPNLRWGND+Q+  QA  +S+NQ TN+
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI

A0A5A7V1C6 Retrotransposon gag protein3.0e-2465.28Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI
        +KV KCGVCGL+GHPNDKCP+++E+ N++++Y+PH NTYN+ WRDNPNLRWGND+Q+  QA S+S+NQ TN+
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI

A0A5A7VQ60 Retrotransposon gag protein5.1e-2465.28Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI
        +KV KCGVCGL+GH N+KCP+++E+ N++++Y+PHSNTYN+GWRDNPNLRWGND+Q+  QA S+S+NQ TN+
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI

A0A5D3CRR8 Retrotransposon gag protein1.6e-2568.06Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI
        +KV KCGVCGL+GHPNDKCP+++E+ N+++KY+PH NTYN+GWRDNPNLRWGND+Q+  QA S+S+NQ TN+
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI

A0A5D3DCG3 Retrotransposon gag protein7.9e-2566.67Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI
        +KV KCGVCGL+GHPNDKCP+++E+ N+++KY+PH NTYN+GWRDNPNLRWGND+Q+  QA  +S+NQ TN+
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGTTGCCGAGGAGCGACAGTGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTAATTGGACATCCTAATGACAAGTGTCCTGACCTTGTGGAAGAGGC
AAATGTCATTAAGAAGTACAATCCTCATAGTAACACTTACAACGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAAACGATAGCCAACGACCCGCACAAGCAACTT
CATCTTCAAATAATCAAGCAACAAATATCTCAACTGACAAATGCAATAAGCAAGCTAGAAGGCAAAGGCAAGCTTCCAGCTCAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCGTTGCCGAGGAGCGACAGTGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTAATTGGACATCCTAATGACAAGTGTCCTGACCTTGTGGAAGAGGC
AAATGTCATTAAGAAGTACAATCCTCATAGTAACACTTACAACGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAAACGATAGCCAACGACCCGCACAAGCAACTT
CATCTTCAAATAATCAAGCAACAAATATCTCAACTGACAAATGCAATAAGCAAGCTAGAAGGCAAAGGCAAGCTTCCAGCTCAGCCTGA
Protein sequenceShow/hide protein sequence
MAPLPRSDSGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIKKYNPHSNTYNAGWRDNPNLRWGNDSQRPAQATSSSNNQATNISTDKCNKQARRQRQASSSA