; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014526 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014526
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:14672234..14674333
RNA-Seq ExpressionPI0014526
SyntenyPI0014526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]4.1e-2940.08Show/hide
Query:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------
        + FC  D  S SFVR+TL++F EL GL ANLGK S+FVAG  +E AS L  +M F L   PV YL +PL                               
Subjt:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------

Query:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGK----------KEGRGGAKVAWGECD-------WSV-------LVLCAIL
             LV    RS  V+WAS+FVLP  VH++VD++L  YL R  ++G                      VAW E         W+V         L AIL
Subjt:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGK----------KEGRGGAKVAWGECD-------WSV-------LVLCAIL

Query:  QQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI
        ++RDSL+ H+ + V D   C VWLD WLQG  I+ Q+GERV+Y A S REARLSEFI
Subjt:  QQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI

KAA0048521.1 uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa]7.5e-0771.11Show/hide
Query:  RVH-EACGESPVSSDMEEFDHAIHEADLVESSVQGNWFTWTSKVR
        RVH EA G SP+  +ME+FD AI +ADLVE SVQGNWFTWTSK R
Subjt:  RVH-EACGESPVSSDMEEFDHAIHEADLVESSVQGNWFTWTSKVR

KAA0048521.1 uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa]4.4e-3137.46Show/hide
Query:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------
        + FCA D  S  F+R+ L++F ELSGL AN  KSS+FVAGV++E AS L   M F     P+ YLG+PL                               
Subjt:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------

Query:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGKK------------------------------------EGRGGAKVAW--
             LV   LRS  V+WAS+FVLP  VHHEVD++L+ YL RGK+EGR G K                                       G   VAW  
Subjt:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGKK------------------------------------EGRGGAKVAW--

Query:  -----GECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI
             G   W V         L AIL++R+ L+  + M V +   C VWLD WL G +I+ Q+GERV+Y A S REARLS+FI
Subjt:  -----GECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]2.7e-4151.23Show/hide
Query:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLFLVGCDLRSVFWASMFVLPVGVHHEVDRLLM
        + FC  D  S SF+R++L++F EL GL ANL KSS+FVAG  +E AS L  SM F L   PV YLG+PL        +V+WAS+FVLP  VH+EVD++L 
Subjt:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLFLVGCDLRSVFWASMFVLPVGVHHEVDRLLM

Query:  LYLQRGKKEGRRGKKEGRGGAKVAWGECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLS
         YL RGK+EGRRG K     A +  G   W V         L AIL++RD L+ H+ M V D   C VWLD WLQGG I+ Q+ E V+Y A S REARLS
Subjt:  LYLQRGKKEGRRGKKEGRGGAKVAWGECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLS

Query:  EFI
        EFI
Subjt:  EFI

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]7.5e-0771.11Show/hide
Query:  RVH-EACGESPVSSDMEEFDHAIHEADLVESSVQGNWFTWTSKVR
        RVH EA G SP+  +ME+FD AI +ADLVE SVQGNWFTWTSK R
Subjt:  RVH-EACGESPVSSDMEEFDHAIHEADLVESSVQGNWFTWTSKVR

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]2.7e-4151.23Show/hide
Query:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLFLVGCDLRSVFWASMFVLPVGVHHEVDRLLM
        + FC  D  S SF+R++L++F EL GL ANL KSS+FVAG  +E AS L  SM F L   PV YLG+PL        +V+WAS+FVLP  VH+EVD++L 
Subjt:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLFLVGCDLRSVFWASMFVLPVGVHHEVDRLLM

Query:  LYLQRGKKEGRRGKKEGRGGAKVAWGECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLS
         YL RGK+EGRRG K     A +  G   W V         L AIL++RD L+ H+ M V D   C VWLD WLQGG I+ Q+ E V+Y A S REARLS
Subjt:  LYLQRGKKEGRRGKKEGRGGAKVAWGECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLS

Query:  EFI
        EFI
Subjt:  EFI

XP_031740402.1 uncharacterized protein LOC116403409 [Cucumis sativus]1.1e-2934.48Show/hide
Query:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------
        + FC  D  S SF+++T+++F ELSGL ANL KS +F+ GV+S  AS L  +M F++   PV YLG+PL                               
Subjt:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------

Query:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGKKEGRGGAKVAWGECD-------------------------WSVLVLCA-
             LV   LRS  V+WAS+F+LP+ VH +VD++L  YL        RG +EGRGGAKVAW E                           W +LV    
Subjt:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGKKEGRGGAKVAWGECD-------------------------WSVLVLCA-

Query:  -------------------------------ILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI
                                       IL++RD L++H+ M V + R C VWL  W+QGG II Q GERV+Y A S  +ARL +F+
Subjt:  -------------------------------ILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI

TrEMBL top hitse value%identityAlignment
A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein2.0e-2940.08Show/hide
Query:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------
        + FC  D  S SFVR+TL++F EL GL ANLGK S+FVAG  +E AS L  +M F L   PV YL +PL                               
Subjt:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------

Query:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGK----------KEGRGGAKVAWGECD-------WSV-------LVLCAIL
             LV    RS  V+WAS+FVLP  VH++VD++L  YL R  ++G                      VAW E         W+V         L AIL
Subjt:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGK----------KEGRGGAKVAWGECD-------WSV-------LVLCAIL

Query:  QQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI
        ++RDSL+ H+ + V D   C VWLD WLQG  I+ Q+GERV+Y A S REARLSEFI
Subjt:  QQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI

A0A5A7U4M4 Reverse transcriptase domain-containing protein3.6e-0771.11Show/hide
Query:  RVH-EACGESPVSSDMEEFDHAIHEADLVESSVQGNWFTWTSKVR
        RVH EA G SP+  +ME+FD AI +ADLVE SVQGNWFTWTSK R
Subjt:  RVH-EACGESPVSSDMEEFDHAIHEADLVESSVQGNWFTWTSKVR

A0A5A7U4M4 Reverse transcriptase domain-containing protein2.1e-3137.46Show/hide
Query:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------
        + FCA D  S  F+R+ L++F ELSGL AN  KSS+FVAGV++E AS L   M F     P+ YLG+PL                               
Subjt:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------

Query:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGKK------------------------------------EGRGGAKVAW--
             LV   LRS  V+WAS+FVLP  VHHEVD++L+ YL RGK+EGR G K                                       G   VAW  
Subjt:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGKK------------------------------------EGRGGAKVAW--

Query:  -----GECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI
             G   W V         L AIL++R+ L+  + M V +   C VWLD WL G +I+ Q+GERV+Y A S REARLS+FI
Subjt:  -----GECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI

A0A5A7V3Z0 Reverse transcriptase domain-containing protein4.9e-2836.75Show/hide
Query:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------
        + FCA +  S  F+R+ L++F ELSGL AN  KSS+FVAGV++E AS L   M F      V YLG+PL                               
Subjt:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLF------------------------------

Query:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGKK-----------EG-------------------------RGGAKVAW--
             LV   LRS  V+WAS+FVLP  VH+EVD++L  YL RGK+EGR G K           EG                          G   VAW  
Subjt:  -----LVGCDLRS--VFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGKK-----------EG-------------------------RGGAKVAW--

Query:  -----GECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI
             G   W V         L AIL++R+ L+  + M V +     VWLD WL  G+I+ Q+GERV+Y A S R+ARLS+FI
Subjt:  -----GECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFI

A0A5D3DXQ8 Reverse transcriptase domain-containing protein1.3e-4151.23Show/hide
Query:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLFLVGCDLRSVFWASMFVLPVGVHHEVDRLLM
        + FC  D  S SF+R++L++F EL GL ANL KSS+FVAG  +E AS L  SM F L   PV YLG+PL        +V+WAS+FVLP  VH+EVD++L 
Subjt:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLFLVGCDLRSVFWASMFVLPVGVHHEVDRLLM

Query:  LYLQRGKKEGRRGKKEGRGGAKVAWGECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLS
         YL RGK+EGRRG K     A +  G   W V         L AIL++RD L+ H+ M V D   C VWLD WLQGG I+ Q+ E V+Y A S REARLS
Subjt:  LYLQRGKKEGRRGKKEGRGGAKVAWGECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLS

Query:  EFI
        EFI
Subjt:  EFI

A0A5D3DXQ8 Reverse transcriptase domain-containing protein3.6e-0771.11Show/hide
Query:  RVH-EACGESPVSSDMEEFDHAIHEADLVESSVQGNWFTWTSKVR
        RVH EA G SP+  +ME+FD AI +ADLVE SVQGNWFTWTSK R
Subjt:  RVH-EACGESPVSSDMEEFDHAIHEADLVESSVQGNWFTWTSKVR

A0A5D3DXQ8 Reverse transcriptase domain-containing protein1.3e-4151.23Show/hide
Query:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLFLVGCDLRSVFWASMFVLPVGVHHEVDRLLM
        + FC  D  S SF+R++L++F EL GL ANL KSS+FVAG  +E AS L  SM F L   PV YLG+PL        +V+WAS+FVLP  VH+EVD++L 
Subjt:  LTFCAIDISSTSFVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLFLVGCDLRSVFWASMFVLPVGVHHEVDRLLM

Query:  LYLQRGKKEGRRGKKEGRGGAKVAWGECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLS
         YL RGK+EGRRG K     A +  G   W V         L AIL++RD L+ H+ M V D   C VWLD WLQGG I+ Q+ E V+Y A S REARLS
Subjt:  LYLQRGKKEGRRGKKEGRGGAKVAWGECDWSV-------LVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLS

Query:  EFI
        EFI
Subjt:  EFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGGTTGTGTCAAAGGCTAAGCCTGATGGAGGACTGCCTTCTACGTCCGTTTATGAAGAGCTTAGCTCCGTCCTCAGCTGGTTTTTGTTGTCTCTTGGAGACAAG
AGTTCATGAGGCTTGTGGTGAGAGTCCGGTTTCTAGTGATATGGAGGAGTTTGATCATGCTATTCATGAGGCTGACTTAGTTGAGTCGTCGGTTCAGGGTAACTGGTTTA
CATGGACGAGTAAGGTGCGTGGTTCTGGTTGGTTGCTTGGCTTGATTGTGTTTTGGTTAAAGGAGTGGTGGCGGTTAACTTTTTGTGCTATTGATATCTCTTCCACTAGC
TTTGTGCGCAAGACTCTTCGTCAGTTTGTGGAGTTATCGGGTTTGGTTGCTAATCTTGGGAAGAGCTCTATGTTTGTTGCGGGGGTTGACAGTGAGGGTGCTTCTGTGTT
GGTGGATAGTATGAGGTTTGCACTAAGTACTTTTCCGGTTTATTACCTTGGTATTCCCTTATTTCTGGTAGGCTGCGATCTTCGGAGTGTCTTTTGGGCCAGTATGTTTG
TTTTGCCGGTGGGTGTTCATCATGAAGTTGATAGGCTTTTGATGTTGTATCTCCAGAGGGGTAAGAAGGAAGGGAGAAGGGGTAAGAAGGAAGGGAGAGGGGGTGCGAAG
GTTGCTTGGGGGGAGTGTGATTGGTCAGTCCTGGTGCTTTGTGCTATCCTGCAACAACGTGATAGCCTTAGAGAGCATATCCATATGGTGGTTAGTGATAGGAGGCATTG
TCATGTGTGGCTTGACCTTTGGTTGCAGGGAGGCTCGATCATTGGGCAGATTGGAGAGAGGGTGGTGTATGTTGCAGAGAGTAGTAGGGAGGCTAGACTTTCTGAGTTCA
TTATTCAGATGGTGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGATTTGTGGGAGAAGGTTCAGGGCGTCAGTCCGTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCGGTTGTGTCAAAGGCTAAGCCTGATGGAGGACTGCCTTCTACGTCCGTTTATGAAGAGCTTAGCTCCGTCCTCAGCTGGTTTTTGTTGTCTCTTGGAGACAAG
AGTTCATGAGGCTTGTGGTGAGAGTCCGGTTTCTAGTGATATGGAGGAGTTTGATCATGCTATTCATGAGGCTGACTTAGTTGAGTCGTCGGTTCAGGGTAACTGGTTTA
CATGGACGAGTAAGGTGCGTGGTTCTGGTTGGTTGCTTGGCTTGATTGTGTTTTGGTTAAAGGAGTGGTGGCGGTTAACTTTTTGTGCTATTGATATCTCTTCCACTAGC
TTTGTGCGCAAGACTCTTCGTCAGTTTGTGGAGTTATCGGGTTTGGTTGCTAATCTTGGGAAGAGCTCTATGTTTGTTGCGGGGGTTGACAGTGAGGGTGCTTCTGTGTT
GGTGGATAGTATGAGGTTTGCACTAAGTACTTTTCCGGTTTATTACCTTGGTATTCCCTTATTTCTGGTAGGCTGCGATCTTCGGAGTGTCTTTTGGGCCAGTATGTTTG
TTTTGCCGGTGGGTGTTCATCATGAAGTTGATAGGCTTTTGATGTTGTATCTCCAGAGGGGTAAGAAGGAAGGGAGAAGGGGTAAGAAGGAAGGGAGAGGGGGTGCGAAG
GTTGCTTGGGGGGAGTGTGATTGGTCAGTCCTGGTGCTTTGTGCTATCCTGCAACAACGTGATAGCCTTAGAGAGCATATCCATATGGTGGTTAGTGATAGGAGGCATTG
TCATGTGTGGCTTGACCTTTGGTTGCAGGGAGGCTCGATCATTGGGCAGATTGGAGAGAGGGTGGTGTATGTTGCAGAGAGTAGTAGGGAGGCTAGACTTTCTGAGTTCA
TTATTCAGATGGTGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGATTTGTGGGAGAAGGTTCAGGGCGTCAGTCCGTGTCTGA
Protein sequenceShow/hide protein sequence
MDRLCQRLSLMEDCLLRPFMKSLAPSSAGFCCLLETRVHEACGESPVSSDMEEFDHAIHEADLVESSVQGNWFTWTSKVRGSGWLLGLIVFWLKEWWRLTFCAIDISSTS
FVRKTLRQFVELSGLVANLGKSSMFVAGVDSEGASVLVDSMRFALSTFPVYYLGIPLFLVGCDLRSVFWASMFVLPVGVHHEVDRLLMLYLQRGKKEGRRGKKEGRGGAK
VAWGECDWSVLVLCAILQQRDSLREHIHMVVSDRRHCHVWLDLWLQGGSIIGQIGERVVYVAESSREARLSEFIIQMVSGGGRGFLGSYLICGRRFRASVRV