; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014533 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014533
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr09:13213671..13215299
RNA-Seq ExpressionPI0014533
SyntenyPI0014533
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]1.6e-8874.15Show/hide
Query:  VDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKY
        VD AAGGALADKTPTE  ELI RM ENSQNFGNRA ELDN LTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVC LVGHPNDKCP+++E+ N++RKY
Subjt:  VDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKY

Query:  DPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKILET
        DP+ NTYN+GWRDN NLRW NDN + +QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GK KLPAQPD+ANVSAISLRSGKIL+T
Subjt:  DPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKILET

Query:  -SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK
         +  E+KVTS  + L +K E KEEK+ETN  PS+SK
Subjt:  -SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK

KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.3e-8872.92Show/hide
Query:  DRNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVD AAGGALA+K PTE RELISRMA+NSQ FGNRASEL+NSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KC VCGLVGHPNDKCP+++EE N+
Subjt:  DRNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGK
        ++KYDP+SNTYN GWRDN  LRW NDN + +QA ++S+NQ TNL+D++KALATNT+SFQ EMKQQM+ LT  ISK++GK KLPAQP+HANVS ISLRSGK
Subjt:  IRKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGK

Query:  ILET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK
        IL+T S  E+KVTS P+ L +K E KEEK+ETN   S+ K
Subjt:  ILET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.9e-9064.81Show/hide
Query:  DRNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVD  AGGALADK PTE RELIS+MAENSQ+F NRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+ N+
Subjt:  DRNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGK
        +RKYDPH NTYN+GWRDN NLRW NDN + +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GK KL AQ ++ANVSA+SLRSGK
Subjt:  IRKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGK

Query:  ILET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSKELHYELEELPICEEFSKQEFDDELCMHEFDDDKKMVEVEMDEKLNLD
        IL+T +  E+K TS P+ L  K E KEEK+ETN  P +SK   + L +        K  F   L   + +  KK   +EM  K+ ++
Subjt:  ILET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSKELHYELEELPICEEFSKQEFDDELCMHEFDDDKKMVEVEMDEKLNLD

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.9e-8974.48Show/hide
Query:  NTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVI
        NTVD A G ALADKTPTE RELISRMA+N Q+FGNRASE DNSLTKEVSELKSQMLNM TTLLTSFVQG  +KV KCGVCGLVGH N+KCP+++E+ N++
Subjt:  NTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKI
        R+YDPHSNTYN+GWRDN NLRW NDN + +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GK KLPAQ DHANVSAISLRSGKI
Subjt:  RKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKI

Query:  LET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK
        L+T +  E+KVTS P+ L +K E KEEK+ETN  PS+SK
Subjt:  LET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.1e-9176.19Show/hide
Query:  RNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVI
        RNT+D AAGGALADKTPTE RELISRMAENS++FGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKCP ++E+ N++
Subjt:  RNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKI
        R+YDPHSNTYN+GWRDN NLRW NDN + +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GK KLPAQPDHANVSAISLRSGKI
Subjt:  RKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKI

Query:  LET-SASEEKVTSTPILLENKEEKKEEKLET
        L+T +  E+K+TS P+ L +K E KEEK+++
Subjt:  LET-SASEEKVTSTPILLENKEEKKEEKLET

TrEMBL top hitse value%identityAlignment
A0A5A7SRF5 Retrotransposon gag protein6.1e-8972.92Show/hide
Query:  DRNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVD AAGGALA+K PTE RELISRMA+NSQ FGNRASEL+NSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KC VCGLVGHPNDKCP+++EE N+
Subjt:  DRNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGK
        ++KYDP+SNTYN GWRDN  LRW NDN + +QA ++S+NQ TNL+D++KALATNT+SFQ EMKQQM+ LT  ISK++GK KLPAQP+HANVS ISLRSGK
Subjt:  IRKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGK

Query:  ILET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK
        IL+T S  E+KVTS P+ L +K E KEEK+ETN   S+ K
Subjt:  ILET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK

A0A5A7VQ60 Retrotransposon gag protein9.4e-9074.48Show/hide
Query:  NTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVI
        NTVD A G ALADKTPTE RELISRMA+N Q+FGNRASE DNSLTKEVSELKSQMLNM TTLLTSFVQG  +KV KCGVCGLVGH N+KCP+++E+ N++
Subjt:  NTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKI
        R+YDPHSNTYN+GWRDN NLRW NDN + +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GK KLPAQ DHANVSAISLRSGKI
Subjt:  RKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKI

Query:  LET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK
        L+T +  E+KVTS P+ L +K E KEEK+ETN  PS+SK
Subjt:  LET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK

A0A5D3CB46 Retrotransposon gag protein1.0e-9176.19Show/hide
Query:  RNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVI
        RNT+D AAGGALADKTPTE RELISRMAENS++FGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKCP ++E+ N++
Subjt:  RNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKI
        R+YDPHSNTYN+GWRDN NLRW NDN + +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GK KLPAQPDHANVSAISLRSGKI
Subjt:  RKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKI

Query:  LET-SASEEKVTSTPILLENKEEKKEEKLET
        L+T +  E+K+TS P+ L +K E KEEK+++
Subjt:  LET-SASEEKVTSTPILLENKEEKKEEKLET

A0A5D3CRR8 Retrotransposon gag protein1.9e-9064.81Show/hide
Query:  DRNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVD  AGGALADK PTE RELIS+MAENSQ+F NRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+ N+
Subjt:  DRNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGK
        +RKYDPH NTYN+GWRDN NLRW NDN + +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GK KL AQ ++ANVSA+SLRSGK
Subjt:  IRKYDPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGK

Query:  ILET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSKELHYELEELPICEEFSKQEFDDELCMHEFDDDKKMVEVEMDEKLNLD
        IL+T +  E+K TS P+ L  K E KEEK+ETN  P +SK   + L +        K  F   L   + +  KK   +EM  K+ ++
Subjt:  ILET-SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSKELHYELEELPICEEFSKQEFDDELCMHEFDDDKKMVEVEMDEKLNLD

E5GBZ4 Retrotransposon gag protein7.9e-8974.15Show/hide
Query:  VDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKY
        VD AAGGALADKTPTE  ELI RM ENSQNFGNRA ELDN LTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVC LVGHPNDKCP+++E+ N++RKY
Subjt:  VDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKY

Query:  DPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKILET
        DP+ NTYN+GWRDN NLRW NDN + +QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GK KLPAQPD+ANVSAISLRSGKIL+T
Subjt:  DPHSNTYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKILET

Query:  -SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK
         +  E+KVTS  + L +K E KEEK+ETN  PS+SK
Subjt:  -SASEEKVTSTPILLENKEEKKEEKLETNTLPSSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAAATACAGTAGACACTGCAGCAGGGGGTGCCTTGGCAGACAAAACCCCTACTGAAGTGAGAGAGCTCATTTCAAGGATGGCAGAAAATTCACAAAACTTTGG
GAATAGAGCATCTGAGCTCGACAATTCATTAACCAAGGAAGTAAGTGAACTTAAATCACAAATGCTTAATATGACTACCTTACTAACTTCCTTTGTGCAAGGTGGATCTG
TTAAAGTTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAAT
ACTTACAATGCCGGTTGGAGAGACAACTCAAATCTAAGATGGAAAAACGACAACCCAAGACCCTCGCAAGCGACTTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGA
TTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTGACGAATGCAATAAGCAAATTAGAAGGTAAAGACAAACTTC
CGGCTCAACCAGACCATGCTAATGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCTCTGCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAA
AATAAAGAAGAGAAAAAGGAAGAAAAATTAGAAACGAATACGCTACCATCTAGTTCTAAAGAATTGCATTATGAATTAGAAGAATTGCCTATTTGTGAAGAATTTTCTAA
ACAAGAATTTGATGATGAGCTTTGTATGCATGAGTTTGATGATGATAAAAAGATGGTAGAAGTAGAAATGGATGAAAAATTAAATCTTGATGGAAATAATACTGACAATT
TTTTCTTCTCCCCAGGAAAAAAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAAATACAGTAGACACTGCAGCAGGGGGTGCCTTGGCAGACAAAACCCCTACTGAAGTGAGAGAGCTCATTTCAAGGATGGCAGAAAATTCACAAAACTTTGG
GAATAGAGCATCTGAGCTCGACAATTCATTAACCAAGGAAGTAAGTGAACTTAAATCACAAATGCTTAATATGACTACCTTACTAACTTCCTTTGTGCAAGGTGGATCTG
TTAAAGTTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAAT
ACTTACAATGCCGGTTGGAGAGACAACTCAAATCTAAGATGGAAAAACGACAACCCAAGACCCTCGCAAGCGACTTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGA
TTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTGACGAATGCAATAAGCAAATTAGAAGGTAAAGACAAACTTC
CGGCTCAACCAGACCATGCTAATGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCTCTGCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAA
AATAAAGAAGAGAAAAAGGAAGAAAAATTAGAAACGAATACGCTACCATCTAGTTCTAAAGAATTGCATTATGAATTAGAAGAATTGCCTATTTGTGAAGAATTTTCTAA
ACAAGAATTTGATGATGAGCTTTGTATGCATGAGTTTGATGATGATAAAAAGATGGTAGAAGTAGAAATGGATGAAAAATTAAATCTTGATGGAAATAATACTGACAATT
TTTTCTTCTCCCCAGGAAAAAAGGATTGA
Protein sequenceShow/hide protein sequence
MDRNTVDTAAGGALADKTPTEVRELISRMAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSN
TYNAGWRDNSNLRWKNDNPRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKDKLPAQPDHANVSAISLRSGKILETSASEEKVTSTPILLE
NKEEKKEEKLETNTLPSSSKELHYELEELPICEEFSKQEFDDELCMHEFDDDKKMVEVEMDEKLNLDGNNTDNFFFSPGKKD