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PI0014552 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014552
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr04:15430389..15439797
RNA-Seq ExpressionPI0014552
SyntenyPI0014552
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065940.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.8e-4547.98Show/hide
Query:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC
        M++ Q+VNDRNLALKLA  +    +       T+R +   E++         Q KT     +  M++ITIPI+ NY K  PPVKRLSD EFRTRLD+GLC
Subjt:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC

Query:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK
        F CN+ YSP H CK K   ELM FI NE+EE ++    +E E  T+ELK ++IT+ T+I L T+ G   KGT+KLKG +  K++V+LI+  A+ NFIHQ 
Subjt:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK

Query:  LVEELNLKVMEGTKFEVTIGDDT
        L EEL +++ + T F VTIGD T
Subjt:  LVEELNLKVMEGTKFEVTIGDDT

XP_016901651.1 PREDICTED: uncharacterized protein LOC103495179 [Cucumis melo]4.8e-4547.98Show/hide
Query:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC
        M++ Q+VNDRNLALKLA  +    +       T+R +   E++         Q KT     +  M++ITIPI+ NY K  PPVKRLSD EFRTRLD+GLC
Subjt:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC

Query:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK
        F CN+ YSP H CK K   ELM FI NE+EE ++    +E E  T+ELK ++IT+ T+I L T+ G   KGT+KLKG +  K++V+LI+  A+ NFIHQ 
Subjt:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK

Query:  LVEELNLKVMEGTKFEVTIGDDT
        L EEL +++ + T F VTIGD T
Subjt:  LVEELNLKVMEGTKFEVTIGDDT

XP_031737605.1 uncharacterized protein LOC116402475 [Cucumis sativus]3.7e-4548.43Show/hide
Query:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC
        M++ QLVNDRN+ALKLA  +   ++       +++  G  EK+ N        KKT     E  M+++TIP++ +Y K  PP+KRLSD EFR RLDKGLC
Subjt:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC

Query:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK
        F CNEKYSP H CKG+   ELML I NE+E+ +     E+   E +EL ++++ ++T I L  I G   KGT+KLKG +NGKEVVILI+ GA+NNFI Q 
Subjt:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK

Query:  LVEELNLKVMEGTKFEVTIGDDT
        LV+EL L +  GT+F V IG+ T
Subjt:  LVEELNLKVMEGTKFEVTIGDDT

XP_031745472.1 uncharacterized protein K02A2.6-like [Cucumis sativus]4.1e-4447.51Show/hide
Query:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC
        M++ QLVNDRN+ALKLA  +   ++   N          + K    N      +KT  K  E  M+++TIP++ +Y K  PP+KRLSD EFR RLDKGLC
Subjt:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC

Query:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK
        F CNEKY+P H CKG+   ELML I NE+E+    E+ E+   E +EL  +++  +  I L  I G   KGT+KLKG +NG+EVVILI+ GA+NNFI Q 
Subjt:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK

Query:  LVEELNLKVMEGTKFEVTIGD
        LV+EL L +  GT+F VTIG+
Subjt:  LVEELNLKVMEGTKFEVTIGD

XP_031745528.1 uncharacterized protein LOC116405915 [Cucumis sativus]3.0e-4750.22Show/hide
Query:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC
        MR+ QLVNDRNLAL+ + A+          G TN+   G EK           +KT     E  ++++TIPI+ NY K  PPVKRLSD EFR RLDKGLC
Subjt:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC

Query:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK
        F CNE+YSP H CK K   ELMLFI NE+E ++D +  EE   E LEL ++ + + T+I L  I+G   KGT+K+KG I GKEV+ILI+ GA++NFIH K
Subjt:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK

Query:  LVEELNLKVMEGTKFEVTIGDDT
        +VEE+ L++   T F VTIGD T
Subjt:  LVEELNLKVMEGTKFEVTIGDDT

TrEMBL top hitse value%identityAlignment
A0A1S3BJT6 uncharacterized protein LOC1034903755.7e-4447.98Show/hide
Query:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC
        MR+ QLVNDRNLALKL         S   +G T    GG+ K+     +     K   +  +  M++ITIPI+ N+ K  PPVKRLSD EFR RLD+GLC
Subjt:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC

Query:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK
        F CN+KYSP H CK K   ELM FI NE+EE ++ E  EEV   T+ELK +++T++  I + T+     KGT+K+KG I  KE+VILI+ GA++NFIHQ 
Subjt:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK

Query:  LVEELNLKVMEGTKFEVTIGDDT
        LV +L L + + T+F  TIG+ T
Subjt:  LVEELNLKVMEGTKFEVTIGDDT

A0A1S4E096 uncharacterized protein LOC1034951792.3e-4547.98Show/hide
Query:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC
        M++ Q+VNDRNLALKLA  +    +       T+R +   E++         Q KT     +  M++ITIPI+ NY K  PPVKRLSD EFRTRLD+GLC
Subjt:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC

Query:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK
        F CN+ YSP H CK K   ELM FI NE+EE ++    +E E  T+ELK ++IT+ T+I L T+ G   KGT+KLKG +  K++V+LI+  A+ NFIHQ 
Subjt:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK

Query:  LVEELNLKVMEGTKFEVTIGDDT
        L EEL +++ + T F VTIGD T
Subjt:  LVEELNLKVMEGTKFEVTIGDDT

A0A5A7UYM1 Ty3/gypsy retrotransposon protein3.4e-4448.88Show/hide
Query:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC
        MR+ QLVNDRN ALKL         S   +G T   +GG+ K+     +     K   +  +  M++ITIPI+ N+ K  PPVKRLSD EFR RLD+GLC
Subjt:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC

Query:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK
        F CN+KYSP H CK K   ELM FI NE+EE ++ +  EEV  ET+ELK +++T ET I L T+     KGT+KLKG I  KEVV+LI+ GA++NFIH  
Subjt:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK

Query:  LVEELNLKVMEGTKFEVTIGDDT
        L  EL L +   T F  TIG+ T
Subjt:  LVEELNLKVMEGTKFEVTIGDDT

A0A5A7V4F5 Retrotransposon protein1.3e-4345.74Show/hide
Query:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC
        MR+ QLVNDRNLALKL   +         +G T    GG+ K   T  +           R+T  +   IPI+ ++ K  PPVKRLSD EFR RLD+GLC
Subjt:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC

Query:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK
        F CN+KYSP H CK K   ELM FI NE++E ++V   +E+   T+ELK +++T++T+I L T+     KGT+KLKG +  KE+V+LIN GA++NFIHQ 
Subjt:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK

Query:  LVEELNLKVMEGTKFEVTIGDDT
        L +EL + + + T+F  TIG+ T
Subjt:  LVEELNLKVMEGTKFEVTIGDDT

A0A5D3E328 Reverse transcriptase2.3e-4547.98Show/hide
Query:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC
        M++ Q+VNDRNLALKLA  +    +       T+R +   E++         Q KT     +  M++ITIPI+ NY K  PPVKRLSD EFRTRLD+GLC
Subjt:  MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLC

Query:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK
        F CN+ YSP H CK K   ELM FI NE+EE ++    +E E  T+ELK ++IT+ T+I L T+ G   KGT+KLKG +  K++V+LI+  A+ NFIHQ 
Subjt:  FHCNEKYSPTHHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQK

Query:  LVEELNLKVMEGTKFEVTIGDDT
        L EEL +++ + T F VTIGD T
Subjt:  LVEELNLKVMEGTKFEVTIGDDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGACCCAATTAGTGAATGACAGAAATTTAGCCTTGAAGTTAGCCACTGCTAAGTCCAGATCATTGAAGAGTGGCAACAACATGGGACAAACTAATAGAACTTT
GGGAGGCACGGAAAAGATGACTAACACCAATCCACTAATACTCTGCCAGAAAAAAACTGGGCAAAAAGGGCGTGAAACTTATATGAGAAAAATTACGATTCCCATTCGGC
AAAACTATGTGAAATGTGTGCCACCGGTGAAGAGGTTGTCTGACGGTGAGTTTCGAACACGCCTCGACAAAGGTTTGTGCTTCCACTGCAATGAGAAGTATTCACCCACA
CATCATTGTAAGGGAAAGGGAAATTGGGAGTTGATGTTATTCATATTCAACGAGGATGAAGAAATAGACGATGTGGAAGAAGCCGAAGAAGTTGAAGTTGAAACATTGGA
ATTAAAAAGGATCAAAATCACAAAAGAAACAAAAATCCCACTTCACACCATCAATGGGTTTCCCGAAAAGGGGACTATTAAGCTAAAGGGTGGAATTAACGGCAAAGAGG
TTGTTATATTAATCAATATTGGAGCGTCAAATAATTTCATACACCAGAAATTAGTAGAGGAATTGAATTTGAAGGTAATGGAAGGAACAAAATTTGAAGTTACAATAGGA
GATGACACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGACCCAATTAGTGAATGACAGAAATTTAGCCTTGAAGTTAGCCACTGCTAAGTCCAGATCATTGAAGAGTGGCAACAACATGGGACAAACTAATAGAACTTT
GGGAGGCACGGAAAAGATGACTAACACCAATCCACTAATACTCTGCCAGAAAAAAACTGGGCAAAAAGGGCGTGAAACTTATATGAGAAAAATTACGATTCCCATTCGGC
AAAACTATGTGAAATGTGTGCCACCGGTGAAGAGGTTGTCTGACGGTGAGTTTCGAACACGCCTCGACAAAGGTTTGTGCTTCCACTGCAATGAGAAGTATTCACCCACA
CATCATTGTAAGGGAAAGGGAAATTGGGAGTTGATGTTATTCATATTCAACGAGGATGAAGAAATAGACGATGTGGAAGAAGCCGAAGAAGTTGAAGTTGAAACATTGGA
ATTAAAAAGGATCAAAATCACAAAAGAAACAAAAATCCCACTTCACACCATCAATGGGTTTCCCGAAAAGGGGACTATTAAGCTAAAGGGTGGAATTAACGGCAAAGAGG
TTGTTATATTAATCAATATTGGAGCGTCAAATAATTTCATACACCAGAAATTAGTAGAGGAATTGAATTTGAAGGTAATGGAAGGAACAAAATTTGAAGTTACAATAGGA
GATGACACTTAA
Protein sequenceShow/hide protein sequence
MRKTQLVNDRNLALKLATAKSRSLKSGNNMGQTNRTLGGTEKMTNTNPLILCQKKTGQKGRETYMRKITIPIRQNYVKCVPPVKRLSDGEFRTRLDKGLCFHCNEKYSPT
HHCKGKGNWELMLFIFNEDEEIDDVEEAEEVEVETLELKRIKITKETKIPLHTINGFPEKGTIKLKGGINGKEVVILINIGASNNFIHQKLVEELNLKVMEGTKFEVTIG
DDT