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PI0014590 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014590
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:15983601..15984235
RNA-Seq ExpressionPI0014590
SyntenyPI0014590
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031555.1 retrotransposon protein [Cucumis melo var. makuwa]8.6e-6064.8Show/hide
Query:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---
        M++S+RAP+H WTREE+ TLVECL+ELVS GGWKS+NGTFRPGY+A ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ I EMRGP CSGFGWNDE   
Subjt:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---

Query:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT
                     SH AAKGLLNK FPYYDEL+YVFG+DR TG+ AE+F DVGSN P GG++ F   D  N D P +Y+
Subjt:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT

KAA0032766.1 retrotransposon protein [Cucumis melo var. makuwa]8.6e-6064.8Show/hide
Query:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---
        M++S+RAP+H WTREE+ TLVECL+ELVS GGWKS+NGTFRPGY+A ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ I EMRGP CSGFGWNDE   
Subjt:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---

Query:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT
                     SH AAKGLLNK FPYYDEL+YVFG+DR TG+ AE+F DVGSN P GG++ F   D  N D P +Y+
Subjt:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT

KAA0038065.1 retrotransposon protein [Cucumis melo var. makuwa]8.6e-6064.8Show/hide
Query:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---
        M++S+RAP+H WTREE+ TLVECL+ELVS GGWKS+NGTFRPGY+A ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ I EMRGP CSGFGWNDE   
Subjt:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---

Query:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT
                     SH AAKGLLNK FPYYDEL+YVFG+DR TG+ AE+F DVGSN P GG++ F   D  N D P +Y+
Subjt:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT

KAA0044610.1 retrotransposon protein [Cucumis melo var. makuwa]8.6e-6064.8Show/hide
Query:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---
        M++S+RAP+H WTREE+ TLVECL+ELVS GGWKS+NGTFRPGY+A ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ I EMRGP CSGFGWNDE   
Subjt:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---

Query:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT
                     SH AAKGLLNK FPYYDEL+YVFG+DR TG+ AE+F DVGSN P GG++ F   D  N D P +Y+
Subjt:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT

TYJ96194.1 retrotransposon protein [Cucumis melo var. makuwa]8.6e-6064.8Show/hide
Query:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---
        M++S+RAP+H WTREE+ TLVECL+ELVS GGWKS+NGTFRPGY+A ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ I EMRGP CSGFGWNDE   
Subjt:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---

Query:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT
                     SH AAKGLLNK FPYYDEL+YVFG+DR TG+ AE+F DVGSN P GG++ F   D  N D P +Y+
Subjt:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT

TrEMBL top hitse value%identityAlignment
A0A5A7SRU1 Retrotransposon protein4.1e-6064.8Show/hide
Query:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---
        M++S+RAP+H WTREE+ TLVECL+ELVS GGWKS+NGTFRPGY+A ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ I EMRGP CSGFGWNDE   
Subjt:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---

Query:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT
                     SH AAKGLLNK FPYYDEL+YVFG+DR TG+ AE+F DVGSN P GG++ F   D  N D P +Y+
Subjt:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT

A0A5A7TRV1 Retrotransposon protein4.1e-6064.8Show/hide
Query:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---
        M++S+RAP+H WTREE+ TLVECL+ELVS GGWKS+NGTFRPGY+A ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ I EMRGP CSGFGWNDE   
Subjt:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---

Query:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT
                     SH AAKGLLNK FPYYDEL+YVFG+DR TG+ AE+F DVGSN P GG++ F   D  N D P +Y+
Subjt:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT

A0A5D3BCN9 Retrotransposon protein4.1e-6064.8Show/hide
Query:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---
        M++S+RAP+H WTREE+ TLVECL+ELVS GGWKS+NGTFRPGY+A ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ I EMRGP CSGFGWNDE   
Subjt:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---

Query:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT
                     SH AAKGLLNK FPYYDEL+YVFG+DR TG+ AE+F DVGSN P GG++ F   D  N D P +Y+
Subjt:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT

A0A5D3CWL2 Retrotransposon protein4.1e-6064.8Show/hide
Query:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---
        M++S+RAP+H WTREE+ TLVECL+ELVS GGWKS+NGTFRPGY+A ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ I EMRGP CSGFGWNDE   
Subjt:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---

Query:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT
                     SH AAKGLLNK FPYYDEL+YVFG+DR TG+ AE+F DVGSN P GG++ F   D  N D P +Y+
Subjt:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT

A0A5D3DCZ1 Retrotransposon protein4.1e-6064.8Show/hide
Query:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---
        M++S+RAP+H WTREE+ TLVECL+ELVS GGWKS+NGTFRPGY+A ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ I EMRGP CSGFGWNDE   
Subjt:  MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDE---

Query:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT
                     SH AAKGLLNK FPYYDEL+YVFG+DR TG+ AE+F DVGSN P GG++ F   D  N D P +Y+
Subjt:  -------------SHLAAKGLLNKLFPYYDELSYVFGKDRTTGQRAESFIDVGSNVP-GGFEPFAGDDVSNMDIPCMYT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCGTCGAGGGCCCCGAAGCATACATGGACCAGAGAAGAAAAGTCAACCCTCGTGGAATGTTTGGTGGAGTTGGTATCCGCGGGAGGATGGAAATCGAACAA
CGGCACATTCCGACCCGGTTACATGGCAATGATTCTGCGAATGATGATGGAAAAGCTCCCAGGGTGTACCATCCAGGGGACCACTACTATTGATTGTCGGATCAAGACGC
TTAAAAGAACCTTTCAAACTATATTAGAGATGCGGGGCCCTACCTGCAGTGGATTCGGTTGGAATGACGAGAGTCACCTCGCAGCAAAGGGTCTTTTGAACAAGCTGTTT
CCATACTATGACGAACTGTCCTATGTCTTCGGGAAAGACCGCACTACGGGACAACGTGCAGAATCATTCATAGATGTCGGTTCCAATGTGCCAGGTGGTTTTGAGCCATT
TGCAGGTGACGATGTTTCGAATATGGACATCCCATGCATGTACACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCGTCGAGGGCCCCGAAGCATACATGGACCAGAGAAGAAAAGTCAACCCTCGTGGAATGTTTGGTGGAGTTGGTATCCGCGGGAGGATGGAAATCGAACAA
CGGCACATTCCGACCCGGTTACATGGCAATGATTCTGCGAATGATGATGGAAAAGCTCCCAGGGTGTACCATCCAGGGGACCACTACTATTGATTGTCGGATCAAGACGC
TTAAAAGAACCTTTCAAACTATATTAGAGATGCGGGGCCCTACCTGCAGTGGATTCGGTTGGAATGACGAGAGTCACCTCGCAGCAAAGGGTCTTTTGAACAAGCTGTTT
CCATACTATGACGAACTGTCCTATGTCTTCGGGAAAGACCGCACTACGGGACAACGTGCAGAATCATTCATAGATGTCGGTTCCAATGTGCCAGGTGGTTTTGAGCCATT
TGCAGGTGACGATGTTTCGAATATGGACATCCCATGCATGTACACCTAG
Protein sequenceShow/hide protein sequence
MASSSRAPKHTWTREEKSTLVECLVELVSAGGWKSNNGTFRPGYMAMILRMMMEKLPGCTIQGTTTIDCRIKTLKRTFQTILEMRGPTCSGFGWNDESHLAAKGLLNKLF
PYYDELSYVFGKDRTTGQRAESFIDVGSNVPGGFEPFAGDDVSNMDIPCMYT