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PI0014595 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014595
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionEndoribonuclease Dicer-3a-like protein
Genome locationchr11:25024488..25025052
RNA-Seq ExpressionPI0014595
SyntenyPI0014595
Gene Ontology termsGO:0010216 - maintenance of DNA methylation (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0051214 - RNA virus induced gene silencing (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064701.1 endoribonuclease Dicer-like protein 3 [Cucumis melo var. makuwa]5.6e-5188.79Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSSSF+CECQIADLESILDSQVYAIE KK+VE+YVPSAKE CIFY+PAKPQTMEL+ KIEA+W KF+A LSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAYE
        KITYCLDELG+MCAYE
Subjt:  KITYCLDELGVMCAYE

XP_008445598.1 PREDICTED: endoribonuclease Dicer homolog 3 [Cucumis melo]7.3e-5188.79Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSSSFDCECQIADLESILDSQVYAIE KK+VE+YVPSAKE CIFY+PAKPQT EL+ KIEA+W KF+A LSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAYE
        KITYCLDELG+MCAYE
Subjt:  KITYCLDELGVMCAYE

XP_011657366.2 endoribonuclease Dicer homolog 3 isoform X1 [Cucumis sativus]4.7e-5087.93Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSSS DCECQIADLESILD+QVYAIE KK+VE+YVPSAKE CIFY+PA PQTMELK KIEA+W KF+A LSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAYE
        KITYCLDELG+MCAYE
Subjt:  KITYCLDELGVMCAYE

XP_038885573.1 endoribonuclease Dicer homolog 3 isoform X1 [Benincasa hispida]1.6e-5087.07Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSSSFDCECQIADLESILDSQ+YAIE KK+VE+YVPSAKE CIFY+PAKPQT+ELK KIEA+WS+F+A+LSNS+ AMQGHYKDVDSKLKALKKRLS+DHL
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAYE
        KITYCLDELGVMCAYE
Subjt:  KITYCLDELGVMCAYE

XP_038885574.1 endoribonuclease Dicer homolog 3a isoform X2 [Benincasa hispida]1.6e-5087.07Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSSSFDCECQIADLESILDSQ+YAIE KK+VE+YVPSAKE CIFY+PAKPQT+ELK KIEA+WS+F+A+LSNS+ AMQGHYKDVDSKLKALKKRLS+DHL
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAYE
        KITYCLDELGVMCAYE
Subjt:  KITYCLDELGVMCAYE

TrEMBL top hitse value%identityAlignment
A0A0A0KD17 Uncharacterized protein2.3e-5087.93Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSSS DCECQIADLESILD+QVYAIE KK+VE+YVPSAKE CIFY+PA PQTMELK KIEA+W KF+A LSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAYE
        KITYCLDELG+MCAYE
Subjt:  KITYCLDELGVMCAYE

A0A1S3BDT0 endoribonuclease Dicer homolog 33.5e-5188.79Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSSSFDCECQIADLESILDSQVYAIE KK+VE+YVPSAKE CIFY+PAKPQT EL+ KIEA+W KF+A LSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAYE
        KITYCLDELG+MCAYE
Subjt:  KITYCLDELGVMCAYE

A0A5A7VG67 Endoribonuclease Dicer-like protein 32.7e-5188.79Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSSSF+CECQIADLESILDSQVYAIE KK+VE+YVPSAKE CIFY+PAKPQTMEL+ KIEA+W KF+A LSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAYE
        KITYCLDELG+MCAYE
Subjt:  KITYCLDELGVMCAYE

A0A6J1BR19 endoribonuclease Dicer homolog 3a isoform X22.2e-4580.17Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSSS DCECQIADLESI+DSQ+YAIE KK+VE+YVPSAKE CIFY+PAK  +MELK KIEA+W KF+A+LSNSQ A+Q HYKDVDSKLK LKKRLSSDHL
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAYE
        KI+YCLDELG++CAYE
Subjt:  KITYCLDELGVMCAYE

A0A6J1BR97 endoribonuclease Dicer homolog 3a isoform X12.2e-4580.17Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSSS DCECQIADLESI+DSQ+YAIE KK+VE+YVPSAKE CIFY+PAK  +MELK KIEA+W KF+A+LSNSQ A+Q HYKDVDSKLK LKKRLSSDHL
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAYE
        KI+YCLDELG++CAYE
Subjt:  KITYCLDELGVMCAYE

SwissProt top hitse value%identityAlignment
Q5N870 Endoribonuclease Dicer homolog 3a9.0e-2041.88Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTME-LKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDH
        +SS  DCE Q  +LE++LD+++Y +  ++++E  VPSAKE C +YD +KP   E L E++  + SK++A+++  Q      YKD D   K  K+RLS   
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTME-LKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDH

Query:  LKITYCLDELGVMCAYE
         KI YCLD++G++CA E
Subjt:  LKITYCLDELGVMCAYE

Q7XD96 Endoribonuclease Dicer homolog 3b2.2e-1031.67Show/hide
Query:  TLDVSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSS
        T   S+  +CE  I+ LE  LD+++Y +E + ++E + P       +YD        LK K++    +F+++L   QE+    +KD D+ L+  +K LS 
Subjt:  TLDVSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSS

Query:  DHLKITYCLDELGVMCAYEV
         H KI Y L++LG +   EV
Subjt:  DHLKITYCLDELGVMCAYEV

Q8LMR2 Endoribonuclease Dicer homolog 18.2e-0533.83Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKF-NAILSNSQE-------AMQGHYKDVDSKLKALK
        V+S  DC  +I +LES LDS V  I+ +K++E +VP   E  + YD A      L E+I+ M S    A LS+S+        A     +D    +  + 
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKF-NAILSNSQE-------AMQGHYKDVDSKLKALK

Query:  KRLSSDHL--------KITYCLDELGVMCAYEV
        +R  SD           I Y L ELG  CAY+V
Subjt:  KRLSSDHL--------KITYCLDELGVMCAYEV

Q9LXW7 Endoribonuclease Dicer homolog 33.5e-1637.39Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSS  +   Q+++LE ++DS+++  E ++ VE +  + KE  I Y+P+   ++ELKEK+E    KF+A L   QE  +  + ++D+K +  +KRLS D+ 
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAY
        +I +CLD LG++CA+
Subjt:  KITYCLDELGVMCAY

Q9SP32 Endoribonuclease Dicer homolog 11.4e-0431.82Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTM---ELKEKIEAMWSKFNAILSNSQEAMQG----HYKDVDSKLKALKK
        VSS  DC  +I +LE+ LDS V  I+ +K++E +VP   E  + YD A         +K+ I A+     A    S+    G      KD   ++  + +
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTM---ELKEKIEAMWSKFNAILSNSQEAMQG----HYKDVDSKLKALKK

Query:  RLSSDHL--------KITYCLDELGVMCAYEV
        R  SD           I Y L ELG  CAY+V
Subjt:  RLSSDHL--------KITYCLDELGVMCAYEV

Arabidopsis top hitse value%identityAlignment
AT1G01040.1 dicer-like 19.9e-0631.82Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTM---ELKEKIEAMWSKFNAILSNSQEAMQG----HYKDVDSKLKALKK
        VSS  DC  +I +LE+ LDS V  I+ +K++E +VP   E  + YD A         +K+ I A+     A    S+    G      KD   ++  + +
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTM---ELKEKIEAMWSKFNAILSNSQEAMQG----HYKDVDSKLKALKK

Query:  RLSSDHL--------KITYCLDELGVMCAYEV
        R  SD           I Y L ELG  CAY+V
Subjt:  RLSSDHL--------KITYCLDELGVMCAYEV

AT1G01040.2 dicer-like 19.9e-0631.82Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTM---ELKEKIEAMWSKFNAILSNSQEAMQG----HYKDVDSKLKALKK
        VSS  DC  +I +LE+ LDS V  I+ +K++E +VP   E  + YD A         +K+ I A+     A    S+    G      KD   ++  + +
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTM---ELKEKIEAMWSKFNAILSNSQEAMQG----HYKDVDSKLKALKK

Query:  RLSSDHL--------KITYCLDELGVMCAYEV
        R  SD           I Y L ELG  CAY+V
Subjt:  RLSSDHL--------KITYCLDELGVMCAYEV

AT3G43920.1 dicer-like 36.4e-1336.84Show/hide
Query:  QVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCLDELGVMCAY
        +++  E ++ VE +  + KE  I Y+P+   ++ELKEK+E    KF+A L   QE  +  + ++D+K +  +KRLS D+ +I +CLD LG++CA+
Subjt:  QVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCLDELGVMCAY

AT3G43920.2 dicer-like 32.5e-1737.39Show/hide
Query:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL
        VSS  +   Q+++LE ++DS+++  E ++ VE +  + KE  I Y+P+   ++ELKEK+E    KF+A L   QE  +  + ++D+K +  +KRLS D+ 
Subjt:  VSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHL

Query:  KITYCLDELGVMCAY
        +I +CLD LG++CA+
Subjt:  KITYCLDELGVMCAY

AT3G43920.3 dicer-like 39.5e-1737.04Show/hide
Query:  ECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCLD
        + Q+++LE ++DS+++  E ++ VE +  + KE  I Y+P+   ++ELKEK+E    KF+A L   QE  +  + ++D+K +  +KRLS D+ +I +CLD
Subjt:  ECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCLD

Query:  ELGVMCAY
         LG++CA+
Subjt:  ELGVMCAY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCATCCTACATTAGATGTTTCCTCTTCCTTCGATTGTGAATGCCAAATAGCAGACCTCGAAAGTATCTTGGATTCTCAGGTTTATGCTATTGAATATAAGAAAAA
AGTGGAAGTATATGTTCCTTCCGCAAAGGAAAGTTGCATATTTTATGATCCAGCTAAGCCTCAAACTATGGAGTTAAAGGAAAAGATAGAAGCCATGTGGTCCAAGTTTA
ATGCAATATTGTCAAACTCACAAGAGGCGATGCAAGGTCACTATAAAGATGTAGATAGTAAGCTTAAGGCACTAAAAAAACGACTGTCTAGTGATCATTTAAAGATCACT
TATTGCCTTGATGAACTTGGTGTTATGTGTGCTTATGAGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATCATCCTACATTAGATGTTTCCTCTTCCTTCGATTGTGAATGCCAAATAGCAGACCTCGAAAGTATCTTGGATTCTCAGGTTTATGCTATTGAATATAAGAAAAA
AGTGGAAGTATATGTTCCTTCCGCAAAGGAAAGTTGCATATTTTATGATCCAGCTAAGCCTCAAACTATGGAGTTAAAGGAAAAGATAGAAGCCATGTGGTCCAAGTTTA
ATGCAATATTGTCAAACTCACAAGAGGCGATGCAAGGTCACTATAAAGATGTAGATAGTAAGCTTAAGGCACTAAAAAAACGACTGTCTAGTGATCATTTAAAGATCACT
TATTGCCTTGATGAACTTGGTGTTATGTGTGCTTATGAGGTATGA
Protein sequenceShow/hide protein sequence
MYHPTLDVSSSFDCECQIADLESILDSQVYAIEYKKKVEVYVPSAKESCIFYDPAKPQTMELKEKIEAMWSKFNAILSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKIT
YCLDELGVMCAYEV