; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014610 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014610
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr08:4981964..4984905
RNA-Seq ExpressionPI0014610
SyntenyPI0014610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]1.8e-3346.7Show/hide
Query:  GSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT----NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASN
        GSP+P RAL+SQVLLGLDE YN VI  IQ +P +SWLDMQS+LL +E+ L  QN+Q+      NI  + ++NM   R    GQ+   + +  G  R   +
Subjt:  GSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT----NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASN

Query:  GQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDY
        GQ G    G     PTCQ+CGK GH+A VCYN+FNKEF  PL      R  H+ N     N A  ++TQN TPF     V  D +WY+DSGA+NH+T + 
Subjt:  GQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDY

Query:  NNIQNPIDYSGK
        +N+ NP +YSG+
Subjt:  NNIQNPIDYSGK

TYK05754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.7e-3644.75Show/hide
Query:  AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNTNINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCG
        AGSP+P+RA +SQ LLGLDE YNPVIA IQ +P +SW+DMQSELL++E+RL  Q++Q+NT       VN+   R +S  +K      +   R+ S GQ G
Subjt:  AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNTNINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCG

Query:  ------GRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITT
              GRG+GRG+ +PTCQVC K GH+A VCYN+FNKEF  PL   +        +NF+  ++  ++ T  +     + +   + +WY+DSGA+NH+T 
Subjt:  ------GRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITT

Query:  DYNNIQNPIDYSGKEFVTV
        +Y+N+ NP +YSG E + V
Subjt:  DYNNIQNPIDYSGKEFVTV

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]1.6e-2945.93Show/hide
Query:  RALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQ-RNT-NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGR
        R ++     GLDE YN VI  IQ +P +SWLDMQS+LL +E+RL  QN+Q +NT NI  + ++NM   R    GQ+ Q + +  G  R   +GQ G    
Subjt:  RALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQ-RNT-NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGR

Query:  GRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDYNNIQNPID
        G     PTCQ+CGK GH+A VCYN+FNKEF  PL      R  H+ N     N A  ++TQN TPF     V  D +WY+DSGA+NH+T + +N+ NP +
Subjt:  GRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDYNNIQNPID

Query:  YSGKEFVTV
        YSG E VTV
Subjt:  YSGKEFVTV

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]5.4e-3848.58Show/hide
Query:  AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT---NINNTTSVNMVNGRGNSGGQKTQPSHQN-NGGRSASN
        AGSP+P R LVSQVLLGLDE+YN ++A IQ R  +SWLDMQSELL YE+RL  Q++Q+ T   N  +  SVNM N R  +   KT  S+Q+  GG+    
Subjt:  AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT---NINNTTSVNMVNGRGNSGGQKTQPSHQN-NGGRSASN

Query:  GQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNG--KNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTD
        G   GRGRGR + +P CQVCGK+GH A  C+N+++++F P N+ Q+K E    N       +  A+     + PF    E   D +WY DSGASNH+T+D
Subjt:  GQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNG--KNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTD

Query:  YNNIQNPIDYSG
        +NN+ NPI+YSG
Subjt:  YNNIQNPIDYSG

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]1.1e-3847.93Show/hide
Query:  AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT---NINNTTSVNMVNGRGNSGGQKTQPSHQN-NGGRSASN
        AGSP+P R LVSQVLLGLDE+YN ++A IQ R  +SWLDMQSELL YE+RL  Q++Q+ T   N  +  SVNM N R  +   KT  S+Q+  GG+    
Subjt:  AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT---NINNTTSVNMVNGRGNSGGQKTQPSHQN-NGGRSASN

Query:  GQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNG--KNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTD
        G   GRGRGR + +P CQVCGK+GH A  C+N+++++F P N+ Q+K E    N       +  A+     + PF    E   D +WY DSGASNH+T+D
Subjt:  GQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNG--KNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTD

Query:  YNNIQNPIDYSGKEFVT
        +NN+ NPI+YSG+ + T
Subjt:  YNNIQNPIDYSGKEFVT

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X17.6e-3045.93Show/hide
Query:  RALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQ-RNT-NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGR
        R ++     GLDE YN VI  IQ +P +SWLDMQS+LL +E+RL  QN+Q +NT NI  + ++NM   R    GQ+ Q + +  G  R   +GQ G    
Subjt:  RALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQ-RNT-NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGR

Query:  GRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDYNNIQNPID
        G     PTCQ+CGK GH+A VCYN+FNKEF  PL      R  H+ N     N A  ++TQN TPF     V  D +WY+DSGA+NH+T + +N+ NP +
Subjt:  GRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDYNNIQNPID

Query:  YSGKEFVTV
        YSG E VTV
Subjt:  YSGKEFVTV

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X31.4e-2845.1Show/hide
Query:  RALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQ-RNT-NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGR
        R ++     GLDE YN VI  IQ +P +SWLDMQS+LL +E+RL  QN+Q +NT NI  + ++NM   R    GQ+ Q + +  G  R   +GQ G    
Subjt:  RALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQ-RNT-NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASNGQCGGRGR

Query:  GRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDYNNIQNPID
        G     PTCQ+CGK GH+A VCYN+FNKEF  PL      R  H+ N     N A  ++TQN TPF     V  D +WY+DSGA+NH+T + +N+ NP +
Subjt:  GRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDYNNIQNPID

Query:  YSGK
        YSG+
Subjt:  YSGK

A0A5A7SIT7 Uncharacterized protein8.7e-3446.7Show/hide
Query:  GSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT----NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASN
        GSP+P RAL+SQVLLGLDE YN VI  IQ +P +SWLDMQS+LL +E+ L  QN+Q+      NI  + ++NM   R    GQ+   + +  G  R   +
Subjt:  GSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNT----NINNTTSVNMVNGRGNSGGQKTQPSHQNNG-GRSASN

Query:  GQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDY
        GQ G    G     PTCQ+CGK GH+A VCYN+FNKEF  PL      R  H+ N     N A  ++TQN TPF     V  D +WY+DSGA+NH+T + 
Subjt:  GQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDY

Query:  NNIQNPIDYSGK
        +N+ NP +YSG+
Subjt:  NNIQNPIDYSGK

A0A5D3BWB6 Putative Ty1-copia-like retrotransposon3.2e-2850Show/hide
Query:  AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNTNINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCG
        A S +P R L+SQVLLGL E+YN V+AT+Q +P +S + MQSELL YE+RL  QN+ +   + NT +VNMV+ RG S     +   + N   + + G  G
Subjt:  AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNTNINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCG

Query:  GRG--RGRGHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKN
        G+   RGRG YRPTCQVCGKIG+  DVCYN+FNKEF P NN  +  +  N N+F   N
Subjt:  GRG--RGRGHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKN

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-948.4e-3744.75Show/hide
Query:  AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNTNINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCG
        AGSP+P+RA +SQ LLGLDE YNPVIA IQ +P +SW+DMQSELL++E+RL  Q++Q+NT       VN+   R +S  +K      +   R+ S GQ G
Subjt:  AGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNTNINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCG

Query:  ------GRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITT
              GRG+GRG+ +PTCQVC K GH+A VCYN+FNKEF  PL   +        +NF+  ++  ++ T  +     + +   + +WY+DSGA+NH+T 
Subjt:  ------GRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEF-GPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITT

Query:  DYNNIQNPIDYSGKEFVTV
        +Y+N+ NP +YSG E + V
Subjt:  DYNNIQNPIDYSGKEFVTV

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.3e-0626.96Show/hide
Query:  MAGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWL-DMQSELLSYEQRL----------------NFQNSQRNTNINNTTSVNMVNGRGNSGGQKT
        + G P+     V +VL  L E+Y PVI  I A+ T   L ++   LL++E ++                + +N+    N NN    N  + R N+   K 
Subjt:  MAGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWL-DMQSELLSYEQRL----------------NFQNSQRNTNINNTTSVNMVNGRGNSGGQKT

Query:  QPSHQNNGGRSASNGQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWY
         P  Q++     +N Q          Y   CQ+CG  GH+A  C +Q       +N+QQ        + F      A +A    +P++++       +W 
Subjt:  QPSHQNNGGRSASNGQCGGRGRGRGHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWY

Query:  VDSGASNHITTDYNNIQNPIDYSGKEFVTV
        +DSGA++HIT+D+NN+     Y+G + V V
Subjt:  VDSGASNHITTDYNNIQNPIDYSGKEFVTV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.2e-0528.77Show/hide
Query:  MAGSPIPERALVSQVLLGLDEDYNPVIATIQARPT-VSWLDMQSELLSYEQRLNFQNSQRNTNIN-NTTSVNMVNGRGNSGGQKTQPSHQNNGGRSAS--
        + G P+     V +VL  L +DY PVI  I A+ T  S  ++   L++ E +L   NS     I  N  +    N   N   +    ++ NN  RS S  
Subjt:  MAGSPIPERALVSQVLLGLDEDYNPVIATIQARPT-VSWLDMQSELLSYEQRLNFQNSQRNTNIN-NTTSVNMVNGRGNSGGQKTQPSHQNNGGRSAS--

Query:  NGQCGGRGRGR--GHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITT
            G R   R    Y   CQ+C   GH+A  C      +F    NQQ      + + F      A +A   N+P+  +       +W +DSGA++HIT+
Subjt:  NGQCGGRGRGR--GHYRPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITT

Query:  DYNNIQNPIDYSGKEFVTV
        D+NN+     Y+G + V +
Subjt:  DYNNIQNPIDYSGKEFVTV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGAAGTCCTATTCCAGAAAGAGCTCTTGTTTCCCAAGTTCTTTTAGGACTTGACGAAGATTACAATCCAGTGATAGCAACCATTCAAGCCAGGCCAACAGTCTC
GTGGTTAGATATGCAGTCTGAACTGCTGTCATATGAACAGAGACTCAACTTTCAGAATTCCCAGAGAAATACAAATATTAACAATACTACTTCAGTCAATATGGTTAATG
GAAGAGGAAATAGTGGTGGTCAGAAAACGCAGCCTTCACACCAAAATAATGGTGGTCGGTCAGCATCTAATGGTCAATGTGGGGGCAGAGGCCGTGGAAGAGGACACTAT
CGTCCAACTTGTCAGGTATGTGGAAAAATAGGACATACCGCAGATGTGTGCTACAATCAATTCAATAAGGAATTCGGTCCTCTTAACAATCAACAACATAAAAGGGAGAA
TCATAATGGAAATAACTTCAATGGCAAAAACTCTGCTGCAATGATGGCAACTCAAAACAACACTCCGTTCACAAATAGCATTGAAGTTAATCCTGATCAAAGTTGGTATG
TTGATAGTGGGGCCTCAAATCACATCACAACTGATTACAACAATATTCAGAACCCAATTGACTACTCAGGTAAAGAATTTGTTACAGTAGAGTACGTCATGGATGAGATT
CAACGATGCTCTGAGAAATTATCTCTGATTGAAAAAGAAAGCTTACCATTGGTCATTGAGGAATCTAAGTTTCAGTTGGATATTGCTCACTTACGTCTATGTGTGGCGGC
CAAAATCCTCTCTACAAAGCGAGCTAACATTGAAGCTTTCTACTCAGTTTTGAAAACGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGAAGTCCTATTCCAGAAAGAGCTCTTGTTTCCCAAGTTCTTTTAGGACTTGACGAAGATTACAATCCAGTGATAGCAACCATTCAAGCCAGGCCAACAGTCTC
GTGGTTAGATATGCAGTCTGAACTGCTGTCATATGAACAGAGACTCAACTTTCAGAATTCCCAGAGAAATACAAATATTAACAATACTACTTCAGTCAATATGGTTAATG
GAAGAGGAAATAGTGGTGGTCAGAAAACGCAGCCTTCACACCAAAATAATGGTGGTCGGTCAGCATCTAATGGTCAATGTGGGGGCAGAGGCCGTGGAAGAGGACACTAT
CGTCCAACTTGTCAGGTATGTGGAAAAATAGGACATACCGCAGATGTGTGCTACAATCAATTCAATAAGGAATTCGGTCCTCTTAACAATCAACAACATAAAAGGGAGAA
TCATAATGGAAATAACTTCAATGGCAAAAACTCTGCTGCAATGATGGCAACTCAAAACAACACTCCGTTCACAAATAGCATTGAAGTTAATCCTGATCAAAGTTGGTATG
TTGATAGTGGGGCCTCAAATCACATCACAACTGATTACAACAATATTCAGAACCCAATTGACTACTCAGGTAAAGAATTTGTTACAGTAGAGTACGTCATGGATGAGATT
CAACGATGCTCTGAGAAATTATCTCTGATTGAAAAAGAAAGCTTACCATTGGTCATTGAGGAATCTAAGTTTCAGTTGGATATTGCTCACTTACGTCTATGTGTGGCGGC
CAAAATCCTCTCTACAAAGCGAGCTAACATTGAAGCTTTCTACTCAGTTTTGAAAACGATTTGA
Protein sequenceShow/hide protein sequence
MAGSPIPERALVSQVLLGLDEDYNPVIATIQARPTVSWLDMQSELLSYEQRLNFQNSQRNTNINNTTSVNMVNGRGNSGGQKTQPSHQNNGGRSASNGQCGGRGRGRGHY
RPTCQVCGKIGHTADVCYNQFNKEFGPLNNQQHKRENHNGNNFNGKNSAAMMATQNNTPFTNSIEVNPDQSWYVDSGASNHITTDYNNIQNPIDYSGKEFVTVEYVMDEI
QRCSEKLSLIEKESLPLVIEESKFQLDIAHLRLCVAAKILSTKRANIEAFYSVLKTI