; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014614 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014614
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr09:12870087..12871546
RNA-Seq ExpressionPI0014614
SyntenyPI0014614
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]8.5e-6470.11Show/hide
Query:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KVTKCGVC L+GHPNDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         EMKQQM+QLT AISK++GKGKLPAQPD+ANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S  + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

KAA0038454.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.7e-6269.57Show/hide
Query:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KVTKCGVC L+GH NDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT SFQ
Subjt:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         EMKQQM+QLT AISK++GKGKLPAQPDHANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S  + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-6268.48Show/hide
Query:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KVTKCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         EMKQQM+QLT  ISK++GKGKL AQPDHANVS ISLRS KIL  P + E+KV S P  L  +N+ KEE  E N S  + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]2.5e-6369.02Show/hide
Query:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KVTKCGVCGL+G+PNDKCP ++E+ N++R+YDP GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         +MKQQM+QLT  ISK++GKGKLPAQPDH NVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N+SS + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]1.2e-6268.48Show/hide
Query:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KVTKCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         EMKQQM+QLT  ISK++GKGKL AQPDHANVS ISLRS KIL  P + E+KV S P  L  +N+ KEE  E N S  + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032911.2e-6369.02Show/hide
Query:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KVTKCGVCGL+G+PNDKCP ++E+ N++R+YDP GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         +MKQQM+QLT  ISK++GKGKLPAQPDH NVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N+SS + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

A0A1S4E3R2 uncharacterized protein LOC1079919105.9e-6368.48Show/hide
Query:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KVTKCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         EMKQQM+QLT  ISK++GKGKL AQPDHANVS ISLRS KIL  P + E+KV S P  L  +N+ KEE  E N S  + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

A0A5A7T4R3 Retrotransposon gag protein1.3e-6269.57Show/hide
Query:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KVTKCGVC L+GH NDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT SFQ
Subjt:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         EMKQQM+QLT AISK++GKGKLPAQPDHANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S  + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

A0A5D3DCG3 Retrotransposon gag protein5.9e-6368.48Show/hide
Query:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ
        MT LLTSFVQG  +KVTKCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         EMKQQM+QLT  ISK++GKGKL AQPDHANVS ISLRS KIL  P + E+KV S P  L  +N+ KEE  E N S  + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

E5GBZ4 Retrotransposon gag protein4.1e-6470.11Show/hide
Query:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KVTKCGVC L+GHPNDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR
         EMKQQM+QLT AISK++GKGKLPAQPD+ANVSAISLRSGKIL  P + E+KV S    L  +N+ KEE  E N S  + K  +
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPS-EEKVPSNPDLLIDENKKKEENKENNASSPSLKGTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTCTACTAACCTCTTTTGTGCAAGGTGGAAATGTGAAAGTTACCAAATGTGGAGTATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGA
AGAGGCAAATGTCATTAGGAAGTACGATCCCCAAGGAAATACTTACAACGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACACAAG
CAACTCCTACTTCAAACAATCAAGGTACAAATTTGGAGGATTTGGTAAAAGCTCTTGCTACTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTA
ACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCC
AAGTGAAGAAAAGGTACCATCTAACCCTGACCTTCTAATTGATGAAAACAAGAAAAAGGAAGAAAATAAAGAAAACAATGCCTCTTCTCCTTCTTTAAAAGGAACCAGGG
ATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACTCTACTAACCTCTTTTGTGCAAGGTGGAAATGTGAAAGTTACCAAATGTGGAGTATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGA
AGAGGCAAATGTCATTAGGAAGTACGATCCCCAAGGAAATACTTACAACGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACACAAG
CAACTCCTACTTCAAACAATCAAGGTACAAATTTGGAGGATTTGGTAAAAGCTCTTGCTACTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTA
ACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCC
AAGTGAAGAAAAGGTACCATCTAACCCTGACCTTCTAATTGATGAAAACAAGAAAAAGGAAGAAAATAAAGAAAACAATGCCTCTTCTCCTTCTTTAAAAGGAACCAGGG
ATTGA
Protein sequenceShow/hide protein sequence
MTTLLTSFVQGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNAGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
TNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEKVPSNPDLLIDENKKKEENKENNASSPSLKGTRD