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PI0014621 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014621
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionextensin-like
Genome locationchr03:9966185..9966811
RNA-Seq ExpressionPI0014621
SyntenyPI0014621
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058916.1 hypothetical protein E6C27_scaffold98G00840 [Cucumis melo var. makuwa]2.5e-7278.33Show/hide
Query:  MSSSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAPVVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCD-HDN-NNPQHPDDRPQGILS
        MSSSKFPPS EGTK  LQISNNSR IKKPPLP KRA PVVKYE EPR+I VQTPTDF YIVQLLTGDP RPPP+YPCNCD HDN NNPQ PDD PQGILS
Subjt:  MSSSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAPVVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCD-HDN-NNPQHPDDRPQGILS

Query:  PTPTSLPPLVSSTDFTPLPSPLSPSFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVPPSPFRMLNTQIPPSFNTHLAPMLF
        P PTSL PLVS  DFTP PS    SFDQDFN FD L++L  EPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRV PS +    T+IPPSF T   PM F
Subjt:  PTPTSLPPLVSSTDFTPLPSPLSPSFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVPPSPFRMLNTQIPPSFNTHLAPMLF

Query:  PPN
        PPN
Subjt:  PPN

KAE8647157.1 hypothetical protein Csa_018820, partial [Cucumis sativus]3.1e-1441.62Show/hide
Query:  PSDEGTKQGLQISNNSRKIKKPPLPKKRAAPVV--KYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCDHDNNNPQHPDDRPQGILSPTPTSLP
        P  EG KQ LQIS +S+ IKKPPL     APV+  KYE +P++I V+T  DFTYIVQLLTGDP  PPP+YPCNC     +           LSP P    
Subjt:  PSDEGTKQGLQISNNSRKIKKPPLPKKRAAPVV--KYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCDHDNNNPQHPDDRPQGILSPTPTSLP

Query:  PLVSSTDFTPLPSPLSPSFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVPPSPF
              DFTP                         PP L   P    ++P   PPPS      P F+VPPSPF
Subjt:  PLVSSTDFTPLPSPLSPSFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVPPSPF

KAG6602166.1 hypothetical protein SDJN03_07399, partial [Cucurbita argyrosperma subsp. sororia]3.6e-1040.83Show/hide
Query:  SSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAP---VVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCDHDNNNPQHPDDRPQGILSP
        SS F P ++  +Q LQIS  SR I KPPLP   A P   ++KY+ +P++I V+TP +F YIVQLLTG P  PP                PD     +LSP
Subjt:  SSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAP---VVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCDHDNNNPQHPDDRPQGILSP

Query:  TPTSLPPLVSSTDFTPLPSP
         P   PP     D + L  P
Subjt:  TPTSLPPLVSSTDFTPLPSP

XP_022959600.1 extensin-like [Cucurbita moschata]3.2e-1144.76Show/hide
Query:  SSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAP---VVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPP---LYPCNCDHDNNNPQHPDDRPQGI
        SS F P ++  +Q LQIS  SR IKKPPLP   A P   ++KY+ +P++I V+TP +F YIVQLLTG P  PPP     P        +P  PD   + +
Subjt:  SSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAP---VVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPP---LYPCNCDHDNNNPQHPDDRPQGI

Query:  LSPTP
        L+P P
Subjt:  LSPTP

XP_038885909.1 extensin-like [Benincasa hispida]1.9e-5162.1Show/hide
Query:  MSSSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRA-----APVVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNC-DHDNNNPQHPDDRPQ
        MSSS  PP  EG K+  QISNNSRKIKKPP P K A     +PVV+YE+EP++IKV+TP DF YIVQLLTGDP RPPP YPC   DHD   PQ PDDRPQ
Subjt:  MSSSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRA-----APVVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNC-DHDNNNPQHPDDRPQ

Query:  GILSPTPTSLPPLVSSTDFTPLPSPLSP--------SFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPV-PQPIFRVPPSPFRMLNTQI
        GILSPTPTSLP LV    FTP PSP  P        S DQ+  +FD LE+   EP  LS  P V +    P PP  P PV P P FRVPPSPFR LNT+I
Subjt:  GILSPTPTSLPPLVSSTDFTPLPSPLSP--------SFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPV-PQPIFRVPPSPFRMLNTQI

Query:  PPSFNTHLAPMLFPPNHFP
        PPSFNT L P+ FPPNHFP
Subjt:  PPSFNTHLAPMLFPPNHFP

TrEMBL top hitse value%identityAlignment
A0A0A0KCP3 Uncharacterized protein7.3e-2544.5Show/hide
Query:  PSDEGTKQGLQISNNSRKIKKPPLPKKRAAPVV--KYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCDHDNNNPQHPDDRPQGILSPTPTSLP
        P  EG KQ LQIS +S+ IKKPPL     APV+  KYE +P++I V+T  DFTYIVQLLTGDP  PPP+YPCNC     +           LSP P    
Subjt:  PSDEGTKQGLQISNNSRKIKKPPLPKKRAAPVV--KYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCDHDNNNPQHPDDRPQGILSPTPTSLP

Query:  PLVSSTDFTPLPSPLSPSFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVPPSPFRMLNTQIPPSFNTHLAPMLFPPNHFPP
              DFTP                         PP L   P    ++P   PPPS      P F+VPPSPFR LNT+IPP FN+   P  +PPNHFPP
Subjt:  PLVSSTDFTPLPSPLSPSFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVPPSPFRMLNTQIPPSFNTHLAPMLFPPNHFPP

A0A5A7UXK4 Uncharacterized protein1.2e-7278.33Show/hide
Query:  MSSSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAPVVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCD-HDN-NNPQHPDDRPQGILS
        MSSSKFPPS EGTK  LQISNNSR IKKPPLP KRA PVVKYE EPR+I VQTPTDF YIVQLLTGDP RPPP+YPCNCD HDN NNPQ PDD PQGILS
Subjt:  MSSSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAPVVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCD-HDN-NNPQHPDDRPQGILS

Query:  PTPTSLPPLVSSTDFTPLPSPLSPSFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVPPSPFRMLNTQIPPSFNTHLAPMLF
        P PTSL PLVS  DFTP PS    SFDQDFN FD L++L  EPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRV PS +    T+IPPSF T   PM F
Subjt:  PTPTSLPPLVSSTDFTPLPSPLSPSFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVPPSPFRMLNTQIPPSFNTHLAPMLF

Query:  PPN
        PPN
Subjt:  PPN

A0A6J1H6R4 extensin-like1.6e-1144.76Show/hide
Query:  SSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAP---VVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPP---LYPCNCDHDNNNPQHPDDRPQGI
        SS F P ++  +Q LQIS  SR IKKPPLP   A P   ++KY+ +P++I V+TP +F YIVQLLTG P  PPP     P        +P  PD   + +
Subjt:  SSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAP---VVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPP---LYPCNCDHDNNNPQHPDDRPQGI

Query:  LSPTP
        L+P P
Subjt:  LSPTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTTCGAAATTTCCTCCAAGTGATGAGGGAACAAAACAAGGACTCCAAATCTCCAACAATTCCCGAAAGATCAAGAAGCCGCCACTGCCGAAGAAAAGGGCGGC
GCCGGTCGTAAAGTACGAGTCGGAGCCGAGGGTCATTAAAGTACAAACCCCCACAGACTTCACCTACATCGTCCAACTCCTAACCGGCGACCCCAAACGTCCACCTCCTT
TATACCCCTGTAATTGTGACCACGACAATAATAATCCTCAACACCCTGACGACCGCCCACAGGGAATTCTCTCCCCGACTCCCACCTCTCTTCCCCCTCTCGTTTCTTCC
ACTGATTTTACTCCCTTGCCCTCCCCTCTTTCCCCGTCCTTTGATCAAGATTTCAACCTTTTTGATTCGCTTGAAGATTTGCTAGAAGAACCACCCACATTATCTTTATC
TCCTCCTGTTATTAATATTTCTCCCTCACCTTCCCCTCCTCCCTCGCCTTTGCCAGTACCGCAACCCATTTTCAGAGTTCCTCCCTCCCCATTTCGTATGCTGAATACGC
AAATTCCGCCCAGTTTCAACACTCATCTGGCTCCTATGCTCTTCCCACCCAATCATTTTCCCCCACAACAACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCTTCGAAATTTCCTCCAAGTGATGAGGGAACAAAACAAGGACTCCAAATCTCCAACAATTCCCGAAAGATCAAGAAGCCGCCACTGCCGAAGAAAAGGGCGGC
GCCGGTCGTAAAGTACGAGTCGGAGCCGAGGGTCATTAAAGTACAAACCCCCACAGACTTCACCTACATCGTCCAACTCCTAACCGGCGACCCCAAACGTCCACCTCCTT
TATACCCCTGTAATTGTGACCACGACAATAATAATCCTCAACACCCTGACGACCGCCCACAGGGAATTCTCTCCCCGACTCCCACCTCTCTTCCCCCTCTCGTTTCTTCC
ACTGATTTTACTCCCTTGCCCTCCCCTCTTTCCCCGTCCTTTGATCAAGATTTCAACCTTTTTGATTCGCTTGAAGATTTGCTAGAAGAACCACCCACATTATCTTTATC
TCCTCCTGTTATTAATATTTCTCCCTCACCTTCCCCTCCTCCCTCGCCTTTGCCAGTACCGCAACCCATTTTCAGAGTTCCTCCCTCCCCATTTCGTATGCTGAATACGC
AAATTCCGCCCAGTTTCAACACTCATCTGGCTCCTATGCTCTTCCCACCCAATCATTTTCCCCCACAACAACAGTAA
Protein sequenceShow/hide protein sequence
MSSSKFPPSDEGTKQGLQISNNSRKIKKPPLPKKRAAPVVKYESEPRVIKVQTPTDFTYIVQLLTGDPKRPPPLYPCNCDHDNNNPQHPDDRPQGILSPTPTSLPPLVSS
TDFTPLPSPLSPSFDQDFNLFDSLEDLLEEPPTLSLSPPVINISPSPSPPPSPLPVPQPIFRVPPSPFRMLNTQIPPSFNTHLAPMLFPPNHFPPQQQ