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PI0014629 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014629
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionValyl-tRNA synthetase
Genome locationchr12:22150433..22153904
RNA-Seq ExpressionPI0014629
SyntenyPI0014629
Gene Ontology termsGO:0006438 - valyl-tRNA aminoacylation (biological process)
GO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process)
GO:0005829 - cytosol (cellular component)
GO:0002161 - aminoacyl-tRNA editing activity (molecular function)
GO:0004832 - valine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR002300 - Aminoacyl-tRNA synthetase, class Ia
IPR002303 - Valine-tRNA ligase
IPR014729 - Rossmann-like alpha/beta/alpha sandwich fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605705.1 Valine--tRNA ligase, mitochondrial 1, partial [Cucurbita argyrosperma subsp. sororia]9.3e-2678.87Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        ++G+YRGAKDNEM LGLCSR+N VVEPMI PQWY NCKD++KQSLDAV+DNEC+K+EIIPKQY ADWKR L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

KAG7035615.1 Valine--tRNA ligase, mitochondrial 1 [Cucurbita argyrosperma subsp. argyrosperma]9.3e-2678.87Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        ++G+YRGAKDNEM LGLCSR+N VVEPMI PQWY NCKD++KQSLDAV+DNEC+K+EIIPKQY ADWKR L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

XP_022957953.1 valine--tRNA ligase, mitochondrial 1 isoform X1 [Cucurbita moschata]1.2e-2578.87Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        ++G+YRGAKDNEM LGLCSR+N VVEPMI PQWY NCKD++KQSLDAV DNEC+K+EIIPKQY ADWKR L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

XP_022957954.1 valine--tRNA ligase, mitochondrial 1 isoform X2 [Cucurbita moschata]1.2e-2578.87Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        ++G+YRGAKDNEM LGLCSR+N VVEPMI PQWY NCKD++KQSLDAV DNEC+K+EIIPKQY ADWKR L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

XP_023533939.1 valine--tRNA ligase, mitochondrial 1 [Cucurbita pepo subsp. pepo]1.2e-2578.87Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        ++G+YRGAKDNEM LGLCSR+N VVEPMI PQWY NCKD++KQSLDAV DNEC+K+EIIPKQY ADWKR L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

TrEMBL top hitse value%identityAlignment
A0A0A0KPW4 Valyl-tRNA synthetase8.5e-2576.06Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        ++G+YRGAKDNEM LGLCSRTN VVEPMI PQWY NCK+ +KQSLDA +DNEC+K++IIPKQY ADWKR L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

A0A5D3BM83 Valyl-tRNA synthetase8.5e-2576.06Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        ++G+YRGAKDNEM LGLCSRTN VVEPMI PQWY NCK+ +KQSLDA +DNEC+K++IIPKQY ADWKR L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

A0A6J1H1R1 Valyl-tRNA synthetase5.9e-2678.87Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        ++G+YRGAKDNEM LGLCSR+N VVEPMI PQWY NCKD++KQSLDAV DNEC+K+EIIPKQY ADWKR L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

A0A6J1H3K8 Valyl-tRNA synthetase5.9e-2678.87Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        ++G+YRGAKDNEM LGLCSR+N VVEPMI PQWY NCKD++KQSLDAV DNEC+K+EIIPKQY ADWKR L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

A0A6J1JYM1 Valyl-tRNA synthetase1.7e-2577.46Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        ++G+YRGAKDNEM LGLCSR+N VVEPMI PQWY NCKD++KQSLDAV DNEC+K++IIPKQY ADWKR L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

SwissProt top hitse value%identityAlignment
P46216 Valine--tRNA ligase (Fragment)1.1e-1036.36Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKLRKAYINMWKRNPMVCCI
        E G+Y+  KD+EM LG+  R + +VE +I PQW+ N  D++ +++ AV D E   L+I+P +++ DWK+         W  N    CI
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKLRKAYINMWKRNPMVCCI

P93736 Valine--tRNA ligase, mitochondrial 12.9e-2263.38Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        +QG+YRGAK+NEM LGLCSRTN V+EPMI PQWY NC  I K++LD  + +E +KLE +PKQY A+W+R L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

Q04462 Valine--tRNA ligase9.7e-1040.3Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADW
        EQG++RG KDN M + LC+R+  VVEP++ PQWY  C ++++ +  AV   +   L I+P+ +   W
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADW

Q86KU2 Probable valine--tRNA ligase, cytoplasmic1.6e-1246.48Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        E+ +++G KDN+M LGLCSR+  V+EPMI PQWY  C D++ +++ AV D +   L+I PK +   W R L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL

Q9U1Q4 Valine--tRNA ligase5.1e-1139.19Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKLRKA
        E+G+YRG +DN M +  CSR+  V+EP++ PQWY  C  ++++++ AV + +   L+IIP+ + A W R L  +
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKLRKA

Arabidopsis top hitse value%identityAlignment
AT1G14610.1 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)2.1e-2363.38Show/hide
Query:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL
        +QG+YRGAK+NEM LGLCSRTN V+EPMI PQWY NC  I K++LD  + +E +KLE +PKQY A+W+R L
Subjt:  EQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQWYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGATGAGACTGAAACCAAGCAAGGCCAAGGGCAGGAACTCCACCACCAGGAACCCTATCATCAACCAATAGGCCAGGAGCGGAAACGGAAGCTGAGGGGCTCTCA
TAAGAATCCAACTAGAAAGCAGTTCTTGCTCAGGTTTCAGGAATCCATAAAAAGCCCAGGTCACAAGATCTTTTTACGTCCCCCTGGAAGAGGTTTATATCCACCAGCTT
ATATTCTGCAGTGCGAACAGGGTATTTATAGAGGTGCTAAAGACAATGAGATGTGCCTTGGCCTTTGTTCAAGGACCAATGCTGTTGTGGAGCCAATGATAAATCCTCAA
TGGTATGCTAATTGTAAAGATATCTCAAAACAGAGTCTTGACGCTGTCGTGGACAATGAATGCAGAAAGCTTGAGATCATACCAAAACAATATTTAGCTGACTGGAAGAG
AAAGCTAAGGAAAGCCTACATCAACATGTGGAAAAGGAATCCAATGGTTTGTTGCATCCAAACGATCTCGTTTGTGGTTCCCGAGCATTCTCTTGGAAGATACTCTATAG
AATGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGATGAGACTGAAACCAAGCAAGGCCAAGGGCAGGAACTCCACCACCAGGAACCCTATCATCAACCAATAGGCCAGGAGCGGAAACGGAAGCTGAGGGGCTCTCA
TAAGAATCCAACTAGAAAGCAGTTCTTGCTCAGGTTTCAGGAATCCATAAAAAGCCCAGGTCACAAGATCTTTTTACGTCCCCCTGGAAGAGGTTTATATCCACCAGCTT
ATATTCTGCAGTGCGAACAGGGTATTTATAGAGGTGCTAAAGACAATGAGATGTGCCTTGGCCTTTGTTCAAGGACCAATGCTGTTGTGGAGCCAATGATAAATCCTCAA
TGGTATGCTAATTGTAAAGATATCTCAAAACAGAGTCTTGACGCTGTCGTGGACAATGAATGCAGAAAGCTTGAGATCATACCAAAACAATATTTAGCTGACTGGAAGAG
AAAGCTAAGGAAAGCCTACATCAACATGTGGAAAAGGAATCCAATGGTTTGTTGCATCCAAACGATCTCGTTTGTGGTTCCCGAGCATTCTCTTGGAAGATACTCTATAG
AATGGAAATGA
Protein sequenceShow/hide protein sequence
MRDETETKQGQGQELHHQEPYHQPIGQERKRKLRGSHKNPTRKQFLLRFQESIKSPGHKIFLRPPGRGLYPPAYILQCEQGIYRGAKDNEMCLGLCSRTNAVVEPMINPQ
WYANCKDISKQSLDAVVDNECRKLEIIPKQYLADWKRKLRKAYINMWKRNPMVCCIQTISFVVPEHSLGRYSIEWK