; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014681 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014681
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibosome hibernation promotion factor
Genome locationchr11:30904750..30908451
RNA-Seq ExpressionPI0014681
SyntenyPI0014681
Gene Ontology termsGO:0045900 - negative regulation of translational elongation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0043022 - ribosome binding (molecular function)
GO:0043024 - ribosomal small subunit binding (molecular function)
InterPro domainsIPR003489 - Ribosome hibernation promoting factor/RaiA
IPR032528 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal
IPR034694 - Ribosome hibernation promoting factor, long/plastid
IPR036567 - Ribosome hibernation promotion factor-like
IPR038416 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147328.1 ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus]1.5e-16398.06Show/hide
Query:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSLSPP  SSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRM+WDGPLSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVT+
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  ETAREPSLAE
        E  REPSLAE
Subjt:  ETAREPSLAE

XP_008460813.1 PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo]1.0e-16197.74Show/hide
Query:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSL PP PSSSTVSYFPA FSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRM+WDG LSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  ETAREPSLAE
        E AREPSLAE
Subjt:  ETAREPSLAE

XP_022922607.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]3.3e-13986.12Show/hide
Query:  MATLTSSMQANLLSDHSLSP--PIPSSSTVSYFPASFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMSWDGPLSSVKLI
        MA LTSSMQ NLLS HSL+P     SSSTVS FP SFSL    + + LK HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRMSWDGPLSSVKLI
Subjt:  MATLTSSMQANLLSDHSLSP--PIPSSSTVSYFPASFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMSWDGPLSSVKLI

Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR
        VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE
        GRH+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AE
Subjt:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE

Query:  KLEPVTVETAREPSLAE
        K+E VTVE ARE SLAE
Subjt:  KLEPVTVETAREPSLAE

XP_023551717.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]1.3e-14086.35Show/hide
Query:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQ
        MA LTSSMQ NLLS HSL+P   SS+TVS FP SFSL    + + LK+HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRMSWDGPLSSVKLIVQ
Subjt:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQ

Query:  GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGR
        GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD GR
Subjt:  GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGR

Query:  HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKL
        H+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AEK+
Subjt:  HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKL

Query:  EPVTVETAREPSLAE
        E VTVE ARE SLAE
Subjt:  EPVTVETAREPSLAE

XP_038900446.1 ribosome-binding factor PSRP1, chloroplastic [Benincasa hispida]4.7e-14689.46Show/hide
Query:  MATLTSSMQANLLSDHSL-SPPIPSSSTVSYFPASFSLHFSALKVHAL--SSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGK
        MA LTSSM  +LL DHSL S    SSST+S+FPASFSLHFSALKVHAL  SS ASAFFNSCK+F T ETASRNRHASNSF++RMSWDGPLSSVKLIVQ K
Subjt:  MATLTSSMQANLLSDHSL-SPPIPSSSTVSYFPASFSLHFSALKVHAL--SSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGK

Query:  NLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHV
        NLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH+
Subjt:  NLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHV

Query:  KGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP
        KGFDRSKVREPAPIVVEDE+EEVF+ED GEVIDEIVR KYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLE 
Subjt:  KGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP

Query:  VTVETAREPSLAE
        VT++ AREPSLAE
Subjt:  VTVETAREPSLAE

TrEMBL top hitse value%identityAlignment
A0A1S3CCT7 ribosome-binding factor PSRP1, chloroplastic5.1e-16297.74Show/hide
Query:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSL PP PSSSTVSYFPA FSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRM+WDG LSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  ETAREPSLAE
        E AREPSLAE
Subjt:  ETAREPSLAE

A0A5D3BQR1 Ribosome-binding factor PSRP15.1e-16297.74Show/hide
Query:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSL PP PSSSTVSYFPA FSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRM+WDG LSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  ETAREPSLAE
        E AREPSLAE
Subjt:  ETAREPSLAE

A0A6J1CJG5 ribosome-binding factor PSRP1, chloroplastic1.0e-13886.71Show/hide
Query:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSL----HFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQG
        MATLTSSM  NLLS  S      SSST S FPASFSL    + SALK+H LSS+ S FFNSC  F TI+ A RNRHA+NSF+IRMSWDGPLSSVKLIVQG
Subjt:  MATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSL----HFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQG

Query:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRH
        KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVR EEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH
Subjt:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRH

Query:  VKGFDRSKVREPAPIVVED--EEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEK
        +KGFDR KVREPAPIVVED  EEEEV  ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK
Subjt:  VKGFDRSKVREPAPIVVED--EEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEK

Query:  LEPVTVETAREPSLAE
        LEPVTVE AREPSLAE
Subjt:  LEPVTVETAREPSLAE

A0A6J1E3S3 ribosome-binding factor PSRP1, chloroplastic1.6e-13986.12Show/hide
Query:  MATLTSSMQANLLSDHSLSP--PIPSSSTVSYFPASFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMSWDGPLSSVKLI
        MA LTSSMQ NLLS HSL+P     SSSTVS FP SFSL    + + LK HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRMSWDGPLSSVKLI
Subjt:  MATLTSSMQANLLSDHSLSP--PIPSSSTVSYFPASFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMSWDGPLSSVKLI

Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR
        VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE
        GRH+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AE
Subjt:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE

Query:  KLEPVTVETAREPSLAE
        K+E VTVE ARE SLAE
Subjt:  KLEPVTVETAREPSLAE

A0A6J1J523 ribosome-binding factor PSRP1, chloroplastic3.4e-13485.62Show/hide
Query:  ANLLSDHSLSPPIPSSSTVSYFPASFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLELTEA
        A+L    S S    SSSTVS FP SFSL    + + LK+HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRMSWDGPLSSVKLIVQGKNLELTEA
Subjt:  ANLLSDHSLSPPIPSSSTVSYFPASFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLELTEA

Query:  VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSK
        VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD GRH+KGFDRSK
Subjt:  VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSK

Query:  VREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVETAR
        +REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK+E VTVE AR
Subjt:  VREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVETAR

Query:  EPSLAE
        E SLAE
Subjt:  EPSLAE

SwissProt top hitse value%identityAlignment
P19954 Ribosome-binding factor PSRP1, chloroplastic5.0e-9058.93Show/hide
Query:  MATL-TSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNL
        MATL TS++  N    +SLS  I  SST +                 LSS  S F NSC     +   S     +    + MSWDGPLSSVKLI+QG+NL
Subjt:  MATL-TSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNL

Query:  ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKG
        E+++ V+ HVE+KVGK+V KHSHLVREVDVRLS RGG+  KGP++RRCEVTLFTK+HGV+RAEEDAE++++SIDLVSSIIQRKLRKIK+K SD GRH+KG
Subjt:  ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKG

Query:  FDRSKVREPAPIVVEDEE--EEV------FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT
        F+RSKVR+P P+ +  EE  EEV         +  + I+E+VRTKYFDMPPLT+ EA+EQL+N+DHDFY FRNEETG+INILYKRK+GGYGLIIPK+ G 
Subjt:  FDRSKVREPAPIVVEDEE--EEV------FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGT

Query:  AEKLEPVTVETAREPSLAE
         EKLE + V+T ++PS AE
Subjt:  AEKLEPVTVETAREPSLAE

P47908 Ribosome hibernation promotion factor2.4e-3140.4Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK
        +KL++QG N+ +TE++  +VE K+ KA +       +VDV LSV      +     + EVT++     V+RA+E +E ++ASIDLVS  I R+LRK KEK
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
        +  +  HV    + K  E  P   +   + +  +   E+  E+VR KYF MPP+T++EA+EQL+ +DHDFY F N++T  IN++Y R  GGYG+I P+
Subjt:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

P74518 Ribosome hibernation promotion factor3.0e-3442.86Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKI
        +KL++QG N+ +TEA+  +VEEKV +AV+   +L  +VDV LSV      +  RI    + EVT++     V+RA+E +E ++ASIDLV+  I R+LRK 
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKI

Query:  KEKDSDRGR-HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLII
        KE+  D+   +VK    S++ E  P+     EE +  +   E+  E++R KYF MPP+ +E+A+EQL+ +DHDFY FRN++T EIN++Y R  GGYG+I 
Subjt:  KEKDSDRGR-HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLII

Query:  PKE
        P +
Subjt:  PKE

Q49VV1 Ribosome hibernation promotion factor4.6e-1932.99Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK
        ++  + G+NL +T+A++ ++EEK+GK ++++ + V      + V+  +        + EVT+  KK   +RAEE  + ++A IDL+++ ++R++RK K +
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVID--EIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
         + R R+ +G   +    P     E++E    Q D  E  +  EI+R K F + P+  EEA+ Q+  + HDF+ F + ET   +I+YKRKDG YGLI
Subjt:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVID--EIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Q9RVE7 Ribosome hibernation promotion factor3.5e-1932.99Show/hide
Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKE---KD
        + G+N+E+TE ++++VEEK+ + + +++  + +  V L+VR  +     R  R EV L     G++RAEE    ++A+ID  S +++R+LRK K    K 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKE---KD

Query:  SDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
           GR         +  PA   V  +      +D  E   EIVR K F++ P++ E+A+ Q++ + HDFY F++ + G+  ++Y+R+DG YGLI
Subjt:  SDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Arabidopsis top hitse value%identityAlignment
AT5G24490.1 30S ribosomal protein, putative5.7e-9772.58Show/hide
Query:  RNRHASNSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV
        R+ +  +S +++MSWDGPL+SVKLI+QGKNLEL+E +K+HVEEKVGK+VQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV
Subjt:  RNRHASNSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETV

Query:  FASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPA-PIVVEDEEEEV-----FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGF
        +A IDLVS+IIQRKLRKIKEKDSD GRH+KGF+R KVREP    VVED E+        +E+  ++I EIVRTK F+MPPLTV EA+EQL+ + HDFYGF
Subjt:  FASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPA-PIVVEDEEEEV-----FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGF

Query:  RNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVETAREPSLAE
        +NEETGEINI+YKRK+GGYGLIIPK++G AEK+EP+  E   E S AE
Subjt:  RNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVETAREPSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGCTTAATGCTTAGTTCAAGTTACATACCCTCTTTGACAAATATCAAAGGGAAAAAAAAAGACAAAAAACAGGCATTGGCTTGGCATCAACATCATCCAGAGAA
AAGAAAGAAAAGCCGCGCGGTTTGTTTATCCACTTGTTTCCCTTGTTATCTTCATCAATTCCAAGTTTTGAACTCAACAATGGCGACTCTCACCTCTTCCATGCAGGCCA
ATCTTCTTTCTGATCACTCCTTATCTCCTCCTATCCCTTCTTCTTCTACCGTTTCTTACTTTCCTGCTTCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTT
TCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCTCAAACTCTTTCAGTATTCGGATGTCCTGGGA
CGGCCCCCTCTCCTCTGTCAAATTAATTGTCCAAGGCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCACGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACA
GTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCCAAGGATTAGAAGATGCGAGGTCACTTTATTCACAAAGAAGCATGGA
GTTGTACGGGCAGAGGAAGATGCTGAGACTGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCGTGG
CCGACACGTGAAAGGATTTGACAGATCAAAAGTTAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCAAGAAGATGGTGGAGAAGTTATTGACG
AGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACT
GGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGAAATTAGAGCCTGTGACAGTTGAAACAGCCAG
AGAACCATCCTTGGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
CTCTTTCATACATTGATATGCCTTGCTTAATGCTTAGTTCAAGTTACATACCCTCTTTGACAAATATCAAAGGGAAAAAAAAAGACAAAAAACAGGCATTGGCTTGGCAT
CAACATCATCCAGAGAAAAGAAAGAAAAGCCGCGCGGTTTGTTTATCCACTTGTTTCCCTTGTTATCTTCATCAATTCCAAGTTTTGAACTCAACAATGGCGACTCTCAC
CTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTATCTCCTCCTATCCCTTCTTCTTCTACCGTTTCTTACTTTCCTGCTTCCTTCTCTCTTCACTTCTCTGCGC
TCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCTCAAACTCTTTCAGT
ATTCGGATGTCCTGGGACGGCCCCCTCTCCTCTGTCAAATTAATTGTCCAAGGCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCACGTGGAAGAGAAGGTTGGCAA
GGCAGTCCAGAAGCACAGTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCCAAGGATTAGAAGATGCGAGGTCACTTTAT
TCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACTGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAG
AAAGATTCAGACCGTGGCCGACACGTGAAAGGATTTGACAGATCAAAAGTTAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCAAGAAGATGG
TGGAGAAGTTATTGACGAGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCATGATTTCTATGGTT
TCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGAAATTAGAGCCTGTG
ACAGTTGAAACAGCCAGAGAACCATCCTTGGCGGAATGATGAGAATTCACGGAGGAAAGTTTCATGTTCAGGATATCTTACCACTGTTACCTTTGCTTAAAACTTCAAAA
CTTCGACTTCAACATGCATCTGAAGGCCTTTCTTGTAGAGAGTATATAGATTTAGATTTGAGGCTATTTGGTGATGATGACAATATTGGAACAAGAAATGAGTAACAAGT
AAAATAAGATGCAAAATATTCTAATGAATGAATGATTCAGCTTGCTGGGGTATTACCATGAAAA
Protein sequenceShow/hide protein sequence
MPCLMLSSSYIPSLTNIKGKKKDKKQALAWHQHHPEKRKKSRAVCLSTCFPCYLHQFQVLNSTMATLTSSMQANLLSDHSLSPPIPSSSTVSYFPASFSLHFSALKVHAL
SSNASAFFNSCKNFGTIETASRNRHASNSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHG
VVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEET
GEINILYKRKDGGYGLIIPKENGTAEKLEPVTVETAREPSLAE