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PI0014709 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014709
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr05:14994129..14994632
RNA-Seq ExpressionPI0014709
SyntenyPI0014709
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033652.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-3752.69Show/hide
Query:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF
        MDFL  ++A +D+  K+VV ++PG  EV F   +KV   S+I +LKA KL++KG T +LA I                         +++GLPP REIEF
Subjt:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF

Query:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
        TIE++PRT PISQ PYRMAPSELK+LK QL+EL++KGYIRPS SPWG   LF+KKKDG +R CIDYR
Subjt:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

KAA0054081.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.3e-3753.89Show/hide
Query:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF
        MDFL  ++A +D   K+VV  +PG  EV F   +K    S+ISILKA KL+KKG TA+LA I                         +++GLPP REIEF
Subjt:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF

Query:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
        TIE++P T PISQ PYRMAPSELK+LK QL+EL++KGYIRPS SPWG   LF+KKKDG +R CIDYR
Subjt:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

KAA0059911.1 reverse transcriptase [Cucumis melo var. makuwa]1.8e-3752.69Show/hide
Query:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF
        MDFL  ++A +D   K+VV ++PG  EV F   +K    S+IS+LKA KL++KG TA+LA I                         +++GLPP REIEF
Subjt:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF

Query:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
        TIE++P TTPISQ PYRMAPSELK+LK QL+EL++KGYIRPS SPWG   LF+KKKDG +R CIDY+
Subjt:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

TYJ98703.1 reverse transcriptase [Cucumis melo var. makuwa]2.1e-3861.27Show/hide
Query:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARIEMNGLPPKREIEFTIEVVPRTTPISQTPYRMAPSELKQ
        MDFL  ++A +D+  KKVV ++PG  EV F   +K    S+IS LKA KL++KG TA+LA I + GLPP REIEFTIE++  T PISQ PYRMAPSELK+
Subjt:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARIEMNGLPPKREIEFTIEVVPRTTPISQTPYRMAPSELKQ

Query:  LKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
         K QL+EL++KGYIRPS SPWG   LF+KKKDG +R CIDYR
Subjt:  LKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

TYK22952.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-3752.69Show/hide
Query:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF
        MDFL  ++A +D+  K+VV ++PG  EV F   +KV   S+I +LKA KL++KG T +LA I                         +++GLPP REIEF
Subjt:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF

Query:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
        TIE++PRT PISQ PYRMAPSELK+LK QL+EL++KGYIRPS SPWG   LF+KKKDG +R CIDYR
Subjt:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

TrEMBL top hitse value%identityAlignment
A0A5A7SR31 DNA/RNA polymerases superfamily protein5.1e-3852.69Show/hide
Query:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF
        MDFL  ++A +D+  K+VV ++PG  EV F   +KV   S+I +LKA KL++KG T +LA I                         +++GLPP REIEF
Subjt:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF

Query:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
        TIE++PRT PISQ PYRMAPSELK+LK QL+EL++KGYIRPS SPWG   LF+KKKDG +R CIDYR
Subjt:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

A0A5A7UKK4 Reverse transcriptase1.1e-3753.89Show/hide
Query:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF
        MDFL  ++A +D   K+VV  +PG  EV F   +K    S+ISILKA KL+KKG TA+LA I                         +++GLPP REIEF
Subjt:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF

Query:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
        TIE++P T PISQ PYRMAPSELK+LK QL+EL++KGYIRPS SPWG   LF+KKKDG +R CIDYR
Subjt:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

A0A5A7V2E0 Reverse transcriptase8.7e-3852.69Show/hide
Query:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF
        MDFL  ++A +D   K+VV ++PG  EV F   +K    S+IS+LKA KL++KG TA+LA I                         +++GLPP REIEF
Subjt:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF

Query:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
        TIE++P TTPISQ PYRMAPSELK+LK QL+EL++KGYIRPS SPWG   LF+KKKDG +R CIDY+
Subjt:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

A0A5D3BHG0 Reverse transcriptase1.0e-3861.27Show/hide
Query:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARIEMNGLPPKREIEFTIEVVPRTTPISQTPYRMAPSELKQ
        MDFL  ++A +D+  KKVV ++PG  EV F   +K    S+IS LKA KL++KG TA+LA I + GLPP REIEFTIE++  T PISQ PYRMAPSELK+
Subjt:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARIEMNGLPPKREIEFTIEVVPRTTPISQTPYRMAPSELKQ

Query:  LKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
         K QL+EL++KGYIRPS SPWG   LF+KKKDG +R CIDYR
Subjt:  LKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

A0A5D3DHC6 Reverse transcriptase5.1e-3852.69Show/hide
Query:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF
        MDFL  ++A +D+  K+VV ++PG  EV F   +KV   S+I +LKA KL++KG T +LA I                         +++GLPP REIEF
Subjt:  MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARI-------------------------EMNGLPPKREIEF

Query:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
        TIE++PRT PISQ PYRMAPSELK+LK QL+EL++KGYIRPS SPWG   LF+KKKDG +R CIDYR
Subjt:  TIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

SwissProt top hitse value%identityAlignment
Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein2.7e-0430Show/hide
Query:  EMNGLPPKREIEFTIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
        ++N +P K +    IE+ P        PY +     +++ + +++LL+  +I PS SP     + + KKDG  R C+DYR
Subjt:  EMNGLPPKREIEFTIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

Q99315 Transposon Ty3-G Gag-Pol polyprotein2.7e-0430Show/hide
Query:  EMNGLPPKREIEFTIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR
        ++N +P K +    IE+ P        PY +     +++ + +++LL+  +I PS SP     + + KKDG  R C+DYR
Subjt:  EMNGLPPKREIEFTIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLEKGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTCTCACCAAGTATCACGCGGTGTTGGATTACTCCAATAAGAAGGTAGTATTGCAAGAGCCAGGGAAATTTGAAGTTGAATTTGTAAACGCCAAGAAAGTGGA
ACTCGCAAGTATGATATCAATACTTAAGGCGAGGAAATTGATTAAGAAGGGGCATACTGCCTACCTTGCTCGCATAGAAATGAATGGATTACCCCCAAAAAGGGAGATTG
AGTTTACAATTGAAGTTGTGCCTAGAACAACACCAATTTCTCAAACCCCTTATCGTATGGCACCTAGCGAGCTGAAGCAGCTAAAGGAACAATTGGAGGAATTATTAGAG
AAGGGTTATATTCGACCTAGTACCTCACCTTGGGGAGTCTTTTTTCTATTTATGAAAAAGAAAGATGGATTTATGAGGCGTTGTATTGATTACCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTCTCACCAAGTATCACGCGGTGTTGGATTACTCCAATAAGAAGGTAGTATTGCAAGAGCCAGGGAAATTTGAAGTTGAATTTGTAAACGCCAAGAAAGTGGA
ACTCGCAAGTATGATATCAATACTTAAGGCGAGGAAATTGATTAAGAAGGGGCATACTGCCTACCTTGCTCGCATAGAAATGAATGGATTACCCCCAAAAAGGGAGATTG
AGTTTACAATTGAAGTTGTGCCTAGAACAACACCAATTTCTCAAACCCCTTATCGTATGGCACCTAGCGAGCTGAAGCAGCTAAAGGAACAATTGGAGGAATTATTAGAG
AAGGGTTATATTCGACCTAGTACCTCACCTTGGGGAGTCTTTTTTCTATTTATGAAAAAGAAAGATGGATTTATGAGGCGTTGTATTGATTACCGATAA
Protein sequenceShow/hide protein sequence
MDFLTKYHAVLDYSNKKVVLQEPGKFEVEFVNAKKVELASMISILKARKLIKKGHTAYLARIEMNGLPPKREIEFTIEVVPRTTPISQTPYRMAPSELKQLKEQLEELLE
KGYIRPSTSPWGVFFLFMKKKDGFMRRCIDYR