CuGenDBv2

Gene ID	PI0014747
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Zf-RVT domain-containing protein
Genome location	chr01:14965906..14966690
RNA-Seq Expression	PI0014747
Synteny	PI0014747
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]

5.1e-43

44.95

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Query:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI
        M+VG+G  C VWLD WL GGAI+ Q+GERV+YDAASRREARLS+FI  +GEW WPRVS EL +LWERVQ + PCLS+ D WVWVPGRQG FSI+SAWEAI
Subjt:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI

Query:  RPRREK--------------------------------------------------------------------------NEQNRRLHGGAAREPDILIQ
         PR  +                                                                          NE+N RLHGG AR+P IL  
Subjt:  RPRREK--------------------------------------------------------------------------NEQNRRLHGGAAREPDILIQ

Query:  CIRSTVRARAVSWQEDVH
         I + +RARA SW+ED H
Subjt:  CIRSTVRARAVSWQEDVH

KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]

2.2e-38

71.84

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Query:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI
        +EVGDG  C VWLD WL G  I+ Q+GERV+YDAASRREARLSEFIG DGEW+WPRVS EL +LW+RVQ +RPCLS+ D WVWVPG QG FSI+SA + I
Subjt:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI

Query:  RPR
        RPR
Subjt:  RPR

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]

7.1e-37

64.66

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Query:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI
        M+VG+G    VWLD WL  GAI+ Q+GERV+YDAASRR+ARLS+FI  DGEW WPRVS EL +LWERVQ + PCLS+ D WVWVPGR+G FSI+SAWEA+
Subjt:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI

Query:  RPRREKNEQNRRLHGG
        RPR  +   +  L GG
Subjt:  RPRREKNEQNRRLHGG

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]

1.1e-42

44.5

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Query:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI
        M+VG+G  C VWLD WL GGAI+ Q+GERV+YDAASRREARLS+FI  +GEW WPRVS EL +LWERVQ + PCL++ D WVWVPGRQG FSI+SAWEAI
Subjt:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI

Query:  RPRREK--------------------------------------------------------------------------NEQNRRLHGGAAREPDILIQ
         PR  +                                                                          NE+N RLHGG AR+P IL  
Subjt:  RPRREK--------------------------------------------------------------------------NEQNRRLHGGAAREPDILIQ

Query:  CIRSTVRARAVSWQEDVH
         I + +RARA SW+ED H
Subjt:  CIRSTVRARAVSWQEDVH

TYK26659.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]

1.5e-39

47.85

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Query:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI
        M+VG+G    VWLD WL  GAI+ Q+GERV+YDAASRR+ARLS+FI  DGEW WPRVS EL +LWERVQ + PCLS+ D WVWVPGR+G FSI+SAWEA+
Subjt:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI

Query:  RPRREKNEQNRRLHGGA------------------------------------------AREPDILIQCIRSTVRARAVSWQEDVH
        RPR  +   +  L GG                                           AR+P +L   I S +RARA SW++D H
Subjt:  RPRREKNEQNRRLHGGA------------------------------------------AREPDILIQCIRSTVRARAVSWQEDVH

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T440 Zf-RVT domain-containing protein

2.4e-43

44.95

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Query:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI
        M+VG+G  C VWLD WL GGAI+ Q+GERV+YDAASRREARLS+FI  +GEW WPRVS EL +LWERVQ + PCLS+ D WVWVPGRQG FSI+SAWEAI
Subjt:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI

Query:  RPRREK--------------------------------------------------------------------------NEQNRRLHGGAAREPDILIQ
         PR  +                                                                          NE+N RLHGG AR+P IL  
Subjt:  RPRREK--------------------------------------------------------------------------NEQNRRLHGGAAREPDILIQ

Query:  CIRSTVRARAVSWQEDVH
         I + +RARA SW+ED H
Subjt:  CIRSTVRARAVSWQEDVH

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein

1.1e-38

71.84

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Query:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI
        +EVGDG  C VWLD WL G  I+ Q+GERV+YDAASRREARLSEFIG DGEW+WPRVS EL +LW+RVQ +RPCLS+ D WVWVPG QG FSI+SA + I
Subjt:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI

Query:  RPR
        RPR
Subjt:  RPR

A0A5A7V3Z0 Reverse transcriptase domain-containing protein

3.4e-37

64.66

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Query:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI
        M+VG+G    VWLD WL  GAI+ Q+GERV+YDAASRR+ARLS+FI  DGEW WPRVS EL +LWERVQ + PCLS+ D WVWVPGR+G FSI+SAWEA+
Subjt:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI

Query:  RPRREKNEQNRRLHGG
        RPR  +   +  L GG
Subjt:  RPRREKNEQNRRLHGG

A0A5D3BDZ6 Zf-RVT domain-containing protein

5.5e-43

44.5

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Query:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI
        M+VG+G  C VWLD WL GGAI+ Q+GERV+YDAASRREARLS+FI  +GEW WPRVS EL +LWERVQ + PCL++ D WVWVPGRQG FSI+SAWEAI
Subjt:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI

Query:  RPRREK--------------------------------------------------------------------------NEQNRRLHGGAAREPDILIQ
         PR  +                                                                          NE+N RLHGG AR+P IL  
Subjt:  RPRREK--------------------------------------------------------------------------NEQNRRLHGGAAREPDILIQ

Query:  CIRSTVRARAVSWQEDVH
         I + +RARA SW+ED H
Subjt:  CIRSTVRARAVSWQEDVH

A0A5D3DT54 Zf-RVT domain-containing protein

7.4e-40

47.85

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Query:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI
        M+VG+G    VWLD WL  GAI+ Q+GERV+YDAASRR+ARLS+FI  DGEW WPRVS EL +LWERVQ + PCLS+ D WVWVPGR+G FSI+SAWEA+
Subjt:  MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAI

Query:  RPRREKNEQNRRLHGGA------------------------------------------AREPDILIQCIRSTVRARAVSWQEDVH
        RPR  +   +  L GG                                           AR+P +L   I S +RARA SW++D H
Subjt:  RPRREKNEQNRRLHGGA------------------------------------------AREPDILIQCIRSTVRARAVSWQEDVH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

2.4e-06

33.33

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Query:  VGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRR---EARLSEFIGLDGEWRWP----RVSRELFELWERVQGIRPCLSIGDHWVWVPGR---QGEFS
        +G+GR  H W D W   G +I+ MG+   Y + S R    AR+ E +G++G W+ P      ++ + +    +    P  +I D + WV G    QG FS
Subjt:  VGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRR---EARLSEFIGLDGEWRWP----RVSRELFELWERVQGIRPCLSIGDHWVWVPGR---QGEFS

Query:  ISSAWEAIRPR
         +  W+AIRPR
Subjt:  ISSAWEAIRPR

Sequences

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CDS sequence

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ATGGAGGTTGGTGATGGTAGGTGTTGTCATGTGTGGCTTGACCTTTGGCTGCACGGAGGAGCGATCATTCGGCAAATGGGCGAGCGGGTGGTGTATGATGCTGCGAGTAG
AAGGGAGGCTAGGCTTTCTGAGTTCATTGGCTTGGATGGCGAGTGGAGGTGGCCGAGGGTTTCTAGGGAGTTGTTTGAGTTGTGGGAGAGGGTTCAGGGCATCCGTCCTT
GTTTGAGTATTGGGGATCACTGGGTGTGGGTTCCGGGTCGTCAGGGTGAGTTCTCGATTTCGAGTGCGTGGGAGGCTATTCGTCCTAGGAGAGAAAAGAATGAGCAGAAT
CGCCGTCTCCATGGTGGTGCTGCTCGTGAGCCCGATATTCTGATTCAGTGTATCCGGTCTACTGTTCGTGCTCGTGCTGTCTCTTGGCAGGAAGATGTTCATGATCTTAT
CTAG

mRNA sequence

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Protein sequence

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MEVGDGRCCHVWLDLWLHGGAIIRQMGERVVYDAASRREARLSEFIGLDGEWRWPRVSRELFELWERVQGIRPCLSIGDHWVWVPGRQGEFSISSAWEAIRPRREKNEQN
RRLHGGAAREPDILIQCIRSTVRARAVSWQEDVHDLI

PI0014747 (gene) of Melon (PI 482460) v1 genome