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PI0014758 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014758
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr07:6157603..6159054
RNA-Seq ExpressionPI0014758
SyntenyPI0014758
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037793.1 uncharacterized protein E6C27_scaffold918G00010 [Cucumis melo var. makuwa]5.9e-5051Show/hide
Query:  MKPSKGEIVIRENPLFDNSTSASNLLKIDSHLEIVSVMMTYVTAEATM----------------------------------------------------
        MK  K  IVI+ENPL+DNS SAS+  K ++H +++SV M  +T EA M                                                    
Subjt:  MKPSKGEIVIRENPLFDNSTSASNLLKIDSHLEIVSVMMTYVTAEATM----------------------------------------------------

Query:  ----------RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETKAKKRDDKEKHRP-TLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRP
                  R DKKE K  K++  S +K+SMVV+TTPLKFS K  E +A+K+DD  K R  TLKERQ+KVYPFPD D+ADMLEQLLEKQLIQL ECKRP
Subjt:  ----------RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETKAKKRDDKEKHRP-TLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRP

Query:  EQAGRVDDLNYCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA
        EQAG+VDDLNYCKYH VISHP+EK F+LKELIL+LAREKKI LD++EVA
Subjt:  EQAGRVDDLNYCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA

KAA0046210.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.6e-4978.42Show/hide
Query:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN
        R+DK E+  TK+I +SVIK+SMVVH TPLK   K  ETK  +K D  EK + TLKERQEKVYPFPD DVADMLEQLLE QLIQLPECKRPEQAG+VDD N
Subjt:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN

Query:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA
        YCKYH VISHPVEKCFVLKELILKLAREKKI LDIDEVA
Subjt:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-4878.42Show/hide
Query:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN
        R+DK E+  TK+I +SVIK+SMVVH TPLK   K  ETK  +K D  EK + TLKERQEKVYPFPD DVADMLEQLLE QLIQLPECKRPEQAG+VDD N
Subjt:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN

Query:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA
        YCKYH VISHPVEKCFVLKELILKLAREKKI LDIDEVA
Subjt:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA

KAA0056617.1 glycosyltransferase family 92 protein [Cucumis melo var. makuwa]9.1e-5157.85Show/hide
Query:  FVPTNKSWEQVMKPSKGEIVIRENPLFDNSTSASNLLKID-SHLEIVSVM----------------MTYVTAE--------ATMRNDKKEIKGTKEIEDS
        F  T   WEQ+ KP KG IVI+ENP  D   S S     +  H  I+SVM                M    A           M +DK E   T++I +S
Subjt:  FVPTNKSWEQVMKPSKGEIVIRENPLFDNSTSASNLLKID-SHLEIVSVM----------------MTYVTAE--------ATMRNDKKEIKGTKEIEDS

Query:  VIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLNYCKYHWVISHPVEKCF
        VIK+SMVVH TPLK   K  ETK  +K DD EK  PTLKERQEKVYPFPD DVADMLEQLL+ QLIQL  CK+PEQAG+VDDLNYCKYH VISHP+ KCF
Subjt:  VIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLNYCKYHWVISHPVEKCF

Query:  VLKELILKLAREKKIMLDIDEVA
        +LKELILKLAREKKI LDIDEVA
Subjt:  VLKELILKLAREKKIMLDIDEVA

TYK14887.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-4878.42Show/hide
Query:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN
        R+DK E+  TK+I +SVIK+SMVVH TPLK   K  ETK  +K D  EK + TLKERQEKVYPFPD DVADMLEQLLE QLIQLPECKRPEQAG+VDD N
Subjt:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN

Query:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA
        YCKYH VISHPVEKCFVLKELILKLAREKKI LDIDEVA
Subjt:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA

TrEMBL top hitse value%identityAlignment
A0A5A7T485 Reverse transcriptase2.9e-5051Show/hide
Query:  MKPSKGEIVIRENPLFDNSTSASNLLKIDSHLEIVSVMMTYVTAEATM----------------------------------------------------
        MK  K  IVI+ENPL+DNS SAS+  K ++H +++SV M  +T EA M                                                    
Subjt:  MKPSKGEIVIRENPLFDNSTSASNLLKIDSHLEIVSVMMTYVTAEATM----------------------------------------------------

Query:  ----------RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETKAKKRDDKEKHRP-TLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRP
                  R DKKE K  K++  S +K+SMVV+TTPLKFS K  E +A+K+DD  K R  TLKERQ+KVYPFPD D+ADMLEQLLEKQLIQL ECKRP
Subjt:  ----------RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETKAKKRDDKEKHRP-TLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRP

Query:  EQAGRVDDLNYCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA
        EQAG+VDDLNYCKYH VISHP+EK F+LKELIL+LAREKKI LD++EVA
Subjt:  EQAGRVDDLNYCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA

A0A5A7TST6 Ty3-gypsy retrotransposon protein4.1e-4978.42Show/hide
Query:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN
        R+DK E+  TK+I +SVIK+SMVVH TPLK   K  ETK  +K D  EK + TLKERQEKVYPFPD DVADMLEQLLE QLIQLPECKRPEQAG+VDD N
Subjt:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN

Query:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA
        YCKYH VISHPVEKCFVLKELILKLAREKKI LDIDEVA
Subjt:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA

A0A5A7URH1 Ty3-gypsy retrotransposon protein5.4e-4978.42Show/hide
Query:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN
        R+DK E+  TK+I +SVIK+SMVVH TPLK   K  ETK  +K D  EK + TLKERQEKVYPFPD DVADMLEQLLE QLIQLPECKRPEQAG+VDD N
Subjt:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN

Query:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA
        YCKYH VISHPVEKCFVLKELILKLAREKKI LDIDEVA
Subjt:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA

A0A5D3CSH0 Ty3-gypsy retrotransposon protein5.4e-4978.42Show/hide
Query:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN
        R+DK E+  TK+I +SVIK+SMVVH TPLK   K  ETK  +K D  EK + TLKERQEKVYPFPD DVADMLEQLLE QLIQLPECKRPEQAG+VDD N
Subjt:  RNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLN

Query:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA
        YCKYH VISHPVEKCFVLKELILKLAREKKI LDIDEVA
Subjt:  YCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA

A0A5D3DL10 Glycosyltransferase family 92 protein4.4e-5157.85Show/hide
Query:  FVPTNKSWEQVMKPSKGEIVIRENPLFDNSTSASNLLKID-SHLEIVSVM----------------MTYVTAE--------ATMRNDKKEIKGTKEIEDS
        F  T   WEQ+ KP KG IVI+ENP  D   S S     +  H  I+SVM                M    A           M +DK E   T++I +S
Subjt:  FVPTNKSWEQVMKPSKGEIVIRENPLFDNSTSASNLLKID-SHLEIVSVM----------------MTYVTAE--------ATMRNDKKEIKGTKEIEDS

Query:  VIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLNYCKYHWVISHPVEKCF
        VIK+SMVVH TPLK   K  ETK  +K DD EK  PTLKERQEKVYPFPD DVADMLEQLL+ QLIQL  CK+PEQAG+VDDLNYCKYH VISHP+ KCF
Subjt:  VIKQSMVVHTTPLKFSPKENETK-AKKRDDKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLNYCKYHWVISHPVEKCF

Query:  VLKELILKLAREKKIMLDIDEVA
        +LKELILKLAREKKI LDIDEVA
Subjt:  VLKELILKLAREKKIMLDIDEVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAACAAGAACAAGGTTTTGTCCCCACAAATAAAAGTTGGGAACAAGTGATGAAACCTTCTAAAGGTGAGATCGTTATTAGAGAGAATCCTTTGTTCGACAATTC
TACTTCTGCTTCTAATCTATTAAAGATAGATTCACACCTTGAGATAGTGTCTGTCATGATGACATATGTAACAGCTGAGGCAACCATGAGGAATGATAAGAAAGAAATCA
AAGGCACTAAAGAGATTGAAGATAGTGTCATCAAACAATCTATGGTCGTCCATACGACCCCACTGAAATTTTCTCCCAAAGAAAATGAGACCAAAGCTAAGAAAAGAGAT
GACAAAGAGAAGCATCGTCCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTTCCCGACTTTGATGTAGCAGACATGTTAGAGCAGTTGCTAGAGAAGCAGCTTAT
TCAACTGCCAGAATGCAAACGACCAGAACAAGCAGGAAGAGTAGATGACCTTAACTACTGCAAGTATCATTGGGTCATTAGTCACCCCGTTGAAAAGTGTTTCGTGTTGA
AGGAGCTGATTTTAAAGTTGGCTCGTGAAAAGAAGATCATGTTGGATATTGATGAAGTAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAAACAAGAACAAGGTTTTGTCCCCACAAATAAAAGTTGGGAACAAGTGATGAAACCTTCTAAAGGTGAGATCGTTATTAGAGAGAATCCTTTGTTCGACAATTC
TACTTCTGCTTCTAATCTATTAAAGATAGATTCACACCTTGAGATAGTGTCTGTCATGATGACATATGTAACAGCTGAGGCAACCATGAGGAATGATAAGAAAGAAATCA
AAGGCACTAAAGAGATTGAAGATAGTGTCATCAAACAATCTATGGTCGTCCATACGACCCCACTGAAATTTTCTCCCAAAGAAAATGAGACCAAAGCTAAGAAAAGAGAT
GACAAAGAGAAGCATCGTCCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTTCCCGACTTTGATGTAGCAGACATGTTAGAGCAGTTGCTAGAGAAGCAGCTTAT
TCAACTGCCAGAATGCAAACGACCAGAACAAGCAGGAAGAGTAGATGACCTTAACTACTGCAAGTATCATTGGGTCATTAGTCACCCCGTTGAAAAGTGTTTCGTGTTGA
AGGAGCTGATTTTAAAGTTGGCTCGTGAAAAGAAGATCATGTTGGATATTGATGAAGTAGCTTAG
Protein sequenceShow/hide protein sequence
MQKQEQGFVPTNKSWEQVMKPSKGEIVIRENPLFDNSTSASNLLKIDSHLEIVSVMMTYVTAEATMRNDKKEIKGTKEIEDSVIKQSMVVHTTPLKFSPKENETKAKKRD
DKEKHRPTLKERQEKVYPFPDFDVADMLEQLLEKQLIQLPECKRPEQAGRVDDLNYCKYHWVISHPVEKCFVLKELILKLAREKKIMLDIDEVA