CuGenDBv2

Gene ID	PI0014815
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Photosystem II reaction center protein Z
Genome location	tig00003741:167716..167904
RNA-Seq Expression	PI0014815
Synteny	PI0014815
Gene Ontology terms	GO:0042549 - photosystem II stabilization (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0009539 - photosystem II reaction center (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009004041.1 photosystem II protein Z [Cucumis hystrix]

4.6e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

YP_009236277.1 photosystem II protein Z [Gynostemma pentaphyllum]

7.9e-22

96.77

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLA+FALIVTSSILLISVP+VFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

YP_009430624.1 photosystem II protein z [Gynostemma cardiospermum]

6.0e-22

98.39

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVP+VFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

YP_009751987.1 photosystem II subunit Z [Cionosicys macranthus]

6.0e-22

98.39

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKN+VFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

YP_010144251.1 photosystem II reaction center Z protein [Poikilospermum lanceolatum]

6.0e-22

98.39

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFL+GILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE03 Photosystem II reaction center protein Z

2.2e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

A0A1X9Q1D6 Photosystem II reaction center protein Z

2.2e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

A0A218KG33 Photosystem II reaction center protein Z

2.2e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

A0A410HF78 Photosystem II reaction center protein Z

2.2e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

A0A6H0EQC4 Photosystem II reaction center protein Z

2.2e-22

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

SwissProt top hits

e value

%identity

Alignment

P56790 Photosystem II reaction center protein Z

3.9e-24

96.77

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI+TSSILLISVPVVFASPDGWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Q09MI1 Photosystem II reaction center protein Z

8.8e-24

96.77

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI TSSILLISVPVVFASPDGWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Q32902 Photosystem II reaction center protein Z

3.0e-24

98.39

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Q4VZN6 Photosystem II reaction center protein Z

6.1e-25

100

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Q5QA82 Photosystem II reaction center protein Z

1.1e-23

95.16

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Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLA+FALI TSSILLISVPVVFASPDGWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00300.1 YCF9

2.8e-25

96.77

Show/hide

Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS
        MTIAFQLAVFALI+TSSILLISVPVVFASPDGWS NKNVVFSGTSLWIGLVFLVGILNSLIS
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Sequences

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CDS sequence

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ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCGTTGTATTTGCTTCTCCTGATGGTTGGTCGGGTAACAA
AAATGTTGTATTTTCCGGTACATCATTATGGATTGGATTAGTCTTTCTGGTGGGTATCCTTAATTCTCTTATCTCTTGA

mRNA sequence

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ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCGTTGTATTTGCTTCTCCTGATGGTTGGTCGGGTAACAA
AAATGTTGTATTTTCCGGTACATCATTATGGATTGGATTAGTCTTTCTGGTGGGTATCCTTAATTCTCTTATCTCTTGA

Protein sequence

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MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

PI0014815 (gene) of Melon (PI 482460) v1 genome