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PI0014828 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014828
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUBA domain-containing protein
Genome locationchr01:21145795..21148044
RNA-Seq ExpressionPI0014828
SyntenyPI0014828
Gene Ontology termsNA
InterPro domainsIPR018997 - PUB domain
IPR036339 - PUB-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033313.1 chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa]1.4e-1182.98Show/hide
Query:  LIQAIDEEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        L   I +EDDAKV+RAFQTLLTYVGNVVKNP EEKFRKI+LSNQTFQ
Subjt:  LIQAIDEEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
XP_008457228.1 PREDICTED: chromatin assembly factor 1 subunit A [Cucumis melo]2.4e-1190.24Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        +EDDAKV+RAFQTLLTYVGNVVKNP EEKFRKI+LSNQTFQ
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
XP_022964544.1 chromatin assembly factor 1 subunit A [Cucurbita moschata]2.4e-1190.24Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        +EDDAKV+RAFQTLLTYVGNVVKNP EEKFRKI+LSNQTFQ
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
XP_023514926.1 chromatin assembly factor 1 subunit A [Cucurbita pepo subsp. pepo]2.4e-1190.24Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        +EDDAKV+RAFQTLLTYVGNVVKNP EEKFRKI+LSNQTFQ
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
XP_038874495.1 chromatin assembly factor 1 subunit A-B [Benincasa hispida]2.4e-1190.24Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        +EDDAKV+RAFQTLLTYVGNVVKNP EEKFRKI+LSNQTFQ
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
TrEMBL top hitse value%identityAlignment
A0A1S3C4L3 chromatin assembly factor 1 subunit A1.1e-1190.24Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        +EDDAKV+RAFQTLLTYVGNVVKNP EEKFRKI+LSNQTFQ
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
A0A5D3DDE6 Chromatin assembly factor 1 subunit A6.7e-1282.98Show/hide
Query:  LIQAIDEEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        L   I +EDDAKV+RAFQTLLTYVGNVVKNP EEKFRKI+LSNQTFQ
Subjt:  LIQAIDEEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
A0A6J1HNI9 chromatin assembly factor 1 subunit A1.1e-1190.24Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        +EDDAKV+RAFQTLLTYVGNVVKNP EEKFRKI+LSNQTFQ
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
A0A6M2EL12 UBA domain-containing protein2.5e-1185.37Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        ++DDAKV+RAFQTLLTYVGNV KNPGEEKFRKI+L+NQTFQ
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
B9IJJ3 UBA domain-containing protein2.5e-1185.37Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        ++DDAKV+RAFQTLLTYVGNV KNPGEEKFRKI+L+NQTFQ
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04850.1 ubiquitin-associated (UBA)/TS-N domain-containing protein3.2e-1482.93Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
        +EDDAKV+RAFQTLLTY+GNV KNP EEKFRKI+L+NQTFQ
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQ
AT5G48690.1 CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060)5.4e-0652.5Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTF
        +ED    RR F+TLLT V NV K P EE++R+I+L N+ F
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTF
AT5G48690.2 FUNCTIONS IN: molecular_function unknown5.4e-0652.5Show/hide
Query:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTF
        +ED    RR F+TLLT V NV K P EE++R+I+L N+ F
Subjt:  EEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGTTCTTCTCCATTTTCCATTTTTCATCTTCCATCTCTTTCGATTCTCTGTCATCTCCTCTCCATCTTCTACTTCGTTCATGTACCATCTTCGCCATTCAC
CCATATATGTTTGCCATTGCAACTCCACCATGATTCAAACATCTTTGTACATTGCGTGCTGATTCAAGCAATTGATGAGGAGGATGATGCTAAAGTGAGGAGAGCATTTC
AAACCCTTCTAACTTATGTGGGAAACGTGGTGAAAAATCCGGGTGAAGAGAAGTTCAGAAAAATCAAACTTAGCAACCAAACTTTTCAGCCTTGCGAGGTTCAAGAGGTT
ACTGCTTTTAATGTTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAAGTTCTTCTCCATTTTCCATTTTTCATCTTCCATCTCTTTCGATTCTCTGTCATCTCCTCTCCATCTTCTACTTCGTTCATGTACCATCTTCGCCATTCAC
CCATATATGTTTGCCATTGCAACTCCACCATGATTCAAACATCTTTGTACATTGCGTGCTGATTCAAGCAATTGATGAGGAGGATGATGCTAAAGTGAGGAGAGCATTTC
AAACCCTTCTAACTTATGTGGGAAACGTGGTGAAAAATCCGGGTGAAGAGAAGTTCAGAAAAATCAAACTTAGCAACCAAACTTTTCAGCCTTGCGAGGTTCAAGAGGTT
ACTGCTTTTAATGTTGGTTAA
Protein sequenceShow/hide protein sequence
MKKSSSPFSIFHLPSLSILCHLLSIFYFVHVPSSPFTHICLPLQLHHDSNIFVHCVLIQAIDEEDDAKVRRAFQTLLTYVGNVVKNPGEEKFRKIKLSNQTFQPCEVQEV
TAFNVG